RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 MLECQ14165 292 aa13.09□□□□□ -0.31
PPP4R1-210ENST00000578557 PTPRMP28827 1452 aa13.09□□□□□ -0.31
PPP4R1-210ENST00000578557 TCOF1Q13428 1488 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-210ENST00000578557 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-210ENST00000578557 ATP7AQ04656 1500 aa13.08□□□□□ -0.31
PPP4R1-210ENST00000578557 ANKRD30AQ9BXX3 1397 aa13.08□□□□□ -0.31
PPP4R1-210ENST00000578557 KIF3BO15066 747 aa13.07□□□□□ -0.32
PPP4R1-210ENST00000578557 GGT6Q6P531 493 aa13.07□□□□□ -0.32
PPP4R1-210ENST00000578557 SHANK2Q9UPX8 1470 aa13.06□□□□□ -0.32
PPP4R1-210ENST00000578557 FAM50AQ14320 339 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-210ENST00000578557 DIP2CQ9Y2E4 1556 aa13.06□□□□□ -0.32
PPP4R1-210ENST00000578557 FAM135AQ9P2D6 1515 aa13.05□□□□□ -0.32
PPP4R1-210ENST00000578557 WASHC2CQ9Y4E1 1318 aa13.05□□□□□ -0.32
PPP4R1-210ENST00000578557 ADAMTSL3P82987 1691 aa13.04□□□□□ -0.32
PPP4R1-210ENST00000578557 ABCC5O15440 1437 aa13.04□□□□□ -0.32
PPP4R1-210ENST00000578557 BCORL1Q5H9F3 1711 aa13.03□□□□□ -0.32
PPP4R1-210ENST00000578557 ZMYM3Q14202 1370 aa13.03□□□□□ -0.32
PPP4R1-210ENST00000578557 DAPK1P53355 1430 aa13.03□□□□□ -0.32
PPP4R1-210ENST00000578557 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
PPP4R1-210ENST00000578557 ROCK1Q13464 1354 aa13.02□□□□□ -0.33
PPP4R1-210ENST00000578557 NPATQ14207 1427 aa13.02□□□□□ -0.33
PPP4R1-210ENST00000578557 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-210ENST00000578557 RRP7BPQ9NSQ0 103 aa13.01□□□□□ -0.33
PPP4R1-210ENST00000578557 KIF15Q9NS87 1388 aa13.01□□□□□ -0.33
PPP4R1-210ENST00000578557 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
PPP4R1-210ENST00000578557 ERBINQ96RT1 1412 aa13.01□□□□□ -0.33
PPP4R1-210ENST00000578557 KIDINS220Q9ULH0 1771 aa13.01□□□□□ -0.33
PPP4R1-210ENST00000578557 KANK1Q14678 1352 aa13□□□□□ -0.33
PPP4R1-210ENST00000578557 DUOX2Q9NRD8 1548 aa12.99□□□□□ -0.33
PPP4R1-210ENST00000578557 ABCA6Q8N139 1617 aa12.99□□□□□ -0.33
PPP4R1-210ENST00000578557 PTPN23Q9H3S7 1636 aa12.99□□□□□ -0.33
PPP4R1-210ENST00000578557 PLXNC1O60486 1568 aa12.98□□□□□ -0.33
PPP4R1-210ENST00000578557 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
PPP4R1-210ENST00000578557 ADGBQ8N7X0 1667 aa12.96□□□□□ -0.33
PPP4R1-210ENST00000578557 CHIC2Q9UKJ5 165 aa12.96□□□□□ -0.33
PPP4R1-210ENST00000578557 UHRF1BP1Q6BDS2 1440 aa12.96□□□□□ -0.34
PPP4R1-210ENST00000578557 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.34
PPP4R1-210ENST00000578557 CEBPAP49715 358 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-210ENST00000578557 MADDQ8WXG6 1647 aa12.93□□□□□ -0.34
PPP4R1-210ENST00000578557 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-210ENST00000578557 ARHGAP31Q2M1Z3 1444 aa12.93□□□□□ -0.34
PPP4R1-210ENST00000578557 ANKRD50Q9ULJ7 1429 aa12.93□□□□□ -0.34
PPP4R1-210ENST00000578557 DNMT1P26358 1616 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-210ENST00000578557 THEMISQ8N1K5 641 aaPredicted RBP12.92□□□□□ -0.34
PPP4R1-210ENST00000578557 KDM5DQ9BY66 1539 aa12.92□□□□□ -0.34
PPP4R1-210ENST00000578557 PKD2Q13563 968 aa12.91□□□□□ -0.34
PPP4R1-210ENST00000578557 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
PPP4R1-210ENST00000578557 PTPRKQ15262 1439 aa12.89□□□□□ -0.35
PPP4R1-210ENST00000578557 EIF2AK4Q9P2K8 1649 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-210ENST00000578557 PZPP20742 1482 aa12.89□□□□□ -0.35
PPP4R1-210ENST00000578557 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-210ENST00000578557 PPARGC1BQ86YN6 1023 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-210ENST00000578557 TNRQ92752 1358 aa12.87□□□□□ -0.35
PPP4R1-210ENST00000578557 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
PPP4R1-210ENST00000578557 LMTK3Q96Q04 1460 aa12.86□□□□□ -0.35
PPP4R1-210ENST00000578557 NLRP1Q9C000 1473 aa12.86□□□□□ -0.35
PPP4R1-210ENST00000578557 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-210ENST00000578557 LMTK2Q8IWU2 1503 aa12.85□□□□□ -0.35
PPP4R1-210ENST00000578557 ITGAEP38570 1179 aa12.85□□□□□ -0.35
PPP4R1-210ENST00000578557 RIMS1Q86UR5 1692 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-210ENST00000578557 FER1L4A9Z1Z3 1794 aa12.84□□□□□ -0.35
PPP4R1-210ENST00000578557 HRCP23327 699 aa12.84□□□□□ -0.35
PPP4R1-210ENST00000578557 ANKLE2Q86XL3 938 aa12.84□□□□□ -0.35
PPP4R1-210ENST00000578557 RPRD2Q5VT52 1461 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-210ENST00000578557 FBXO31Q5XUX0 539 aaPredicted RBP12.83□□□□□ -0.36
PPP4R1-210ENST00000578557 RNF17Q9BXT8 1623 aaKnown RBP12.83□□□□□ -0.36
PPP4R1-210ENST00000578557 SIGLEC1Q9BZZ2 1709 aa12.82□□□□□ -0.36
PPP4R1-210ENST00000578557 PLA2R1Q13018 1463 aa12.82□□□□□ -0.36
PPP4R1-210ENST00000578557 ABCC3O15438 1527 aa12.82□□□□□ -0.36
PPP4R1-210ENST00000578557 NUP155O75694 1391 aa12.81□□□□□ -0.36
PPP4R1-210ENST00000578557 PTPRTO14522 1441 aa12.81□□□□□ -0.36
PPP4R1-210ENST00000578557 A2ML1A8K2U0 1454 aa12.81□□□□□ -0.36
PPP4R1-210ENST00000578557 HSPA2P54652 639 aa12.81□□□□□ -0.36
PPP4R1-210ENST00000578557 PRDM15P57071 1507 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-210ENST00000578557 HFM1A2PYH4 1435 aa12.8□□□□□ -0.36
PPP4R1-210ENST00000578557 STAG3Q9UJ98 1225 aa12.8□□□□□ -0.36
PPP4R1-210ENST00000578557 EID1Q9Y6B2 187 aa12.8□□□□□ -0.36
PPP4R1-210ENST00000578557 ZC3H13Q5T200 1668 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-210ENST00000578557 CROCC2H7BZ55 1655 aa12.79□□□□□ -0.36
PPP4R1-210ENST00000578557 MKRN4PQ13434 485 aaPredicted RBP12.77□□□□□ -0.37
PPP4R1-210ENST00000578557 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.37
PPP4R1-210ENST00000578557 NAIPQ13075 1403 aa12.77□□□□□ -0.37
PPP4R1-210ENST00000578557 ERVK-7P63135 1459 aa12.77□□□□□ -0.37
PPP4R1-210ENST00000578557 VWDEQ8N2E2 1590 aa12.77□□□□□ -0.37
PPP4R1-210ENST00000578557 IDI1Q13907 227 aa12.76□□□□□ -0.37
PPP4R1-210ENST00000578557 C3P01024 1663 aa12.76□□□□□ -0.37
PPP4R1-210ENST00000578557 PREX1Q8TCU6 1659 aa12.76□□□□□ -0.37
PPP4R1-210ENST00000578557 NOS1P29475 1434 aa12.75□□□□□ -0.37
PPP4R1-210ENST00000578557 SPATA31D1Q6ZQQ2 1576 aa12.75□□□□□ -0.37
PPP4R1-210ENST00000578557 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
PPP4R1-210ENST00000578557 TRIM52Q96A61 297 aa12.74□□□□□ -0.37
PPP4R1-210ENST00000578557 CLTCQ00610 1675 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-210ENST00000578557 UGGT1Q9NYU2 1555 aa12.73□□□□□ -0.37
PPP4R1-210ENST00000578557 MROH1Q8NDA8 1641 aa12.72□□□□□ -0.37
PPP4R1-210ENST00000578557 TXNDC2Q86VQ3 553 aa12.71□□□□□ -0.37
PPP4R1-210ENST00000578557 CEP170BQ9Y4F5 1589 aaPredicted RBP12.71□□□□□ -0.37
PPP4R1-210ENST00000578557 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.38
PPP4R1-210ENST00000578557 NCKAP5LQ9HCH0 1330 aa12.7□□□□□ -0.38
PPP4R1-210ENST00000578557 TMEM2Q9UHN6 1383 aa12.69□□□□□ -0.38
PPP4R1-210ENST00000578557 EFCAB6Q5THR3 1501 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms