RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-208ENST00000577524 MBD5Q9P267 1494 aa8.38□□□□□ -1.07
ARHGAP28-208ENST00000577524 KIDINS220Q9ULH0 1771 aa8.38□□□□□ -1.07
ARHGAP28-208ENST00000577524 MYOM3Q5VTT5 1437 aa8.37□□□□□ -1.07
ARHGAP28-208ENST00000577524 MIA2Q96PC5 1412 aa8.37□□□□□ -1.07
ARHGAP28-208ENST00000577524 ZMYM3Q14202 1370 aa8.36□□□□□ -1.07
ARHGAP28-208ENST00000577524 WASHC2CQ9Y4E1 1318 aa8.36□□□□□ -1.07
ARHGAP28-208ENST00000577524 SIGLEC1Q9BZZ2 1709 aa8.36□□□□□ -1.07
ARHGAP28-208ENST00000577524 INO80Q9ULG1 1556 aaPredicted RBP8.35□□□□□ -1.07
ARHGAP28-208ENST00000577524 FAM50AQ14320 339 aaKnown RBP8.34□□□□□ -1.07
ARHGAP28-208ENST00000577524 ILDR1Q86SU0 546 aaPredicted RBP8.34□□□□□ -1.07
ARHGAP28-208ENST00000577524 ADGBQ8N7X0 1667 aa8.34□□□□□ -1.08
ARHGAP28-208ENST00000577524 ARHGEF5Q12774 1597 aa8.33□□□□□ -1.08
ARHGAP28-208ENST00000577524 NPATQ14207 1427 aa8.33□□□□□ -1.08
ARHGAP28-208ENST00000577524 RRP7BPQ9NSQ0 103 aa8.32□□□□□ -1.08
ARHGAP28-208ENST00000577524 PREX1Q8TCU6 1659 aa8.32□□□□□ -1.08
ARHGAP28-208ENST00000577524 PLXNC1O60486 1568 aa8.31□□□□□ -1.08
ARHGAP28-208ENST00000577524 FBXO41Q8TF61 875 aa8.31□□□□□ -1.08
ARHGAP28-208ENST00000577524 CHIC2Q9UKJ5 165 aa8.31□□□□□ -1.08
ARHGAP28-208ENST00000577524 FGD6Q6ZV73 1430 aa8.3□□□□□ -1.08
ARHGAP28-208ENST00000577524 KANK1Q14678 1352 aa8.3□□□□□ -1.08
ARHGAP28-208ENST00000577524 ANKRD30AQ9BXX3 1397 aa8.3□□□□□ -1.08
ARHGAP28-208ENST00000577524 KIF15Q9NS87 1388 aa8.3□□□□□ -1.08
ARHGAP28-208ENST00000577524 C3P01024 1663 aa8.3□□□□□ -1.08
ARHGAP28-208ENST00000577524 ABCB7O75027 752 aa8.29□□□□□ -1.08
ARHGAP28-208ENST00000577524 PKD2Q13563 968 aa8.29□□□□□ -1.08
ARHGAP28-208ENST00000577524 TNRQ92752 1358 aa8.29□□□□□ -1.08
ARHGAP28-208ENST00000577524 SETD1BQ9UPS6 1966 aaKnown RBP8.29□□□□□ -1.08
ARHGAP28-208ENST00000577524 PTPN23Q9H3S7 1636 aa8.29□□□□□ -1.08
ARHGAP28-208ENST00000577524 KDM5DQ9BY66 1539 aa8.29□□□□□ -1.08
ARHGAP28-208ENST00000577524 PTPRKQ15262 1439 aa8.29□□□□□ -1.08
ARHGAP28-208ENST00000577524 MROH2AA6NES4 1674 aa8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 CLTCQ00610 1675 aaKnown RBP8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 FBXO31Q5XUX0 539 aaPredicted RBP8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 THEMISQ8N1K5 641 aaPredicted RBP8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 CERKQ8TCT0 537 aa8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 SLC4A1APQ9BWU0 796 aaKnown RBP8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 ZNF219Q9P2Y4 722 aaPredicted RBP8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 DUOX2Q9NRD8 1548 aa8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 FAM135AQ9P2D6 1515 aa8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 ABCC5O15440 1437 aa8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 DAPK1P53355 1430 aa8.28□□□□□ -1.08
ARHGAP28-208ENST00000577524 MAST1Q9Y2H9 1570 aa8.27□□□□□ -1.09
ARHGAP28-208ENST00000577524 STAG3Q9UJ98 1225 aa8.27□□□□□ -1.09
ARHGAP28-208ENST00000577524 NCKAP5LQ9HCH0 1330 aa8.27□□□□□ -1.09
ARHGAP28-208ENST00000577524 SHANK2Q9UPX8 1470 aa8.26□□□□□ -1.09
ARHGAP28-208ENST00000577524 ANKLE2Q86XL3 938 aa8.26□□□□□ -1.09
ARHGAP28-208ENST00000577524 PPARGC1BQ86YN6 1023 aaKnown RBP8.26□□□□□ -1.09
ARHGAP28-208ENST00000577524 PTPRTO14522 1441 aa8.26□□□□□ -1.09
ARHGAP28-208ENST00000577524 ERBINQ96RT1 1412 aa8.26□□□□□ -1.09
ARHGAP28-208ENST00000577524 PZPP20742 1482 aa8.26□□□□□ -1.09
ARHGAP28-208ENST00000577524 TCOF1Q13428 1488 aaKnown RBP8.26□□□□□ -1.09
ARHGAP28-208ENST00000577524 ITGAEP38570 1179 aa8.25□□□□□ -1.09
ARHGAP28-208ENST00000577524 SAMD1Q6SPF0 538 aaPredicted RBP8.25□□□□□ -1.09
ARHGAP28-208ENST00000577524 NCOA1Q15788 1441 aa8.25□□□□□ -1.09
ARHGAP28-208ENST00000577524 A2ML1A8K2U0 1454 aa8.25□□□□□ -1.09
ARHGAP28-208ENST00000577524 CAMSAP1Q5T5Y3 1602 aa8.25□□□□□ -1.09
ARHGAP28-208ENST00000577524 CEP170BQ9Y4F5 1589 aaPredicted RBP8.23□□□□□ -1.09
ARHGAP28-208ENST00000577524 DNMT1P26358 1616 aaKnown RBP8.23□□□□□ -1.09
ARHGAP28-208ENST00000577524 EIF2AK4Q9P2K8 1649 aaKnown RBP8.23□□□□□ -1.09
ARHGAP28-208ENST00000577524 PLA2R1Q13018 1463 aa8.23□□□□□ -1.09
ARHGAP28-208ENST00000577524 NLRP1Q9C000 1473 aa8.23□□□□□ -1.09
ARHGAP28-208ENST00000577524 MYO3AQ8NEV4 1616 aa8.22□□□□□ -1.09
ARHGAP28-208ENST00000577524 EID1Q9Y6B2 187 aa8.22□□□□□ -1.09
ARHGAP28-208ENST00000577524 ABCC3O15438 1527 aa8.22□□□□□ -1.09
ARHGAP28-208ENST00000577524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.22□□□□□ -1.09
ARHGAP28-208ENST00000577524 RNF17Q9BXT8 1623 aaKnown RBP8.21□□□□□ -1.1
ARHGAP28-208ENST00000577524 ZC3H13Q5T200 1668 aaKnown RBP8.21□□□□□ -1.1
ARHGAP28-208ENST00000577524 ANKRD50Q9ULJ7 1429 aa8.2□□□□□ -1.1
ARHGAP28-208ENST00000577524 UGGT1Q9NYU2 1555 aa8.2□□□□□ -1.1
ARHGAP28-208ENST00000577524 ERVK-7P63135 1459 aa8.19□□□□□ -1.1
ARHGAP28-208ENST00000577524 CROCC2H7BZ55 1655 aa8.19□□□□□ -1.1
ARHGAP28-208ENST00000577524 BCANQ96GW7 911 aa8.19□□□□□ -1.1
ARHGAP28-208ENST00000577524 ZNF335Q9H4Z2 1342 aaPredicted RBP8.19□□□□□ -1.1
ARHGAP28-208ENST00000577524 ARHGAP31Q2M1Z3 1444 aa8.19□□□□□ -1.1
ARHGAP28-208ENST00000577524 ADGRL2O95490 1459 aa8.19□□□□□ -1.1
ARHGAP28-208ENST00000577524 ZNF142P52746 1687 aaPredicted RBP8.18□□□□□ -1.1
ARHGAP28-208ENST00000577524 STRCQ7RTU9 1775 aa8.18□□□□□ -1.1
ARHGAP28-208ENST00000577524 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
ARHGAP28-208ENST00000577524 POTEHQ6S545 545 aa8.18□□□□□ -1.1
ARHGAP28-208ENST00000577524 TXNDC2Q86VQ3 553 aa8.18□□□□□ -1.1
ARHGAP28-208ENST00000577524 ROCK1Q13464 1354 aa8.18□□□□□ -1.1
ARHGAP28-208ENST00000577524 PRDM15P57071 1507 aaPredicted RBP8.18□□□□□ -1.1
ARHGAP28-208ENST00000577524 UBAP1LF5GYI3 381 aa8.17□□□□□ -1.1
ARHGAP28-208ENST00000577524 MYCNP04198 464 aaPredicted RBP8.17□□□□□ -1.1
ARHGAP28-208ENST00000577524 CHGAP10645 457 aaKnown RBP8.17□□□□□ -1.1
ARHGAP28-208ENST00000577524 SLC52A1Q9NWF4 448 aa8.17□□□□□ -1.1
ARHGAP28-208ENST00000577524 NPHP4O75161 1426 aaPredicted RBP8.17□□□□□ -1.1
ARHGAP28-208ENST00000577524 SPATA31D1Q6ZQQ2 1576 aa8.17□□□□□ -1.1
ARHGAP28-208ENST00000577524 PPP1R15AO75807 674 aaPredicted RBP8.16□□□□□ -1.1
ARHGAP28-208ENST00000577524 MROH1Q8NDA8 1641 aa8.15□□□□□ -1.1
ARHGAP28-208ENST00000577524 NUP155O75694 1391 aa8.15□□□□□ -1.1
ARHGAP28-208ENST00000577524 TOM1O60784 492 aa8.15□□□□□ -1.1
ARHGAP28-208ENST00000577524 IDI1Q13907 227 aa8.15□□□□□ -1.1
ARHGAP28-208ENST00000577524 CEP152O94986 1710 aa8.15□□□□□ -1.11
ARHGAP28-208ENST00000577524 LMTK2Q8IWU2 1503 aa8.14□□□□□ -1.11
ARHGAP28-208ENST00000577524 IQSEC2Q5JU85 1478 aa8.14□□□□□ -1.11
ARHGAP28-208ENST00000577524 SCAF11Q99590 1463 aaKnown RBP8.13□□□□□ -1.11
ARHGAP28-208ENST00000577524 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
ARHGAP28-208ENST00000577524 RPRD2Q5VT52 1461 aaKnown RBP8.13□□□□□ -1.11
ARHGAP28-208ENST00000577524 TMEM2Q9UHN6 1383 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms