RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 DHX29Q7Z478 1369 aaKnown RBP24.14■■□□□ 1.46
ERBB2-205ENST00000578199 ZCCHC11Q5TAX3 1644 aaKnown RBP24.13■■□□□ 1.45
ERBB2-205ENST00000578199 CLASP1Q7Z460 1538 aa24.11■■□□□ 1.45
ERBB2-205ENST00000578199 MAST1Q9Y2H9 1570 aa24.11■■□□□ 1.45
ERBB2-205ENST00000578199 CCDC144AA2RUR9 1427 aa24.1■■□□□ 1.45
ERBB2-205ENST00000578199 PLCH2O75038 1416 aa24.09■■□□□ 1.45
ERBB2-205ENST00000578199 PLA2R1Q13018 1463 aa24.09■■□□□ 1.45
ERBB2-205ENST00000578199 EFCAB2Q5VUJ9 269 aa24.08■■□□□ 1.45
ERBB2-205ENST00000578199 ROCK2O75116 1388 aaKnown RBP24.08■■□□□ 1.45
ERBB2-205ENST00000578199 NBPF1Q3BBV0 1214 aa24.07■■□□□ 1.44
ERBB2-205ENST00000578199 UNC13BO14795 1591 aa24.06■■□□□ 1.44
ERBB2-205ENST00000578199 TRAPPC8Q9Y2L5 1435 aa24.05■■□□□ 1.44
ERBB2-205ENST00000578199 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
ERBB2-205ENST00000578199 PLXNC1O60486 1568 aa24.04■■□□□ 1.44
ERBB2-205ENST00000578199 ARID4BQ4LE39 1312 aaPredicted RBP24.03■■□□□ 1.44
ERBB2-205ENST00000578199 AFAP1Q8N556 730 aa24.03■■□□□ 1.44
ERBB2-205ENST00000578199 UHRF1BP1LA0JNW5 1464 aa24.01■■□□□ 1.43
ERBB2-205ENST00000578199 DUOX2Q9NRD8 1548 aa24.01■■□□□ 1.43
ERBB2-205ENST00000578199 PRAG1Q86YV5 1406 aa24■■□□□ 1.43
ERBB2-205ENST00000578199 IQGAP3Q86VI3 1631 aa23.99■■□□□ 1.43
ERBB2-205ENST00000578199 ZBED9Q6R2W3 1325 aa23.99■■□□□ 1.43
ERBB2-205ENST00000578199 A2MP01023 1474 aa23.98■■□□□ 1.43
ERBB2-205ENST00000578199 ABCC1P33527 1531 aa23.98■■□□□ 1.43
ERBB2-205ENST00000578199 TRPM1Q7Z4N2 1603 aa23.96■■□□□ 1.43
ERBB2-205ENST00000578199 SPAG9O60271 1321 aaKnown RBP23.95■■□□□ 1.42
ERBB2-205ENST00000578199 ERBINQ96RT1 1412 aa23.95■■□□□ 1.42
ERBB2-205ENST00000578199 TMC1Q8TDI8 760 aa23.91■■□□□ 1.42
ERBB2-205ENST00000578199 MAGI2Q86UL8 1455 aa23.91■■□□□ 1.42
ERBB2-205ENST00000578199 PNISRQ8TF01 805 aaKnown RBP23.88■■□□□ 1.41
ERBB2-205ENST00000578199 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
ERBB2-205ENST00000578199 WDR7Q9Y4E6 1490 aa23.85■■□□□ 1.41
ERBB2-205ENST00000578199 ATP10AO60312 1499 aa23.84■■□□□ 1.41
ERBB2-205ENST00000578199 GPRASP1Q5JY77 1395 aa23.84■■□□□ 1.41
ERBB2-205ENST00000578199 TESK2Q96S53 571 aa23.83■■□□□ 1.41
ERBB2-205ENST00000578199 DISP3Q9P2K9 1392 aa23.83■■□□□ 1.41
ERBB2-205ENST00000578199 ZFYVE16Q7Z3T8 1539 aa23.83■■□□□ 1.4
ERBB2-205ENST00000578199 FANCAO15360 1455 aa23.82■■□□□ 1.4
ERBB2-205ENST00000578199 E9PCH4 1651 aa23.82■■□□□ 1.4
ERBB2-205ENST00000578199 MYBBP1AQ9BQG0 1328 aaKnown RBP23.8■■□□□ 1.4
ERBB2-205ENST00000578199 RTEL1-TNFRSF6BF6WH68 1400 aa23.8■■□□□ 1.4
ERBB2-205ENST00000578199 PRDM15P57071 1507 aaPredicted RBP23.79■■□□□ 1.4
ERBB2-205ENST00000578199 KIF3BO15066 747 aa23.79■■□□□ 1.4
ERBB2-205ENST00000578199 RALBP1Q15311 655 aa23.79■■□□□ 1.4
ERBB2-205ENST00000578199 SCAPERQ9BY12 1400 aa23.78■■□□□ 1.4
ERBB2-205ENST00000578199 PER1O15534 1290 aaPredicted RBP23.78■■□□□ 1.4
ERBB2-205ENST00000578199 RBM19Q9Y4C8 960 aaKnown RBP23.76■■□□□ 1.39
ERBB2-205ENST00000578199 ARAP3Q8WWN8 1544 aa23.76■■□□□ 1.39
ERBB2-205ENST00000578199 CC2D1BQ5T0F9 858 aaKnown RBP23.76■■□□□ 1.39
ERBB2-205ENST00000578199 ASXL2Q76L83 1435 aa23.75■■□□□ 1.39
ERBB2-205ENST00000578199 COL17A1Q9UMD9 1497 aaPredicted RBP23.74■■□□□ 1.39
ERBB2-205ENST00000578199 PANK3Q9H999 370 aa23.74■■□□□ 1.39
ERBB2-205ENST00000578199 PPP4R2Q9NY27 417 aa23.74■■□□□ 1.39
ERBB2-205ENST00000578199 ADGRL1O94910 1474 aa23.74■■□□□ 1.39
ERBB2-205ENST00000578199 ABCA9Q8IUA7 1624 aa23.74■■□□□ 1.39
ERBB2-205ENST00000578199 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
ERBB2-205ENST00000578199 EIF2AK4Q9P2K8 1649 aaKnown RBP23.74■■□□□ 1.39
ERBB2-205ENST00000578199 BRD4O60885 1362 aaPredicted RBP23.73■■□□□ 1.39
ERBB2-205ENST00000578199 SMG6Q86US8 1419 aaKnown RBP23.73■■□□□ 1.39
ERBB2-205ENST00000578199 B4GALNT3Q6L9W6 998 aa23.73■■□□□ 1.39
ERBB2-205ENST00000578199 NUDCQ9Y266 331 aa23.73■■□□□ 1.39
ERBB2-205ENST00000578199 KTN1Q86UP2 1357 aaKnown RBP23.73■■□□□ 1.39
ERBB2-205ENST00000578199 SALL2Q9Y467 1007 aaPredicted RBP23.72■■□□□ 1.39
ERBB2-205ENST00000578199 LAMC1P11047 1609 aa23.72■■□□□ 1.39
ERBB2-205ENST00000578199 TMF1P82094 1093 aa23.72■■□□□ 1.39
ERBB2-205ENST00000578199 LRPPRCP42704 1394 aaKnown RBP23.71■■□□□ 1.39
ERBB2-205ENST00000578199 PARD3Q8TEW0 1356 aa23.7■■□□□ 1.38
ERBB2-205ENST00000578199 ERICH6BQ5W0A0 696 aa23.7■■□□□ 1.38
ERBB2-205ENST00000578199 TRPM2O94759 1503 aa23.69■■□□□ 1.38
ERBB2-205ENST00000578199 CLTCL1P53675 1640 aa23.69■■□□□ 1.38
ERBB2-205ENST00000578199 INO80Q9ULG1 1556 aaPredicted RBP23.69■■□□□ 1.38
ERBB2-205ENST00000578199 SPHKAPQ2M3C7 1700 aa23.68■■□□□ 1.38
ERBB2-205ENST00000578199 NLRP13Q86W25 1043 aa23.68■■□□□ 1.38
ERBB2-205ENST00000578199 DEPDC5O75140 1603 aa23.68■■□□□ 1.38
ERBB2-205ENST00000578199 PTPRTO14522 1441 aa23.67■■□□□ 1.38
ERBB2-205ENST00000578199 KANK1Q14678 1352 aa23.67■■□□□ 1.38
ERBB2-205ENST00000578199 MADDQ8WXG6 1647 aa23.66■■□□□ 1.38
ERBB2-205ENST00000578199 RNF17Q9BXT8 1623 aaKnown RBP23.65■■□□□ 1.38
ERBB2-205ENST00000578199 CEP152O94986 1710 aa23.64■■□□□ 1.38
ERBB2-205ENST00000578199 TET3O43151 1660 aa23.64■■□□□ 1.37
ERBB2-205ENST00000578199 UGGT1Q9NYU2 1555 aa23.64■■□□□ 1.37
ERBB2-205ENST00000578199 NPM1P06748 294 aaKnown RBP eCLIP23.62■■□□□ 1.37
ERBB2-205ENST00000578199 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
ERBB2-205ENST00000578199 VWDEQ8N2E2 1590 aa23.6■■□□□ 1.37
ERBB2-205ENST00000578199 MROH1Q8NDA8 1641 aa23.59■■□□□ 1.37
ERBB2-205ENST00000578199 KIDINS220Q9ULH0 1771 aa23.58■■□□□ 1.36
ERBB2-205ENST00000578199 CFAP70Q5T0N1 1121 aa23.57■■□□□ 1.36
ERBB2-205ENST00000578199 IQGAP1P46940 1657 aa23.57■■□□□ 1.36
ERBB2-205ENST00000578199 RNF123Q5XPI4 1314 aa23.56■■□□□ 1.36
ERBB2-205ENST00000578199 WASHC2CQ9Y4E1 1318 aa23.56■■□□□ 1.36
ERBB2-205ENST00000578199 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
ERBB2-205ENST00000578199 SCAF11Q99590 1463 aaKnown RBP23.55■■□□□ 1.36
ERBB2-205ENST00000578199 GGT6Q6P531 493 aa23.53■■□□□ 1.36
ERBB2-205ENST00000578199 CDCA7LQ96GN5 454 aa23.52■■□□□ 1.36
ERBB2-205ENST00000578199 CD109Q6YHK3 1445 aa23.52■■□□□ 1.36
ERBB2-205ENST00000578199 CHGAP10645 457 aaKnown RBP23.52■■□□□ 1.35
ERBB2-205ENST00000578199 KNSTRNQ9Y448 316 aa23.52■■□□□ 1.35
ERBB2-205ENST00000578199 STAC3Q96MF2 364 aa23.51■■□□□ 1.35
ERBB2-205ENST00000578199 ZNF518AQ6AHZ1 1483 aa23.51■■□□□ 1.35
ERBB2-205ENST00000578199 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
ERBB2-205ENST00000578199 PPRC1Q5VV67 1664 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms