RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 SMG6Q86US8 1419 aaKnown RBP19.6■□□□□ 0.73
CUEDC1-206ENST00000577830 DAXXQ9UER7 740 aaPredicted RBP19.6■□□□□ 0.73
CUEDC1-206ENST00000577830 GCC2Q8IWJ2 1684 aa19.59■□□□□ 0.73
CUEDC1-206ENST00000577830 IPO9Q96P70 1041 aaKnown RBP19.59■□□□□ 0.73
CUEDC1-206ENST00000577830 PZPP20742 1482 aa19.59■□□□□ 0.73
CUEDC1-206ENST00000577830 RRP1P56182 461 aaKnown RBP19.58■□□□□ 0.73
CUEDC1-206ENST00000577830 MYBBP1AQ9BQG0 1328 aaKnown RBP19.58■□□□□ 0.72
CUEDC1-206ENST00000577830 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
CUEDC1-206ENST00000577830 PANK3Q9H999 370 aa19.54■□□□□ 0.72
CUEDC1-206ENST00000577830 RTN4Q9NQC3 1192 aaKnown RBP19.54■□□□□ 0.72
CUEDC1-206ENST00000577830 RALBP1Q15311 655 aa19.53■□□□□ 0.72
CUEDC1-206ENST00000577830 NLRP13Q86W25 1043 aa19.52■□□□□ 0.72
CUEDC1-206ENST00000577830 KTN1Q86UP2 1357 aaKnown RBP19.52■□□□□ 0.72
CUEDC1-206ENST00000577830 ERCC6L2Q5T890 1561 aa19.51■□□□□ 0.71
CUEDC1-206ENST00000577830 DNMT1P26358 1616 aaKnown RBP19.5■□□□□ 0.71
CUEDC1-206ENST00000577830 SLC4A3P48751 1232 aa19.5■□□□□ 0.71
CUEDC1-206ENST00000577830 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
CUEDC1-206ENST00000577830 C9orf84Q5VXU9 1444 aa19.49■□□□□ 0.71
CUEDC1-206ENST00000577830 PDE4AP27815 886 aa19.49■□□□□ 0.71
CUEDC1-206ENST00000577830 CRBNQ96SW2 442 aa19.49■□□□□ 0.71
CUEDC1-206ENST00000577830 NEFMP07197 916 aa19.48■□□□□ 0.71
CUEDC1-206ENST00000577830 ABCA8O94911 1581 aa19.47■□□□□ 0.71
CUEDC1-206ENST00000577830 BCORL1Q5H9F3 1711 aa19.46■□□□□ 0.71
CUEDC1-206ENST00000577830 WDR43Q15061 677 aaKnown RBP eCLIP19.45■□□□□ 0.7
CUEDC1-206ENST00000577830 RGS3P49796 1198 aa19.45■□□□□ 0.7
CUEDC1-206ENST00000577830 CCDC146Q8IYE0 955 aa19.45■□□□□ 0.7
CUEDC1-206ENST00000577830 C20orf194Q5TEA3 1177 aa19.44■□□□□ 0.7
CUEDC1-206ENST00000577830 CHD1O14646 1710 aa19.44■□□□□ 0.7
CUEDC1-206ENST00000577830 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
CUEDC1-206ENST00000577830 BRD4O60885 1362 aaPredicted RBP19.42■□□□□ 0.7
CUEDC1-206ENST00000577830 ABCC10Q5T3U5 1492 aa19.42■□□□□ 0.7
CUEDC1-206ENST00000577830 ADAMTS8Q9UP79 889 aa19.41■□□□□ 0.7
CUEDC1-206ENST00000577830 KNSTRNQ9Y448 316 aa19.41■□□□□ 0.7
CUEDC1-206ENST00000577830 TMF1P82094 1093 aa19.4■□□□□ 0.7
CUEDC1-206ENST00000577830 ARID4BQ4LE39 1312 aaPredicted RBP19.39■□□□□ 0.7
CUEDC1-206ENST00000577830 TCERG1O14776 1098 aaKnown RBP19.39■□□□□ 0.69
CUEDC1-206ENST00000577830 ARHGAP5Q13017 1502 aa19.38■□□□□ 0.69
CUEDC1-206ENST00000577830 TNNT2P45379 298 aaPredicted RBP19.38■□□□□ 0.69
CUEDC1-206ENST00000577830 RNF123Q5XPI4 1314 aa19.38■□□□□ 0.69
CUEDC1-206ENST00000577830 NEUROD2Q15784 382 aa19.37■□□□□ 0.69
CUEDC1-206ENST00000577830 AFAP1Q8N556 730 aa19.37■□□□□ 0.69
CUEDC1-206ENST00000577830 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
CUEDC1-206ENST00000577830 DISP3Q9P2K9 1392 aa19.36■□□□□ 0.69
CUEDC1-206ENST00000577830 CHGAP10645 457 aaKnown RBP19.34■□□□□ 0.69
CUEDC1-206ENST00000577830 EFCAB2Q5VUJ9 269 aa19.33■□□□□ 0.69
CUEDC1-206ENST00000577830 CDC42BPAQ5VT25 1732 aa19.33■□□□□ 0.68
CUEDC1-206ENST00000577830 RALGAPBQ86X10 1494 aa19.32■□□□□ 0.68
CUEDC1-206ENST00000577830 BACH2Q9BYV9 841 aa19.32■□□□□ 0.68
CUEDC1-206ENST00000577830 PER1O15534 1290 aaPredicted RBP19.32■□□□□ 0.68
CUEDC1-206ENST00000577830 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
CUEDC1-206ENST00000577830 MBD5Q9P267 1494 aa19.31■□□□□ 0.68
CUEDC1-206ENST00000577830 KDM5CP41229 1560 aa19.3■□□□□ 0.68
CUEDC1-206ENST00000577830 PDE3BQ13370 1112 aa19.3■□□□□ 0.68
CUEDC1-206ENST00000577830 IL27Q8NEV9 243 aa19.3■□□□□ 0.68
CUEDC1-206ENST00000577830 SYCP2Q9BX26 1530 aa19.3■□□□□ 0.68
CUEDC1-206ENST00000577830 LRPPRCP42704 1394 aaKnown RBP19.3■□□□□ 0.68
CUEDC1-206ENST00000577830 ADGRL2O95490 1459 aa19.29■□□□□ 0.68
CUEDC1-206ENST00000577830 CCDC141Q6ZP82 1450 aa19.29■□□□□ 0.68
CUEDC1-206ENST00000577830 ADCY10Q96PN6 1610 aa19.27■□□□□ 0.68
CUEDC1-206ENST00000577830 TESK2Q96S53 571 aa19.27■□□□□ 0.67
CUEDC1-206ENST00000577830 RSPH4AQ5TD94 716 aa19.26■□□□□ 0.67
CUEDC1-206ENST00000577830 TTC37Q6PGP7 1564 aa19.26■□□□□ 0.67
CUEDC1-206ENST00000577830 APAF1O14727 1248 aa19.25■□□□□ 0.67
CUEDC1-206ENST00000577830 PLEKHH2Q8IVE3 1493 aa19.25■□□□□ 0.67
CUEDC1-206ENST00000577830 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
CUEDC1-206ENST00000577830 FRAT1Q92837 279 aaPredicted RBP19.25■□□□□ 0.67
CUEDC1-206ENST00000577830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.24■□□□□ 0.67
CUEDC1-206ENST00000577830 PPP2R1AP30153 589 aa19.24■□□□□ 0.67
CUEDC1-206ENST00000577830 SPAG9O60271 1321 aaKnown RBP19.24■□□□□ 0.67
CUEDC1-206ENST00000577830 GOLGA2Q08379 1002 aa19.23■□□□□ 0.67
CUEDC1-206ENST00000577830 ABCC2Q92887 1545 aa19.23■□□□□ 0.67
CUEDC1-206ENST00000577830 UHRF1BP1Q6BDS2 1440 aa19.23■□□□□ 0.67
CUEDC1-206ENST00000577830 PARD3Q8TEW0 1356 aa19.23■□□□□ 0.67
CUEDC1-206ENST00000577830 RRP7AQ9Y3A4 280 aaKnown RBP19.22■□□□□ 0.67
CUEDC1-206ENST00000577830 ARXQ96QS3 562 aa19.22■□□□□ 0.67
CUEDC1-206ENST00000577830 PRAG1Q86YV5 1406 aa19.21■□□□□ 0.67
CUEDC1-206ENST00000577830 ERBINQ96RT1 1412 aa19.21■□□□□ 0.67
CUEDC1-206ENST00000577830 BCAR3O75815 825 aa19.21■□□□□ 0.67
CUEDC1-206ENST00000577830 ADGBQ8N7X0 1667 aa19.2■□□□□ 0.66
CUEDC1-206ENST00000577830 TRAPPC8Q9Y2L5 1435 aa19.2■□□□□ 0.66
CUEDC1-206ENST00000577830 NPM1P06748 294 aaKnown RBP eCLIP19.19■□□□□ 0.66
CUEDC1-206ENST00000577830 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.19■□□□□ 0.66
CUEDC1-206ENST00000577830 ARHGEF12Q9NZN5 1544 aa19.18■□□□□ 0.66
CUEDC1-206ENST00000577830 SHANK2Q9UPX8 1470 aa19.18■□□□□ 0.66
CUEDC1-206ENST00000577830 KIF3BO15066 747 aa19.18■□□□□ 0.66
CUEDC1-206ENST00000577830 BCL2L13Q9BXK5 485 aa19.18■□□□□ 0.66
CUEDC1-206ENST00000577830 FAM135AQ9P2D6 1515 aa19.18■□□□□ 0.66
CUEDC1-206ENST00000577830 CDC42BPBQ9Y5S2 1711 aa19.18■□□□□ 0.66
CUEDC1-206ENST00000577830 MS4A1P11836 297 aa19.17■□□□□ 0.66
CUEDC1-206ENST00000577830 CROCC2H7BZ55 1655 aa19.16■□□□□ 0.66
CUEDC1-206ENST00000577830 PPM1GO15355 546 aaPredicted RBP19.16■□□□□ 0.66
CUEDC1-206ENST00000577830 SPINK5Q9NQ38 1064 aaPredicted RBP19.16■□□□□ 0.66
CUEDC1-206ENST00000577830 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
CUEDC1-206ENST00000577830 DDRGK1Q96HY6 314 aa19.15■□□□□ 0.66
CUEDC1-206ENST00000577830 PLEKHH1Q9ULM0 1364 aa19.15■□□□□ 0.66
CUEDC1-206ENST00000577830 NUTM2DQ5VT03 806 aaPredicted RBP19.15■□□□□ 0.66
CUEDC1-206ENST00000577830 CFAP70Q5T0N1 1121 aa19.14■□□□□ 0.66
CUEDC1-206ENST00000577830 DUSP27Q5VZP5 1158 aa19.14■□□□□ 0.66
CUEDC1-206ENST00000577830 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.14■□□□□ 0.66
CUEDC1-206ENST00000577830 PLCH2O75038 1416 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms