RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-208ENST00000578218 TCOF1Q13428 1488 aaKnown RBP39.64■■■■□ 3.94
THRA-208ENST00000578218 DNMT1P26358 1616 aaKnown RBP39.62■■■■□ 3.93
THRA-208ENST00000578218 PZPP20742 1482 aa39.61■■■■□ 3.93
THRA-208ENST00000578218 PKD2Q13563 968 aa39.6■■■■□ 3.93
THRA-208ENST00000578218 LOC105371045A0A1W2PR82 267 aa39.59■■■■□ 3.93
THRA-208ENST00000578218 POLR1AO95602 1720 aaPredicted RBP39.58■■■■□ 3.93
THRA-208ENST00000578218 MAST1Q9Y2H9 1570 aa39.58■■■■□ 3.93
THRA-208ENST00000578218 TSPY4P0CV99 314 aa39.57■■■■□ 3.93
THRA-208ENST00000578218 TSPY10P0CW01 314 aa39.57■■■■□ 3.93
THRA-208ENST00000578218 MAP3K1Q13233 1512 aa39.56■■■■□ 3.92
THRA-208ENST00000578218 TNRQ92752 1358 aa39.56■■■■□ 3.92
THRA-208ENST00000578218 RNF17Q9BXT8 1623 aaKnown RBP39.54■■■■□ 3.92
THRA-208ENST00000578218 ZNF335Q9H4Z2 1342 aaPredicted RBP39.52■■■■□ 3.92
THRA-208ENST00000578218 WASHC2CQ9Y4E1 1318 aa39.52■■■■□ 3.92
THRA-208ENST00000578218 ZC3H13Q5T200 1668 aaKnown RBP39.51■■■■□ 3.91
THRA-208ENST00000578218 EIF2AK4Q9P2K8 1649 aaKnown RBP39.5■■■■□ 3.91
THRA-208ENST00000578218 MYOM3Q5VTT5 1437 aa39.48■■■■□ 3.91
THRA-208ENST00000578218 FBXO31Q5XUX0 539 aaPredicted RBP39.46■■■■□ 3.91
THRA-208ENST00000578218 MIA2Q96PC5 1412 aa39.45■■■■□ 3.91
THRA-208ENST00000578218 KANK4Q5T7N3 995 aaPredicted RBP39.44■■■■□ 3.9
THRA-208ENST00000578218 NEURL4Q96JN8 1562 aa39.42■■■■□ 3.9
THRA-208ENST00000578218 ABCC3O15438 1527 aa39.4■■■■□ 3.9
THRA-208ENST00000578218 NLRP1Q9C000 1473 aa39.4■■■■□ 3.9
THRA-208ENST00000578218 CROCC2H7BZ55 1655 aa39.38■■■■□ 3.9
THRA-208ENST00000578218 SPATA31D1Q6ZQQ2 1576 aa39.38■■■■□ 3.89
THRA-208ENST00000578218 DISP3Q9P2K9 1392 aa39.37■■■■□ 3.89
THRA-208ENST00000578218 UGGT1Q9NYU2 1555 aa39.37■■■■□ 3.89
THRA-208ENST00000578218 CEP152O94986 1710 aa39.37■■■■□ 3.89
THRA-208ENST00000578218 MROH1Q8NDA8 1641 aa39.35■■■■□ 3.89
THRA-208ENST00000578218 DUOX2Q9NRD8 1548 aa39.32■■■■□ 3.89
THRA-208ENST00000578218 PTPN23Q9H3S7 1636 aa39.3■■■■□ 3.88
THRA-208ENST00000578218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.3■■■■□ 3.88
THRA-208ENST00000578218 UBAP1LF5GYI3 381 aa39.29■■■■□ 3.88
THRA-208ENST00000578218 DEPDC5O75140 1603 aa39.27■■■■□ 3.88
THRA-208ENST00000578218 SHANK2Q9UPX8 1470 aa39.27■■■■□ 3.88
THRA-208ENST00000578218 ERVK-7P63135 1459 aa39.26■■■■□ 3.88
THRA-208ENST00000578218 CPS1P31327 1500 aa39.25■■■■□ 3.87
THRA-208ENST00000578218 APLP2Q06481 763 aa39.25■■■■□ 3.87
THRA-208ENST00000578218 THEMISQ8N1K5 641 aaPredicted RBP39.24■■■■□ 3.87
THRA-208ENST00000578218 ANKLE2Q86XL3 938 aa39.23■■■■□ 3.87
THRA-208ENST00000578218 IQGAP1P46940 1657 aa39.22■■■■□ 3.87
THRA-208ENST00000578218 PRDM15P57071 1507 aaPredicted RBP39.21■■■■□ 3.87
THRA-208ENST00000578218 KIF15Q9NS87 1388 aa39.21■■■■□ 3.87
THRA-208ENST00000578218 NPHP4O75161 1426 aaPredicted RBP39.18■■■■□ 3.86
THRA-208ENST00000578218 VWDEQ8N2E2 1590 aa39.17■■■■□ 3.86
THRA-208ENST00000578218 ERBINQ96RT1 1412 aa39.17■■■■□ 3.86
THRA-208ENST00000578218 CFAP65Q6ZU64 1925 aaKnown RBP39.17■■■■□ 3.86
THRA-208ENST00000578218 MED14O60244 1454 aa39.17■■■■□ 3.86
THRA-208ENST00000578218 ABCC5O15440 1437 aa39.16■■■■□ 3.86
THRA-208ENST00000578218 UBR1Q8IWV7 1749 aa39.14■■■■□ 3.86
THRA-208ENST00000578218 DAPK1P53355 1430 aa39.14■■■■□ 3.86
THRA-208ENST00000578218 FGD6Q6ZV73 1430 aa39.12■■■■□ 3.85
THRA-208ENST00000578218 ILDR2Q71H61 639 aa39.06■■■■□ 3.84
THRA-208ENST00000578218 RRP7BPQ9NSQ0 103 aa39.06■■■■□ 3.84
THRA-208ENST00000578218 SCAF1Q9H7N4 1312 aaKnown RBP39.06■■■■□ 3.84
THRA-208ENST00000578218 ARHGAP31Q2M1Z3 1444 aa39.02■■■■□ 3.84
THRA-208ENST00000578218 SYNMO15061 1565 aa39.01■■■■□ 3.84
THRA-208ENST00000578218 STRCP1A6NGW2 1772 aa38.98■■■■□ 3.83
THRA-208ENST00000578218 KANK1Q14678 1352 aa38.98■■■■□ 3.83
THRA-208ENST00000578218 SCAF11Q99590 1463 aaKnown RBP38.98■■■■□ 3.83
THRA-208ENST00000578218 TOM1O60784 492 aa38.97■■■■□ 3.83
THRA-208ENST00000578218 PIP4K2BP78356 416 aa38.97■■■■□ 3.83
THRA-208ENST00000578218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.97■■■■□ 3.83
THRA-208ENST00000578218 ANKRD30AQ9BXX3 1397 aa38.96■■■■□ 3.83
THRA-208ENST00000578218 PIK3C2BO00750 1634 aa38.95■■■■□ 3.83
THRA-208ENST00000578218 SLIT1O75093 1534 aa38.93■■■■□ 3.82
THRA-208ENST00000578218 CHIC2Q9UKJ5 165 aa38.91■■■■□ 3.82
THRA-208ENST00000578218 ARHGAP23Q9P227 1491 aa38.91■■■■□ 3.82
THRA-208ENST00000578218 LMTK2Q8IWU2 1503 aa38.89■■■■□ 3.82
THRA-208ENST00000578218 LRRC7Q96NW7 1537 aa38.86■■■■□ 3.81
THRA-208ENST00000578218 SOCS7O14512 581 aa38.86■■■■□ 3.81
THRA-208ENST00000578218 ALKQ9UM73 1620 aa38.85■■■■□ 3.81
THRA-208ENST00000578218 HSPA1LP34931 641 aa38.85■■■■□ 3.81
THRA-208ENST00000578218 KDM5AP29375 1690 aaKnown RBP38.84■■■■□ 3.81
THRA-208ENST00000578218 ADGRL2O95490 1459 aa38.84■■■■□ 3.81
THRA-208ENST00000578218 EFCAB6Q5THR3 1501 aa38.84■■■■□ 3.81
THRA-208ENST00000578218 MED1Q15648 1581 aaPredicted RBP38.8■■■■□ 3.8
THRA-208ENST00000578218 TXNDC2Q86VQ3 553 aa38.79■■■■□ 3.8
THRA-208ENST00000578218 STAG3Q9UJ98 1225 aa38.78■■■■□ 3.8
THRA-208ENST00000578218 EID1Q9Y6B2 187 aa38.78■■■■□ 3.8
THRA-208ENST00000578218 LTKP29376 864 aa38.77■■■■□ 3.8
THRA-208ENST00000578218 FAM50AQ14320 339 aaKnown RBP38.76■■■■□ 3.8
THRA-208ENST00000578218 TMEM2Q9UHN6 1383 aa38.74■■■■□ 3.79
THRA-208ENST00000578218 ADGRB3O60242 1522 aa38.73■■■■□ 3.79
THRA-208ENST00000578218 XIRP1Q702N8 1843 aaKnown RBP38.69■■■■□ 3.78
THRA-208ENST00000578218 NOS1P29475 1434 aa38.68■■■■□ 3.78
THRA-208ENST00000578218 ANKRD50Q9ULJ7 1429 aa38.67■■■■□ 3.78
THRA-208ENST00000578218 TET3O43151 1660 aa38.65■■■■□ 3.78
THRA-208ENST00000578218 IDI1Q13907 227 aa38.64■■■■□ 3.78
THRA-208ENST00000578218 RPRD2Q5VT52 1461 aaKnown RBP38.63■■■■□ 3.77
THRA-208ENST00000578218 GCC2Q8IWJ2 1684 aa38.61■■■■□ 3.77
THRA-208ENST00000578218 SENP3Q9H4L4 574 aaPredicted RBP38.6■■■■□ 3.77
THRA-208ENST00000578218 UNC13BO14795 1591 aa38.59■■■■□ 3.77
THRA-208ENST00000578218 MYO5BQ9ULV0 1848 aa38.56■■■■□ 3.76
THRA-208ENST00000578218 SLC52A1Q9NWF4 448 aa38.53■■■■□ 3.76
THRA-208ENST00000578218 NWD1Q149M9 1564 aa38.49■■■■□ 3.75
THRA-208ENST00000578218 PHF23Q9BUL5 403 aaPredicted RBP38.48■■■■□ 3.75
THRA-208ENST00000578218 SLC26A8Q96RN1 970 aa38.46■■■■□ 3.75
THRA-208ENST00000578218 TMEM94Q12767 1356 aa38.45■■■■□ 3.75
THRA-208ENST00000578218 NKTRP30414 1462 aaKnown RBP38.45■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms