RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PREX2Q70Z35 1606 aa12.08□□□□□ -0.48
COPS3-215ENST00000578317 ITSN2Q9NZM3 1697 aa12.08□□□□□ -0.48
COPS3-215ENST00000578317 AKNAQ7Z591 1439 aa12.07□□□□□ -0.48
COPS3-215ENST00000578317 PTPN23Q9H3S7 1636 aa12.07□□□□□ -0.48
COPS3-215ENST00000578317 CDC42BPAQ5VT25 1732 aa12.07□□□□□ -0.48
COPS3-215ENST00000578317 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
COPS3-215ENST00000578317 CAMSAP2Q08AD1 1489 aa12.07□□□□□ -0.48
COPS3-215ENST00000578317 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
COPS3-215ENST00000578317 ABCC5O15440 1437 aa12.06□□□□□ -0.48
COPS3-215ENST00000578317 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
COPS3-215ENST00000578317 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
COPS3-215ENST00000578317 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
COPS3-215ENST00000578317 CDC42BPBQ9Y5S2 1711 aa12.05□□□□□ -0.48
COPS3-215ENST00000578317 SCAPERQ9BY12 1400 aa12.05□□□□□ -0.48
COPS3-215ENST00000578317 MYO5CQ9NQX4 1742 aa12.05□□□□□ -0.48
COPS3-215ENST00000578317 CFAP44Q96MT7 982 aa12.04□□□□□ -0.48
COPS3-215ENST00000578317 DAPK1P53355 1430 aa12.03□□□□□ -0.48
COPS3-215ENST00000578317 PTPRKQ15262 1439 aa12.03□□□□□ -0.48
COPS3-215ENST00000578317 ARHGEF12Q9NZN5 1544 aa12.03□□□□□ -0.48
COPS3-215ENST00000578317 SAMD9LQ8IVG5 1584 aa12.03□□□□□ -0.48
COPS3-215ENST00000578317 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
COPS3-215ENST00000578317 ITGAEP38570 1179 aa12.03□□□□□ -0.48
COPS3-215ENST00000578317 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
COPS3-215ENST00000578317 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
COPS3-215ENST00000578317 ADGRL1O94910 1474 aa12.03□□□□□ -0.48
COPS3-215ENST00000578317 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
COPS3-215ENST00000578317 AFAP1Q8N556 730 aa12.02□□□□□ -0.49
COPS3-215ENST00000578317 ROCK1Q13464 1354 aa12.02□□□□□ -0.49
COPS3-215ENST00000578317 TRAPPC8Q9Y2L5 1435 aa12.01□□□□□ -0.49
COPS3-215ENST00000578317 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
COPS3-215ENST00000578317 ABCC1P33527 1531 aa12.01□□□□□ -0.49
COPS3-215ENST00000578317 ARHGEF5Q12774 1597 aa12.01□□□□□ -0.49
COPS3-215ENST00000578317 HRCP23327 699 aa12□□□□□ -0.49
COPS3-215ENST00000578317 CFAP74Q9C0B2 1584 aa12□□□□□ -0.49
COPS3-215ENST00000578317 DENND4BO75064 1496 aaPredicted RBP12□□□□□ -0.49
COPS3-215ENST00000578317 RTEL1-TNFRSF6BF6WH68 1400 aa12□□□□□ -0.49
COPS3-215ENST00000578317 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
COPS3-215ENST00000578317 SHANK2Q9UPX8 1470 aa11.99□□□□□ -0.49
COPS3-215ENST00000578317 NCOA1Q15788 1441 aa11.99□□□□□ -0.49
COPS3-215ENST00000578317 SPAG9O60271 1321 aaKnown RBP11.99□□□□□ -0.49
COPS3-215ENST00000578317 CHIC2Q9UKJ5 165 aa11.99□□□□□ -0.49
COPS3-215ENST00000578317 SYCP2Q9BX26 1530 aa11.98□□□□□ -0.49
COPS3-215ENST00000578317 ZNF518AQ6AHZ1 1483 aa11.98□□□□□ -0.49
COPS3-215ENST00000578317 RAPGEF3O95398 923 aa11.98□□□□□ -0.49
COPS3-215ENST00000578317 SPRYD3Q8NCJ5 442 aa11.98□□□□□ -0.49
COPS3-215ENST00000578317 KDM2AQ9Y2K7 1162 aa11.98□□□□□ -0.49
COPS3-215ENST00000578317 DNMT1P26358 1616 aaKnown RBP11.98□□□□□ -0.49
COPS3-215ENST00000578317 COL17A1Q9UMD9 1497 aaPredicted RBP11.98□□□□□ -0.49
COPS3-215ENST00000578317 C9orf84Q5VXU9 1444 aa11.98□□□□□ -0.49
COPS3-215ENST00000578317 POGZQ7Z3K3 1410 aa11.98□□□□□ -0.49
COPS3-215ENST00000578317 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
COPS3-215ENST00000578317 ADGRL2O95490 1459 aa11.97□□□□□ -0.49
COPS3-215ENST00000578317 ACIN1Q9UKV3 1341 aaKnown RBP11.97□□□□□ -0.49
COPS3-215ENST00000578317 HFM1A2PYH4 1435 aa11.96□□□□□ -0.49
COPS3-215ENST00000578317 GSE1Q14687 1217 aa11.96□□□□□ -0.5
COPS3-215ENST00000578317 MLH3Q9UHC1 1453 aa11.96□□□□□ -0.5
COPS3-215ENST00000578317 NAIPQ13075 1403 aa11.95□□□□□ -0.5
COPS3-215ENST00000578317 DCAF8Q5TAQ9 597 aa11.94□□□□□ -0.5
COPS3-215ENST00000578317 RRP7BPQ9NSQ0 103 aa11.94□□□□□ -0.5
COPS3-215ENST00000578317 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
COPS3-215ENST00000578317 MAST1Q9Y2H9 1570 aa11.93□□□□□ -0.5
COPS3-215ENST00000578317 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
COPS3-215ENST00000578317 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
COPS3-215ENST00000578317 KDM6BO15054 1643 aa11.93□□□□□ -0.5
COPS3-215ENST00000578317 MAGI2Q86UL8 1455 aa11.93□□□□□ -0.5
COPS3-215ENST00000578317 TAOK2Q9UL54 1235 aa11.93□□□□□ -0.5
COPS3-215ENST00000578317 KDM5CP41229 1560 aa11.92□□□□□ -0.5
COPS3-215ENST00000578317 KIF15Q9NS87 1388 aa11.92□□□□□ -0.5
COPS3-215ENST00000578317 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
COPS3-215ENST00000578317 DHX29Q7Z478 1369 aaKnown RBP11.9□□□□□ -0.51
COPS3-215ENST00000578317 RAB3GAP2Q9H2M9 1393 aa11.9□□□□□ -0.51
COPS3-215ENST00000578317 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
COPS3-215ENST00000578317 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
COPS3-215ENST00000578317 ANKRD50Q9ULJ7 1429 aa11.89□□□□□ -0.51
COPS3-215ENST00000578317 RICTORQ6R327 1708 aa11.89□□□□□ -0.51
COPS3-215ENST00000578317 ZMYM4Q5VZL5 1548 aa11.89□□□□□ -0.51
COPS3-215ENST00000578317 ZFYVE16Q7Z3T8 1539 aa11.88□□□□□ -0.51
COPS3-215ENST00000578317 ATP7AQ04656 1500 aa11.87□□□□□ -0.51
COPS3-215ENST00000578317 TSHZ2Q9NRE2 1034 aa11.86□□□□□ -0.51
COPS3-215ENST00000578317 CROCC2H7BZ55 1655 aa11.86□□□□□ -0.51
COPS3-215ENST00000578317 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
COPS3-215ENST00000578317 PLXNC1O60486 1568 aa11.86□□□□□ -0.51
COPS3-215ENST00000578317 INO80Q9ULG1 1556 aaPredicted RBP11.86□□□□□ -0.51
COPS3-215ENST00000578317 ERBINQ96RT1 1412 aa11.86□□□□□ -0.51
COPS3-215ENST00000578317 PRKCSHP14314 528 aaPredicted RBP11.86□□□□□ -0.51
COPS3-215ENST00000578317 YEATS2Q9ULM3 1422 aa11.84□□□□□ -0.51
COPS3-215ENST00000578317 ATP10AO60312 1499 aa11.84□□□□□ -0.51
COPS3-215ENST00000578317 A2MP01023 1474 aa11.84□□□□□ -0.51
COPS3-215ENST00000578317 HS6ST3Q8IZP7 471 aa11.84□□□□□ -0.51
COPS3-215ENST00000578317 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
COPS3-215ENST00000578317 HECW2Q9P2P5 1572 aa11.84□□□□□ -0.51
COPS3-215ENST00000578317 KIDINS220Q9ULH0 1771 aa11.84□□□□□ -0.51
COPS3-215ENST00000578317 ADGBQ8N7X0 1667 aa11.82□□□□□ -0.52
COPS3-215ENST00000578317 KIF3BO15066 747 aa11.82□□□□□ -0.52
COPS3-215ENST00000578317 PYGBP11216 843 aa11.82□□□□□ -0.52
COPS3-215ENST00000578317 CHRM1P11229 460 aaPredicted RBP11.82□□□□□ -0.52
COPS3-215ENST00000578317 TRIM52Q96A61 297 aa11.8□□□□□ -0.52
COPS3-215ENST00000578317 REREQ9P2R6 1566 aa11.8□□□□□ -0.52
COPS3-215ENST00000578317 ARHGEF40Q8TER5 1519 aa11.79□□□□□ -0.52
COPS3-215ENST00000578317 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms