RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 MADDQ8WXG6 1647 aa10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 KDM4FA0A1W2PPD8 638 aa10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 SPDYE2BA6NHP3 402 aa10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 SPDYE6P0CI01 402 aa10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 MLECQ14165 292 aa10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 SPDYE2Q495Y8 402 aa10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 INO80Q9ULG1 1556 aaPredicted RBP10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 ATP10AO60312 1499 aa10.16□□□□□ -0.78
PPP4R1-207ENST00000578010 PTPN23Q9H3S7 1636 aa10.15□□□□□ -0.78
PPP4R1-207ENST00000578010 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
PPP4R1-207ENST00000578010 RRP7BPQ9NSQ0 103 aa10.15□□□□□ -0.78
PPP4R1-207ENST00000578010 CCDC141Q6ZP82 1450 aa10.15□□□□□ -0.78
PPP4R1-207ENST00000578010 MLH3Q9UHC1 1453 aa10.15□□□□□ -0.78
PPP4R1-207ENST00000578010 ADAMTSL3P82987 1691 aa10.15□□□□□ -0.79
PPP4R1-207ENST00000578010 ADGBQ8N7X0 1667 aa10.15□□□□□ -0.79
PPP4R1-207ENST00000578010 FGD6Q6ZV73 1430 aa10.14□□□□□ -0.79
PPP4R1-207ENST00000578010 ARHGEF5Q12774 1597 aa10.13□□□□□ -0.79
PPP4R1-207ENST00000578010 REREQ9P2R6 1566 aa10.13□□□□□ -0.79
PPP4R1-207ENST00000578010 CROCC2H7BZ55 1655 aa10.12□□□□□ -0.79
PPP4R1-207ENST00000578010 MBD5Q9P267 1494 aa10.11□□□□□ -0.79
PPP4R1-207ENST00000578010 GGT6Q6P531 493 aa10.11□□□□□ -0.79
PPP4R1-207ENST00000578010 ESF1Q9H501 851 aaKnown RBP10.11□□□□□ -0.79
PPP4R1-207ENST00000578010 DNMT1P26358 1616 aaKnown RBP10.09□□□□□ -0.79
PPP4R1-207ENST00000578010 KIF3BO15066 747 aa10.09□□□□□ -0.79
PPP4R1-207ENST00000578010 A2MP01023 1474 aa10.09□□□□□ -0.79
PPP4R1-207ENST00000578010 ABCC5O15440 1437 aa10.08□□□□□ -0.8
PPP4R1-207ENST00000578010 PTPRMP28827 1452 aa10.08□□□□□ -0.8
PPP4R1-207ENST00000578010 MAST1Q9Y2H9 1570 aa10.08□□□□□ -0.8
PPP4R1-207ENST00000578010 RTEL1-TNFRSF6BF6WH68 1400 aa10.07□□□□□ -0.8
PPP4R1-207ENST00000578010 AGLP35573 1532 aa10.07□□□□□ -0.8
PPP4R1-207ENST00000578010 PLXNC1O60486 1568 aa10.07□□□□□ -0.8
PPP4R1-207ENST00000578010 TCOF1Q13428 1488 aaKnown RBP10.06□□□□□ -0.8
PPP4R1-207ENST00000578010 ANKRD30AQ9BXX3 1397 aa10.06□□□□□ -0.8
PPP4R1-207ENST00000578010 DAPK1P53355 1430 aa10.06□□□□□ -0.8
PPP4R1-207ENST00000578010 CLTCQ00610 1675 aaKnown RBP10.06□□□□□ -0.8
PPP4R1-207ENST00000578010 DHX29Q7Z478 1369 aaKnown RBP10.05□□□□□ -0.8
PPP4R1-207ENST00000578010 SSUH2Q9Y2M2 353 aa10.05□□□□□ -0.8
PPP4R1-207ENST00000578010 SHANK2Q9UPX8 1470 aa10.04□□□□□ -0.8
PPP4R1-207ENST00000578010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.04□□□□□ -0.8
PPP4R1-207ENST00000578010 C3P01024 1663 aa10.04□□□□□ -0.8
PPP4R1-207ENST00000578010 ZNF692Q9BU19 519 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-207ENST00000578010 RRBP1Q9P2E9 1410 aaKnown RBP10.03□□□□□ -0.8
PPP4R1-207ENST00000578010 EIF2AK4Q9P2K8 1649 aaKnown RBP10.03□□□□□ -0.8
PPP4R1-207ENST00000578010 MROH2AA6NES4 1674 aa10.02□□□□□ -0.8
PPP4R1-207ENST00000578010 KIF15Q9NS87 1388 aa10.02□□□□□ -0.8
PPP4R1-207ENST00000578010 PTPRKQ15262 1439 aa10.02□□□□□ -0.81
PPP4R1-207ENST00000578010 WASHC2CQ9Y4E1 1318 aa10.02□□□□□ -0.81
PPP4R1-207ENST00000578010 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.81
PPP4R1-207ENST00000578010 NCOA1Q15788 1441 aa10.01□□□□□ -0.81
PPP4R1-207ENST00000578010 CEBPAP49715 358 aaPredicted RBP10.01□□□□□ -0.81
PPP4R1-207ENST00000578010 TRIM52Q96A61 297 aa10.01□□□□□ -0.81
PPP4R1-207ENST00000578010 PREX1Q8TCU6 1659 aa10.01□□□□□ -0.81
PPP4R1-207ENST00000578010 CNTLNQ9NXG0 1405 aa10□□□□□ -0.81
PPP4R1-207ENST00000578010 CEP152O94986 1710 aa10□□□□□ -0.81
PPP4R1-207ENST00000578010 REM2Q8IYK8 340 aaPredicted RBP10□□□□□ -0.81
PPP4R1-207ENST00000578010 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
PPP4R1-207ENST00000578010 RNF17Q9BXT8 1623 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-207ENST00000578010 ZC3H13Q5T200 1668 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-207ENST00000578010 KDM5DQ9BY66 1539 aa9.98□□□□□ -0.81
PPP4R1-207ENST00000578010 ROCK1Q13464 1354 aa9.97□□□□□ -0.81
PPP4R1-207ENST00000578010 ERBINQ96RT1 1412 aa9.97□□□□□ -0.81
PPP4R1-207ENST00000578010 KANK1Q14678 1352 aa9.96□□□□□ -0.82
PPP4R1-207ENST00000578010 ANKRD50Q9ULJ7 1429 aa9.96□□□□□ -0.82
PPP4R1-207ENST00000578010 ADGRL2O95490 1459 aa9.96□□□□□ -0.82
PPP4R1-207ENST00000578010 FAM135AQ9P2D6 1515 aa9.96□□□□□ -0.82
PPP4R1-207ENST00000578010 ZMYM3Q14202 1370 aa9.95□□□□□ -0.82
PPP4R1-207ENST00000578010 UHRF1BP1Q6BDS2 1440 aa9.95□□□□□ -0.82
PPP4R1-207ENST00000578010 CAMSAP1Q5T5Y3 1602 aa9.95□□□□□ -0.82
PPP4R1-207ENST00000578010 DEPDC5O75140 1603 aa9.94□□□□□ -0.82
PPP4R1-207ENST00000578010 MROH1Q8NDA8 1641 aa9.94□□□□□ -0.82
PPP4R1-207ENST00000578010 MYO3AQ8NEV4 1616 aa9.94□□□□□ -0.82
PPP4R1-207ENST00000578010 PRDM15P57071 1507 aaPredicted RBP9.94□□□□□ -0.82
PPP4R1-207ENST00000578010 LMTK3Q96Q04 1460 aa9.94□□□□□ -0.82
PPP4R1-207ENST00000578010 NUP155O75694 1391 aa9.94□□□□□ -0.82
PPP4R1-207ENST00000578010 FBXO31Q5XUX0 539 aaPredicted RBP9.94□□□□□ -0.82
PPP4R1-207ENST00000578010 ABCC3O15438 1527 aa9.93□□□□□ -0.82
PPP4R1-207ENST00000578010 CFAP65Q6ZU64 1925 aaKnown RBP9.92□□□□□ -0.82
PPP4R1-207ENST00000578010 SPDYE4A6NLX3 237 aa9.92□□□□□ -0.82
PPP4R1-207ENST00000578010 SETD1BQ9UPS6 1966 aaKnown RBP9.92□□□□□ -0.82
PPP4R1-207ENST00000578010 ZNF142P52746 1687 aaPredicted RBP9.91□□□□□ -0.82
PPP4R1-207ENST00000578010 GCC2Q8IWJ2 1684 aa9.91□□□□□ -0.82
PPP4R1-207ENST00000578010 HSPA2P54652 639 aa9.91□□□□□ -0.82
PPP4R1-207ENST00000578010 CHRDL2Q6WN34 429 aa9.91□□□□□ -0.82
PPP4R1-207ENST00000578010 PCGF6Q9BYE7 350 aa9.91□□□□□ -0.82
PPP4R1-207ENST00000578010 PZPP20742 1482 aa9.91□□□□□ -0.82
PPP4R1-207ENST00000578010 NPATQ14207 1427 aa9.9□□□□□ -0.82
PPP4R1-207ENST00000578010 NAIPQ13075 1403 aa9.9□□□□□ -0.83
PPP4R1-207ENST00000578010 SETD5Q9C0A6 1442 aa9.9□□□□□ -0.83
PPP4R1-207ENST00000578010 UNC13BO14795 1591 aa9.89□□□□□ -0.83
PPP4R1-207ENST00000578010 CEP170BQ9Y4F5 1589 aaPredicted RBP9.89□□□□□ -0.83
PPP4R1-207ENST00000578010 SPDYE1Q8NFV5 336 aaPredicted RBP9.89□□□□□ -0.83
PPP4R1-207ENST00000578010 ACIN1Q9UKV3 1341 aaKnown RBP9.88□□□□□ -0.83
PPP4R1-207ENST00000578010 PKD2Q13563 968 aa9.88□□□□□ -0.83
PPP4R1-207ENST00000578010 MPHOSPH9Q99550 1183 aa9.88□□□□□ -0.83
PPP4R1-207ENST00000578010 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
PPP4R1-207ENST00000578010 HFM1A2PYH4 1435 aa9.88□□□□□ -0.83
PPP4R1-207ENST00000578010 TNRQ92752 1358 aa9.88□□□□□ -0.83
PPP4R1-207ENST00000578010 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
PPP4R1-207ENST00000578010 HRCP23327 699 aa9.87□□□□□ -0.83
PPP4R1-207ENST00000578010 EFCAB6Q5THR3 1501 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms