RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 NPATQ14207 1427 aa21.15■□□□□ 0.98
CSNK1D-208ENST00000578501 UBAP1LF5GYI3 381 aa21.14■□□□□ 0.97
CSNK1D-208ENST00000578501 ABCC5O15440 1437 aa21.12■□□□□ 0.97
CSNK1D-208ENST00000578501 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
CSNK1D-208ENST00000578501 CAMSAP1Q5T5Y3 1602 aa21.11■□□□□ 0.97
CSNK1D-208ENST00000578501 PKD2Q13563 968 aa21.1■□□□□ 0.97
CSNK1D-208ENST00000578501 GGT6Q6P531 493 aa21.1■□□□□ 0.97
CSNK1D-208ENST00000578501 DAPK1P53355 1430 aa21.09■□□□□ 0.97
CSNK1D-208ENST00000578501 ZMYM3Q14202 1370 aa21.09■□□□□ 0.97
CSNK1D-208ENST00000578501 KIF3BO15066 747 aa21.08■□□□□ 0.97
CSNK1D-208ENST00000578501 DNMT1P26358 1616 aaKnown RBP21.07■□□□□ 0.96
CSNK1D-208ENST00000578501 ZNF335Q9H4Z2 1342 aaPredicted RBP21.07■□□□□ 0.96
CSNK1D-208ENST00000578501 NCKAP5LQ9HCH0 1330 aa21.07■□□□□ 0.96
CSNK1D-208ENST00000578501 MROH2AA6NES4 1674 aa21.07■□□□□ 0.96
CSNK1D-208ENST00000578501 CROCC2H7BZ55 1655 aa21.06■□□□□ 0.96
CSNK1D-208ENST00000578501 FAM135AQ9P2D6 1515 aa21.04■□□□□ 0.96
CSNK1D-208ENST00000578501 PLA2R1Q13018 1463 aa21.03■□□□□ 0.96
CSNK1D-208ENST00000578501 DUOX2Q9NRD8 1548 aa21.03■□□□□ 0.96
CSNK1D-208ENST00000578501 FAM50AQ14320 339 aaKnown RBP21.02■□□□□ 0.96
CSNK1D-208ENST00000578501 KIF15Q9NS87 1388 aa21.01■□□□□ 0.95
CSNK1D-208ENST00000578501 EIF2AK4Q9P2K8 1649 aaKnown RBP21.01■□□□□ 0.95
CSNK1D-208ENST00000578501 CLTCQ00610 1675 aaKnown RBP21.01■□□□□ 0.95
CSNK1D-208ENST00000578501 ANKRD30AQ9BXX3 1397 aa20.99■□□□□ 0.95
CSNK1D-208ENST00000578501 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
CSNK1D-208ENST00000578501 ERBINQ96RT1 1412 aa20.98■□□□□ 0.95
CSNK1D-208ENST00000578501 RNF17Q9BXT8 1623 aaKnown RBP20.98■□□□□ 0.95
CSNK1D-208ENST00000578501 KDM5DQ9BY66 1539 aa20.98■□□□□ 0.95
CSNK1D-208ENST00000578501 ADGRL2O95490 1459 aa20.97■□□□□ 0.95
CSNK1D-208ENST00000578501 WASHC2CQ9Y4E1 1318 aa20.97■□□□□ 0.95
CSNK1D-208ENST00000578501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.954e-6■■■■□ 23.1
CSNK1D-208ENST00000578501 PTPRKQ15262 1439 aa20.96■□□□□ 0.95
CSNK1D-208ENST00000578501 PPARGC1BQ86YN6 1023 aaKnown RBP20.96■□□□□ 0.95
CSNK1D-208ENST00000578501 TOM1O60784 492 aa20.95■□□□□ 0.94
CSNK1D-208ENST00000578501 CHIC2Q9UKJ5 165 aa20.95■□□□□ 0.94
CSNK1D-208ENST00000578501 ZNF142P52746 1687 aaPredicted RBP20.95■□□□□ 0.94
CSNK1D-208ENST00000578501 CEP170BQ9Y4F5 1589 aaPredicted RBP20.94■□□□□ 0.94
CSNK1D-208ENST00000578501 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
CSNK1D-208ENST00000578501 MYO3AQ8NEV4 1616 aa20.93■□□□□ 0.94
CSNK1D-208ENST00000578501 HSPA1LP34931 641 aa20.92■□□□□ 0.94
CSNK1D-208ENST00000578501 PZPP20742 1482 aa20.91■□□□□ 0.94
CSNK1D-208ENST00000578501 MROH1Q8NDA8 1641 aa20.91■□□□□ 0.94
CSNK1D-208ENST00000578501 ZC3H13Q5T200 1668 aaKnown RBP20.89■□□□□ 0.94
CSNK1D-208ENST00000578501 ABCC3O15438 1527 aa20.89■□□□□ 0.94
CSNK1D-208ENST00000578501 PIP4K2BP78356 416 aa20.89■□□□□ 0.93
CSNK1D-208ENST00000578501 ROCK1Q13464 1354 aa20.88■□□□□ 0.93
CSNK1D-208ENST00000578501 PRDM15P57071 1507 aaPredicted RBP20.88■□□□□ 0.93
CSNK1D-208ENST00000578501 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-208ENST00000578501 MED1Q15648 1581 aaPredicted RBP20.87■□□□□ 0.93
CSNK1D-208ENST00000578501 CPS1P31327 1500 aa20.87■□□□□ 0.93
CSNK1D-208ENST00000578501 A2ML1A8K2U0 1454 aa20.87■□□□□ 0.93
CSNK1D-208ENST00000578501 DEPDC5O75140 1603 aa20.86■□□□□ 0.93
CSNK1D-208ENST00000578501 FBXO31Q5XUX0 539 aaPredicted RBP20.84■□□□□ 0.93
CSNK1D-208ENST00000578501 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
CSNK1D-208ENST00000578501 ANKRD50Q9ULJ7 1429 aa20.84■□□□□ 0.93
CSNK1D-208ENST00000578501 KANK1Q14678 1352 aa20.83■□□□□ 0.92
CSNK1D-208ENST00000578501 TNRQ92752 1358 aa20.83■□□□□ 0.92
CSNK1D-208ENST00000578501 ARHGAP31Q2M1Z3 1444 aa20.81■□□□□ 0.92
CSNK1D-208ENST00000578501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.8■□□□□ 0.92
CSNK1D-208ENST00000578501 VWDEQ8N2E2 1590 aa20.8■□□□□ 0.92
CSNK1D-208ENST00000578501 ANKLE2Q86XL3 938 aa20.79■□□□□ 0.92
CSNK1D-208ENST00000578501 LMTK2Q8IWU2 1503 aa20.78■□□□□ 0.92
CSNK1D-208ENST00000578501 CEP152O94986 1710 aa20.78■□□□□ 0.92
CSNK1D-208ENST00000578501 NLRP1Q9C000 1473 aa20.77■□□□□ 0.92
CSNK1D-208ENST00000578501 ITGAEP38570 1179 aa20.77■□□□□ 0.92
CSNK1D-208ENST00000578501 ERVK-7P63135 1459 aa20.76■□□□□ 0.91
CSNK1D-208ENST00000578501 THEMISQ8N1K5 641 aaPredicted RBP20.76■□□□□ 0.91
CSNK1D-208ENST00000578501 POLR1AO95602 1720 aaPredicted RBP20.73■□□□□ 0.91
CSNK1D-208ENST00000578501 NEURL4Q96JN8 1562 aa20.72■□□□□ 0.91
CSNK1D-208ENST00000578501 UNC13BO14795 1591 aa20.7■□□□□ 0.9
CSNK1D-208ENST00000578501 EFCAB6Q5THR3 1501 aa20.68■□□□□ 0.9
CSNK1D-208ENST00000578501 NPHP4O75161 1426 aaPredicted RBP20.68■□□□□ 0.9
CSNK1D-208ENST00000578501 MED14O60244 1454 aa20.68■□□□□ 0.9
CSNK1D-208ENST00000578501 UGGT1Q9NYU2 1555 aa20.68■□□□□ 0.9
CSNK1D-208ENST00000578501 RPRD2Q5VT52 1461 aaKnown RBP20.67■□□□□ 0.9
CSNK1D-208ENST00000578501 NOS1P29475 1434 aa20.64■□□□□ 0.89
CSNK1D-208ENST00000578501 TET3O43151 1660 aa20.64■□□□□ 0.89
CSNK1D-208ENST00000578501 NAIPQ13075 1403 aa20.63■□□□□ 0.89
CSNK1D-208ENST00000578501 CFAP65Q6ZU64 1925 aaKnown RBP20.63■□□□□ 0.89
CSNK1D-208ENST00000578501 NUP155O75694 1391 aa20.62■□□□□ 0.89
CSNK1D-208ENST00000578501 IQGAP3Q86VI3 1631 aa20.61■□□□□ 0.89
CSNK1D-208ENST00000578501 ALKQ9UM73 1620 aa20.61■□□□□ 0.89
CSNK1D-208ENST00000578501 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
CSNK1D-208ENST00000578501 SLC52A1Q9NWF4 448 aa20.6■□□□□ 0.89
CSNK1D-208ENST00000578501 GCC2Q8IWJ2 1684 aa20.59■□□□□ 0.89
CSNK1D-208ENST00000578501 IDI1Q13907 227 aa20.58■□□□□ 0.89
CSNK1D-208ENST00000578501 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.89
CSNK1D-208ENST00000578501 SYNMO15061 1565 aa20.58■□□□□ 0.88
CSNK1D-208ENST00000578501 UBR1Q8IWV7 1749 aa20.58■□□□□ 0.88
CSNK1D-208ENST00000578501 LRRC7Q96NW7 1537 aa20.58■□□□□ 0.88
CSNK1D-208ENST00000578501 IQGAP1P46940 1657 aa20.57■□□□□ 0.88
CSNK1D-208ENST00000578501 KDM5AP29375 1690 aaKnown RBP20.56■□□□□ 0.88
CSNK1D-208ENST00000578501 SLIT1O75093 1534 aa20.54■□□□□ 0.88
CSNK1D-208ENST00000578501 PIK3C2BO00750 1634 aa20.54■□□□□ 0.88
CSNK1D-208ENST00000578501 ARHGAP23Q9P227 1491 aa20.54■□□□□ 0.88
CSNK1D-208ENST00000578501 E9PCH4 1651 aa20.53■□□□□ 0.88
CSNK1D-208ENST00000578501 STAG3Q9UJ98 1225 aa20.52■□□□□ 0.88
CSNK1D-208ENST00000578501 TMEM2Q9UHN6 1383 aa20.51■□□□□ 0.87
CSNK1D-208ENST00000578501 RGS17Q9UGC6 210 aaPredicted RBP20.51■□□□□ 0.87
CSNK1D-208ENST00000578501 SCAF11Q99590 1463 aaKnown RBP20.5■□□□□ 0.87
CSNK1D-208ENST00000578501 ADGRB3O60242 1522 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms