RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 TSHZ2Q9NRE2 1034 aa22.13■■□□□ 1.13
DDX42-208ENST00000578681 SCAPERQ9BY12 1400 aa22.12■■□□□ 1.13
DDX42-208ENST00000578681 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.11■■□□□ 1.13
DDX42-208ENST00000578681 WASHC2CQ9Y4E1 1318 aa22.11■■□□□ 1.13
DDX42-208ENST00000578681 KTN1Q86UP2 1357 aaKnown RBP22.11■■□□□ 1.13
DDX42-208ENST00000578681 PLEKHH2Q8IVE3 1493 aa22.1■■□□□ 1.13
DDX42-208ENST00000578681 STK26Q9P289 416 aa22.1■■□□□ 1.13
DDX42-208ENST00000578681 NEUROD2Q15784 382 aa22.09■■□□□ 1.13
DDX42-208ENST00000578681 TRAK1Q9UPV9 953 aa22.08■■□□□ 1.13
DDX42-208ENST00000578681 CDCA8Q53HL2 280 aa22.08■■□□□ 1.13
DDX42-208ENST00000578681 DNMT1P26358 1616 aaKnown RBP22.07■■□□□ 1.12
DDX42-208ENST00000578681 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
DDX42-208ENST00000578681 PZPP20742 1482 aa22.07■■□□□ 1.12
DDX42-208ENST00000578681 PPP4R2Q9NY27 417 aa22.07■■□□□ 1.12
DDX42-208ENST00000578681 RALBP1Q15311 655 aa22.06■■□□□ 1.12
DDX42-208ENST00000578681 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
DDX42-208ENST00000578681 NPM2Q86SE8 214 aaKnown RBP22.04■■□□□ 1.12
DDX42-208ENST00000578681 CANXP27824 592 aaKnown RBP22.03■■□□□ 1.12
DDX42-208ENST00000578681 CFAP70Q5T0N1 1121 aa22.03■■□□□ 1.12
DDX42-208ENST00000578681 NLRP13Q86W25 1043 aa22.03■■□□□ 1.12
DDX42-208ENST00000578681 SLC24A1O60721 1099 aa22.03■■□□□ 1.12
DDX42-208ENST00000578681 SYCP2Q9BX26 1530 aa22.03■■□□□ 1.12
DDX42-208ENST00000578681 MYBBP1AQ9BQG0 1328 aaKnown RBP22.01■■□□□ 1.11
DDX42-208ENST00000578681 ITSN2Q9NZM3 1697 aa22.01■■□□□ 1.11
DDX42-208ENST00000578681 ZBED9Q6R2W3 1325 aa22■■□□□ 1.11
DDX42-208ENST00000578681 ARID4BQ4LE39 1312 aaPredicted RBP21.98■■□□□ 1.11
DDX42-208ENST00000578681 TMEM132EQ6IEE7 984 aa21.98■■□□□ 1.11
DDX42-208ENST00000578681 NUDCQ9Y266 331 aa21.98■■□□□ 1.11
DDX42-208ENST00000578681 DENND4BO75064 1496 aaPredicted RBP21.97■■□□□ 1.11
DDX42-208ENST00000578681 RBM19Q9Y4C8 960 aaKnown RBP21.97■■□□□ 1.11
DDX42-208ENST00000578681 NBR1Q14596 966 aa21.96■■□□□ 1.11
DDX42-208ENST00000578681 CCDC146Q8IYE0 955 aa21.96■■□□□ 1.11
DDX42-208ENST00000578681 TRAPPC8Q9Y2L5 1435 aa21.95■■□□□ 1.1
DDX42-208ENST00000578681 POGKQ9P215 609 aa21.94■■□□□ 1.1
DDX42-208ENST00000578681 GCC2Q8IWJ2 1684 aa21.94■■□□□ 1.1
DDX42-208ENST00000578681 ERCC6L2Q5T890 1561 aa21.93■■□□□ 1.1
DDX42-208ENST00000578681 PPM1GO15355 546 aaPredicted RBP21.92■■□□□ 1.1
DDX42-208ENST00000578681 TEX14Q8IWB6 1497 aa21.92■■□□□ 1.1
DDX42-208ENST00000578681 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
DDX42-208ENST00000578681 ABCC10Q5T3U5 1492 aa21.92■■□□□ 1.1
DDX42-208ENST00000578681 ABCA8O94911 1581 aa21.91■■□□□ 1.1
DDX42-208ENST00000578681 PNISRQ8TF01 805 aaKnown RBP21.91■■□□□ 1.1
DDX42-208ENST00000578681 FAM69CQ0P6D2 419 aa21.89■■□□□ 1.1
DDX42-208ENST00000578681 PLCH2O75038 1416 aa21.89■■□□□ 1.1
DDX42-208ENST00000578681 RCAN3Q9UKA8 241 aa21.89■■□□□ 1.09
DDX42-208ENST00000578681 MORC1Q86VD1 984 aa21.88■■□□□ 1.09
DDX42-208ENST00000578681 PLIN1O60240 522 aa21.88■■□□□ 1.09
DDX42-208ENST00000578681 DEKP35659 375 aaKnown RBP21.86■■□□□ 1.09
DDX42-208ENST00000578681 CDCA7LQ96GN5 454 aa21.86■■□□□ 1.09
DDX42-208ENST00000578681 ADGRL2O95490 1459 aa21.86■■□□□ 1.09
DDX42-208ENST00000578681 FAM135AQ9P2D6 1515 aa21.86■■□□□ 1.09
DDX42-208ENST00000578681 MBD5Q9P267 1494 aa21.85■■□□□ 1.09
DDX42-208ENST00000578681 FANCAO15360 1455 aa21.84■■□□□ 1.09
DDX42-208ENST00000578681 ADGRL1O94910 1474 aa21.83■■□□□ 1.09
DDX42-208ENST00000578681 ABCC2Q92887 1545 aa21.83■■□□□ 1.09
DDX42-208ENST00000578681 DAXXQ9UER7 740 aaPredicted RBP21.82■■□□□ 1.08
DDX42-208ENST00000578681 CHD1O14646 1710 aa21.82■■□□□ 1.08
DDX42-208ENST00000578681 EIF3AQ14152 1382 aaKnown RBP21.81■■□□□ 1.08
DDX42-208ENST00000578681 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
DDX42-208ENST00000578681 ADAMTS8Q9UP79 889 aa21.8■■□□□ 1.08
DDX42-208ENST00000578681 ADGRF5Q8IZF2 1346 aa21.79■■□□□ 1.08
DDX42-208ENST00000578681 DISP3Q9P2K9 1392 aa21.79■■□□□ 1.08
DDX42-208ENST00000578681 ANP32AP39687 249 aaKnown RBP21.79■■□□□ 1.08
DDX42-208ENST00000578681 SHANK2Q9UPX8 1470 aa21.79■■□□□ 1.08
DDX42-208ENST00000578681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.78■■□□□ 1.085e-8■■■□□ 14.7
DDX42-208ENST00000578681 RRP7AQ9Y3A4 280 aaKnown RBP21.78■■□□□ 1.08
DDX42-208ENST00000578681 CD109Q6YHK3 1445 aa21.78■■□□□ 1.08
DDX42-208ENST00000578681 ERBINQ96RT1 1412 aa21.78■■□□□ 1.08
DDX42-208ENST00000578681 ASXL2Q76L83 1435 aa21.77■■□□□ 1.08
DDX42-208ENST00000578681 NEFMP07197 916 aa21.77■■□□□ 1.08
DDX42-208ENST00000578681 FRAT1Q92837 279 aaPredicted RBP21.76■■□□□ 1.07
DDX42-208ENST00000578681 PLEKHG5O94827 1062 aa21.76■■□□□ 1.07
DDX42-208ENST00000578681 EXOC6Q8TAG9 804 aa21.76■■□□□ 1.07
DDX42-208ENST00000578681 CFAP53Q96M91 514 aa21.75■■□□□ 1.07
DDX42-208ENST00000578681 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.75■■□□□ 1.07
DDX42-208ENST00000578681 MINK1Q8N4C8 1332 aaPredicted RBP21.75■■□□□ 1.07
DDX42-208ENST00000578681 SAMD9LQ8IVG5 1584 aa21.74■■□□□ 1.07
DDX42-208ENST00000578681 BRD4O60885 1362 aaPredicted RBP21.74■■□□□ 1.07
DDX42-208ENST00000578681 APAF1O14727 1248 aa21.74■■□□□ 1.07
DDX42-208ENST00000578681 SLC12A5Q9H2X9 1139 aa21.74■■□□□ 1.07
DDX42-208ENST00000578681 CENPJQ9HC77 1338 aaPredicted RBP21.74■■□□□ 1.07
DDX42-208ENST00000578681 SPATA31E1Q6ZUB1 1445 aa21.73■■□□□ 1.07
DDX42-208ENST00000578681 TTC37Q6PGP7 1564 aa21.73■■□□□ 1.07
DDX42-208ENST00000578681 GLIPR1L2Q4G1C9 344 aa21.73■■□□□ 1.07
DDX42-208ENST00000578681 PRAG1Q86YV5 1406 aa21.73■■□□□ 1.07
DDX42-208ENST00000578681 RALGAPBQ86X10 1494 aa21.73■■□□□ 1.07
DDX42-208ENST00000578681 CDC42BPAQ5VT25 1732 aa21.73■■□□□ 1.07
DDX42-208ENST00000578681 KDM5BQ9UGL1 1544 aa21.72■■□□□ 1.07
DDX42-208ENST00000578681 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
DDX42-208ENST00000578681 PPP2R1AP30153 589 aa21.71■■□□□ 1.07
DDX42-208ENST00000578681 TESK2Q96S53 571 aa21.71■■□□□ 1.07
DDX42-208ENST00000578681 CABP2Q9NPB3 220 aa21.71■■□□□ 1.07
DDX42-208ENST00000578681 U2AF1L5P0DN76 240 aaPredicted RBP21.7■■□□□ 1.06
DDX42-208ENST00000578681 U2AF1Q01081 240 aaKnown RBP eCLIP21.7■■□□□ 1.063e-10■■■□□ 15.2
DDX42-208ENST00000578681 DHX29Q7Z478 1369 aaKnown RBP21.7■■□□□ 1.06
DDX42-208ENST00000578681 WDR7Q9Y4E6 1490 aa21.7■■□□□ 1.06
DDX42-208ENST00000578681 NUTM2FA1L443 756 aa21.7■■□□□ 1.06
DDX42-208ENST00000578681 SOX12O15370 315 aa21.69■■□□□ 1.06
DDX42-208ENST00000578681 ERICH6BQ5W0A0 696 aa21.69■■□□□ 1.06
DDX42-208ENST00000578681 DUOX2Q9NRD8 1548 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms