RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TEX14Q8IWB6 1497 aa10.45□□□□□ -0.74
NUP88-212ENST00000576708 MFRPQ9BY79 579 aa10.45□□□□□ -0.74
NUP88-212ENST00000576708 TRIM35Q9UPQ4 493 aa10.45□□□□□ -0.74
NUP88-212ENST00000576708 CD109Q6YHK3 1445 aa10.44□□□□□ -0.74
NUP88-212ENST00000576708 ATMINO43313 823 aaPredicted RBP10.44□□□□□ -0.74
NUP88-212ENST00000576708 PHF8Q9UPP1 1060 aa10.44□□□□□ -0.74
NUP88-212ENST00000576708 ATP10BO94823 1461 aa10.43□□□□□ -0.74
NUP88-212ENST00000576708 ADGRL1O94910 1474 aa10.42□□□□□ -0.74
NUP88-212ENST00000576708 MKRN3Q13064 507 aaKnown RBP10.42□□□□□ -0.74
NUP88-212ENST00000576708 SAMD9Q5K651 1589 aa10.42□□□□□ -0.74
NUP88-212ENST00000576708 ASTLQ6HA08 431 aaPredicted RBP10.41□□□□□ -0.74
NUP88-212ENST00000576708 MAGI3Q5TCQ9 1506 aa10.41□□□□□ -0.74
NUP88-212ENST00000576708 CFAP43Q8NDM7 1665 aa10.41□□□□□ -0.74
NUP88-212ENST00000576708 SOX12O15370 315 aa10.4□□□□□ -0.74
NUP88-212ENST00000576708 EEA1Q15075 1411 aa10.4□□□□□ -0.75
NUP88-212ENST00000576708 FHOD3Q2V2M9 1422 aa10.4□□□□□ -0.75
NUP88-212ENST00000576708 NLRP6P59044 892 aa10.39□□□□□ -0.75
NUP88-212ENST00000576708 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
NUP88-212ENST00000576708 TSHZ2Q9NRE2 1034 aa10.39□□□□□ -0.75
NUP88-212ENST00000576708 RAPGEF6Q8TEU7 1601 aa10.38□□□□□ -0.75
NUP88-212ENST00000576708 FBXO22Q8NEZ5 403 aa10.38□□□□□ -0.75
NUP88-212ENST00000576708 POTEMA6NI47 508 aa10.37□□□□□ -0.75
NUP88-212ENST00000576708 RYDENQ9NUL5 291 aaKnown RBP10.36□□□□□ -0.75
NUP88-212ENST00000576708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.752e-6■■■□□ 17.4
NUP88-212ENST00000576708 NUP153P49790 1475 aaKnown RBP10.36□□□□□ -0.75
NUP88-212ENST00000576708 PPP1R37O75864 691 aa10.35□□□□□ -0.75
NUP88-212ENST00000576708 MS4A4AQ96JQ5 239 aa10.35□□□□□ -0.75
NUP88-212ENST00000576708 ABCA9Q8IUA7 1624 aa10.34□□□□□ -0.75
NUP88-212ENST00000576708 KIF21BO75037 1637 aa10.33□□□□□ -0.76
NUP88-212ENST00000576708 RAPGEF3O95398 923 aa10.33□□□□□ -0.76
NUP88-212ENST00000576708 POTEGQ6S5H5 508 aa10.33□□□□□ -0.76
NUP88-212ENST00000576708 ARAP3Q8WWN8 1544 aa10.32□□□□□ -0.76
NUP88-212ENST00000576708 UBTFP17480 764 aaKnown RBP10.31□□□□□ -0.76
NUP88-212ENST00000576708 PLEKHD1A6NEE1 506 aa10.3□□□□□ -0.76
NUP88-212ENST00000576708 DPY19L2Q6NUT2 758 aa10.3□□□□□ -0.76
NUP88-212ENST00000576708 EFCAB5A4FU69 1503 aa10.29□□□□□ -0.76
NUP88-212ENST00000576708 ATP1B4Q9UN42 357 aaPredicted RBP10.29□□□□□ -0.76
NUP88-212ENST00000576708 CDK13Q14004 1512 aaKnown RBP10.28□□□□□ -0.76
NUP88-212ENST00000576708 IRX5P78411 483 aaPredicted RBP10.28□□□□□ -0.76
NUP88-212ENST00000576708 NEO1Q92859 1461 aa10.28□□□□□ -0.76
NUP88-212ENST00000576708 PHLDB1Q86UU1 1377 aa10.27□□□□□ -0.76
NUP88-212ENST00000576708 FRMPD1Q5SYB0 1578 aa10.27□□□□□ -0.76
NUP88-212ENST00000576708 POTEJP0CG39 1038 aa10.27□□□□□ -0.77
NUP88-212ENST00000576708 IER5LQ5T953 404 aa10.27□□□□□ -0.77
NUP88-212ENST00000576708 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
NUP88-212ENST00000576708 PDCD7Q8N8D1 485 aaKnown RBP10.27□□□□□ -0.77
NUP88-212ENST00000576708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.27□□□□□ -0.77
NUP88-212ENST00000576708 HECW2Q9P2P5 1572 aa10.26□□□□□ -0.77
NUP88-212ENST00000576708 SEC24BO95487 1268 aa10.26□□□□□ -0.77
NUP88-212ENST00000576708 OCEL1Q9H607 264 aa10.26□□□□□ -0.77
NUP88-212ENST00000576708 COLQQ9Y215 455 aaPredicted RBP10.26□□□□□ -0.77
NUP88-212ENST00000576708 KDM2AQ9Y2K7 1162 aa10.26□□□□□ -0.77
NUP88-212ENST00000576708 TTC37Q6PGP7 1564 aa10.26□□□□□ -0.77
NUP88-212ENST00000576708 ARHGAP35Q9NRY4 1499 aa10.25□□□□□ -0.77
NUP88-212ENST00000576708 PLCG2P16885 1265 aa10.25□□□□□ -0.77
NUP88-212ENST00000576708 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
NUP88-212ENST00000576708 METRNQ9UJH8 293 aa10.25□□□□□ -0.77
NUP88-212ENST00000576708 AKNAQ7Z591 1439 aa10.24□□□□□ -0.77
NUP88-212ENST00000576708 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
NUP88-212ENST00000576708 ARID4BQ4LE39 1312 aaPredicted RBP10.24□□□□□ -0.77
NUP88-212ENST00000576708 FANCAO15360 1455 aa10.23□□□□□ -0.77
NUP88-212ENST00000576708 DENND4BO75064 1496 aaPredicted RBP10.23□□□□□ -0.77
NUP88-212ENST00000576708 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
NUP88-212ENST00000576708 VSIG10Q8N0Z9 540 aa10.23□□□□□ -0.77
NUP88-212ENST00000576708 C7P10643 843 aa10.22□□□□□ -0.77
NUP88-212ENST00000576708 LCE2DQ5TA82 110 aaPredicted RBP10.22□□□□□ -0.77
NUP88-212ENST00000576708 ADAMTSL3P82987 1691 aa10.22□□□□□ -0.77
NUP88-212ENST00000576708 FMN1Q68DA7 1419 aa10.21□□□□□ -0.78
NUP88-212ENST00000576708 PTPRMP28827 1452 aa10.21□□□□□ -0.78
NUP88-212ENST00000576708 RICTORQ6R327 1708 aa10.21□□□□□ -0.78
NUP88-212ENST00000576708 HECW1Q76N89 1606 aa10.2□□□□□ -0.78
NUP88-212ENST00000576708 YEATS2Q9ULM3 1422 aa10.2□□□□□ -0.78
NUP88-212ENST00000576708 PLCH2O75038 1416 aa10.19□□□□□ -0.78
NUP88-212ENST00000576708 BCORL1Q5H9F3 1711 aa10.19□□□□□ -0.78
NUP88-212ENST00000576708 KIF14Q15058 1648 aa10.18□□□□□ -0.78
NUP88-212ENST00000576708 MADDQ8WXG6 1647 aa10.18□□□□□ -0.78
NUP88-212ENST00000576708 CFAP74Q9C0B2 1584 aa10.18□□□□□ -0.78
NUP88-212ENST00000576708 ARHGEF40Q8TER5 1519 aa10.18□□□□□ -0.78
NUP88-212ENST00000576708 SCAPERQ9BY12 1400 aa10.18□□□□□ -0.78
NUP88-212ENST00000576708 LRRIQ1Q96JM4 1722 aa10.18□□□□□ -0.78
NUP88-212ENST00000576708 SIGLEC1Q9BZZ2 1709 aa10.17□□□□□ -0.78
NUP88-212ENST00000576708 MLECQ14165 292 aa10.17□□□□□ -0.78
NUP88-212ENST00000576708 PCDH10Q9P2E7 1040 aa10.17□□□□□ -0.78
NUP88-212ENST00000576708 EFCAB2Q5VUJ9 269 aa10.16□□□□□ -0.78
NUP88-212ENST00000576708 MICALL2Q8IY33 904 aa10.16□□□□□ -0.78
NUP88-212ENST00000576708 CDK11AQ9UQ88 783 aaPredicted RBP10.16□□□□□ -0.78
NUP88-212ENST00000576708 ZMYM4Q5VZL5 1548 aa10.16□□□□□ -0.78
NUP88-212ENST00000576708 ZFYVE16Q7Z3T8 1539 aa10.16□□□□□ -0.78
NUP88-212ENST00000576708 TROQ12816 1431 aaPredicted RBP10.16□□□□□ -0.78
NUP88-212ENST00000576708 POGZQ7Z3K3 1410 aa10.16□□□□□ -0.78
NUP88-212ENST00000576708 BOLA1Q9Y3E2 137 aa10.15□□□□□ -0.78
NUP88-212ENST00000576708 RIMS1Q86UR5 1692 aaKnown RBP10.15□□□□□ -0.79
NUP88-212ENST00000576708 PCF11O94913 1555 aaKnown RBP10.14□□□□□ -0.79
NUP88-212ENST00000576708 MYO5CQ9NQX4 1742 aa10.14□□□□□ -0.79
NUP88-212ENST00000576708 G3V3G9 751 aa10.14□□□□□ -0.79
NUP88-212ENST00000576708 AFAP1Q8N556 730 aa10.14□□□□□ -0.79
NUP88-212ENST00000576708 ARHGAP5Q13017 1502 aa10.12□□□□□ -0.79
NUP88-212ENST00000576708 MAGI2Q86UL8 1455 aa10.12□□□□□ -0.79
NUP88-212ENST00000576708 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
NUP88-212ENST00000576708 CLIP1P30622 1438 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms