RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 MLH3Q9UHC1 1453 aa16.93■□□□□ 0.3
TRAPPC8-204ENST00000578252 ATP7AQ04656 1500 aa16.92■□□□□ 0.3
TRAPPC8-204ENST00000578252 ZFYVE16Q7Z3T8 1539 aa16.92■□□□□ 0.3
TRAPPC8-204ENST00000578252 AFAP1Q8N556 730 aa16.92■□□□□ 0.3
TRAPPC8-204ENST00000578252 PLXNC1O60486 1568 aa16.92■□□□□ 0.3
TRAPPC8-204ENST00000578252 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
TRAPPC8-204ENST00000578252 COL17A1Q9UMD9 1497 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC8-204ENST00000578252 ADGRL2O95490 1459 aa16.91■□□□□ 0.3
TRAPPC8-204ENST00000578252 RAPGEF3O95398 923 aa16.9■□□□□ 0.3
TRAPPC8-204ENST00000578252 ROCK1Q13464 1354 aa16.89■□□□□ 0.3
TRAPPC8-204ENST00000578252 KIDINS220Q9ULH0 1771 aa16.89■□□□□ 0.3
TRAPPC8-204ENST00000578252 POTEHQ6S545 545 aa16.89■□□□□ 0.29
TRAPPC8-204ENST00000578252 ITGAEP38570 1179 aa16.88■□□□□ 0.29
TRAPPC8-204ENST00000578252 ANKRD30AQ9BXX3 1397 aa16.88■□□□□ 0.29
TRAPPC8-204ENST00000578252 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
TRAPPC8-204ENST00000578252 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
TRAPPC8-204ENST00000578252 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
TRAPPC8-204ENST00000578252 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
TRAPPC8-204ENST00000578252 NCOA1Q15788 1441 aa16.85■□□□□ 0.29
TRAPPC8-204ENST00000578252 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
TRAPPC8-204ENST00000578252 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
TRAPPC8-204ENST00000578252 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
TRAPPC8-204ENST00000578252 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
TRAPPC8-204ENST00000578252 DIP2CQ9Y2E4 1556 aa16.84■□□□□ 0.29
TRAPPC8-204ENST00000578252 DUOX2Q9NRD8 1548 aa16.83■□□□□ 0.28
TRAPPC8-204ENST00000578252 CHIC2Q9UKJ5 165 aa16.83■□□□□ 0.28
TRAPPC8-204ENST00000578252 REREQ9P2R6 1566 aa16.82■□□□□ 0.28
TRAPPC8-204ENST00000578252 HFM1A2PYH4 1435 aa16.82■□□□□ 0.28
TRAPPC8-204ENST00000578252 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
TRAPPC8-204ENST00000578252 REM2Q8IYK8 340 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC8-204ENST00000578252 ATP10AO60312 1499 aa16.8■□□□□ 0.28
TRAPPC8-204ENST00000578252 YEATS2Q9ULM3 1422 aa16.79■□□□□ 0.28
TRAPPC8-204ENST00000578252 EIF2AK4Q9P2K8 1649 aaKnown RBP16.79■□□□□ 0.28
TRAPPC8-204ENST00000578252 A2MP01023 1474 aa16.79■□□□□ 0.28
TRAPPC8-204ENST00000578252 NAIPQ13075 1403 aa16.79■□□□□ 0.28
TRAPPC8-204ENST00000578252 ERBINQ96RT1 1412 aa16.79■□□□□ 0.28
TRAPPC8-204ENST00000578252 CHRDL2Q6WN34 429 aa16.77■□□□□ 0.28
TRAPPC8-204ENST00000578252 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
TRAPPC8-204ENST00000578252 DHX29Q7Z478 1369 aaKnown RBP16.77■□□□□ 0.27
TRAPPC8-204ENST00000578252 BCORL1Q5H9F3 1711 aa16.76■□□□□ 0.27
TRAPPC8-204ENST00000578252 PCGF6Q9BYE7 350 aa16.75■□□□□ 0.27
TRAPPC8-204ENST00000578252 SETD5Q9C0A6 1442 aa16.75■□□□□ 0.27
TRAPPC8-204ENST00000578252 ANKRD50Q9ULJ7 1429 aa16.75■□□□□ 0.27
TRAPPC8-204ENST00000578252 ACIN1Q9UKV3 1341 aaKnown RBP16.74■□□□□ 0.27
TRAPPC8-204ENST00000578252 AGLP35573 1532 aa16.74■□□□□ 0.27
TRAPPC8-204ENST00000578252 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC8-204ENST00000578252 RNF17Q9BXT8 1623 aaKnown RBP16.7■□□□□ 0.26
TRAPPC8-204ENST00000578252 DEPDC5O75140 1603 aa16.7■□□□□ 0.26
TRAPPC8-204ENST00000578252 HRCP23327 699 aa16.69■□□□□ 0.26
TRAPPC8-204ENST00000578252 UNC13BO14795 1591 aa16.68■□□□□ 0.26
TRAPPC8-204ENST00000578252 RAB3GAP2Q9H2M9 1393 aa16.67■□□□□ 0.26
TRAPPC8-204ENST00000578252 SIGLEC1Q9BZZ2 1709 aa16.67■□□□□ 0.26
TRAPPC8-204ENST00000578252 PRDM15P57071 1507 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC8-204ENST00000578252 FAM135AQ9P2D6 1515 aa16.65■□□□□ 0.26
TRAPPC8-204ENST00000578252 SSUH2Q9Y2M2 353 aa16.65■□□□□ 0.26
TRAPPC8-204ENST00000578252 KIF3BO15066 747 aa16.64■□□□□ 0.25
TRAPPC8-204ENST00000578252 KDM5DQ9BY66 1539 aa16.63■□□□□ 0.25
TRAPPC8-204ENST00000578252 MROH1Q8NDA8 1641 aa16.63■□□□□ 0.25
TRAPPC8-204ENST00000578252 ZC3H13Q5T200 1668 aaKnown RBP16.62■□□□□ 0.25
TRAPPC8-204ENST00000578252 PITPNM1O00562 1244 aa16.62■□□□□ 0.25
TRAPPC8-204ENST00000578252 ARID4BQ4LE39 1312 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC8-204ENST00000578252 IQGAP3Q86VI3 1631 aa16.62■□□□□ 0.25
TRAPPC8-204ENST00000578252 KANK1Q14678 1352 aa16.62■□□□□ 0.25
TRAPPC8-204ENST00000578252 VWDEQ8N2E2 1590 aa16.6■□□□□ 0.25
TRAPPC8-204ENST00000578252 NUP155O75694 1391 aa16.58■□□□□ 0.24
TRAPPC8-204ENST00000578252 LMTK2Q8IWU2 1503 aa16.57■□□□□ 0.24
TRAPPC8-204ENST00000578252 GGT6Q6P531 493 aa16.57■□□□□ 0.24
TRAPPC8-204ENST00000578252 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
TRAPPC8-204ENST00000578252 FER1L4A9Z1Z3 1794 aa16.56■□□□□ 0.24
TRAPPC8-204ENST00000578252 CEP152O94986 1710 aa16.56■□□□□ 0.24
TRAPPC8-204ENST00000578252 TET3O43151 1660 aa16.56■□□□□ 0.24
TRAPPC8-204ENST00000578252 ABCC3O15438 1527 aa16.55■□□□□ 0.24
TRAPPC8-204ENST00000578252 MROH2AA6NES4 1674 aa16.55■□□□□ 0.24
TRAPPC8-204ENST00000578252 CNTLNQ9NXG0 1405 aa16.54■□□□□ 0.24
TRAPPC8-204ENST00000578252 PZPP20742 1482 aa16.54■□□□□ 0.24
TRAPPC8-204ENST00000578252 ADAMTSL3P82987 1691 aa16.53■□□□□ 0.24
TRAPPC8-204ENST00000578252 CLTCQ00610 1675 aaKnown RBP16.53■□□□□ 0.24
TRAPPC8-204ENST00000578252 CAMSAP1Q5T5Y3 1602 aa16.53■□□□□ 0.24
TRAPPC8-204ENST00000578252 WASHC2CQ9Y4E1 1318 aa16.53■□□□□ 0.24
TRAPPC8-204ENST00000578252 MLECQ14165 292 aa16.53■□□□□ 0.24
TRAPPC8-204ENST00000578252 EFCAB6Q5THR3 1501 aa16.52■□□□□ 0.24
TRAPPC8-204ENST00000578252 ESF1Q9H501 851 aaKnown RBP16.52■□□□□ 0.24
TRAPPC8-204ENST00000578252 MADDQ8WXG6 1647 aa16.49■□□□□ 0.23
TRAPPC8-204ENST00000578252 ARHGAP31Q2M1Z3 1444 aa16.49■□□□□ 0.23
TRAPPC8-204ENST00000578252 RPRD2Q5VT52 1461 aaKnown RBP16.48■□□□□ 0.23
TRAPPC8-204ENST00000578252 MPHOSPH9Q99550 1183 aa16.48■□□□□ 0.23
TRAPPC8-204ENST00000578252 E9PCH4 1651 aa16.48■□□□□ 0.23
TRAPPC8-204ENST00000578252 RIMS1Q86UR5 1692 aaKnown RBP16.47■□□□□ 0.23
TRAPPC8-204ENST00000578252 SPDYE1Q8NFV5 336 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC8-204ENST00000578252 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
TRAPPC8-204ENST00000578252 DHX57Q6P158 1386 aaKnown RBP16.45■□□□□ 0.22
TRAPPC8-204ENST00000578252 PKD2Q13563 968 aa16.44■□□□□ 0.22
TRAPPC8-204ENST00000578252 PIP4P2Q8N4L2 257 aa16.44■□□□□ 0.22
TRAPPC8-204ENST00000578252 NPATQ14207 1427 aa16.44■□□□□ 0.22
TRAPPC8-204ENST00000578252 C3P01024 1663 aa16.43■□□□□ 0.22
TRAPPC8-204ENST00000578252 SPHKAPQ2M3C7 1700 aa16.43■□□□□ 0.22
TRAPPC8-204ENST00000578252 ZMYM3Q14202 1370 aa16.42■□□□□ 0.22
TRAPPC8-204ENST00000578252 PREX1Q8TCU6 1659 aa16.42■□□□□ 0.22
TRAPPC8-204ENST00000578252 SPATA31D1Q6ZQQ2 1576 aa16.39■□□□□ 0.21
TRAPPC8-204ENST00000578252 FXR2P51116 673 aaKnown RBP eCLIP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms