RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 PSEN2P49810 448 aa11.53□□□□□ -0.56
CDC27-219ENST00000576484 GPIHBP1Q8IV16 184 aa11.53□□□□□ -0.56
CDC27-219ENST00000576484 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
CDC27-219ENST00000576484 EPAS1Q99814 870 aa11.53□□□□□ -0.56
CDC27-219ENST00000576484 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.57
CDC27-219ENST00000576484 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.57
CDC27-219ENST00000576484 KRTAP3-3Q9BYR6 98 aa11.52□□□□□ -0.57
CDC27-219ENST00000576484 KRTAP3-2Q9BYR7 98 aa11.52□□□□□ -0.57
CDC27-219ENST00000576484 ARHGAP33O14559 1287 aa11.51□□□□□ -0.57
CDC27-219ENST00000576484 EN1Q05925 392 aaPredicted RBP11.51□□□□□ -0.57
CDC27-219ENST00000576484 KCNH8Q96L42 1107 aa11.51□□□□□ -0.57
CDC27-219ENST00000576484 GPR37O15354 613 aa11.5□□□□□ -0.57
CDC27-219ENST00000576484 PBX2P40425 430 aa11.5□□□□□ -0.57
CDC27-219ENST00000576484 FBXW7Q969H0 707 aa11.5□□□□□ -0.57
CDC27-219ENST00000576484 MAP3K7O43318 606 aa11.49□□□□□ -0.57
CDC27-219ENST00000576484 BCL2L12Q9HB09 334 aa11.49□□□□□ -0.57
CDC27-219ENST00000576484 NUTM2FA1L443 756 aa11.48□□□□□ -0.57
CDC27-219ENST00000576484 PTPREP23469 700 aa11.48□□□□□ -0.57
CDC27-219ENST00000576484 CDHR5Q9HBB8 845 aa11.48□□□□□ -0.57
CDC27-219ENST00000576484 TSR1Q2NL82 804 aaKnown RBP11.47□□□□□ -0.57
CDC27-219ENST00000576484 DMRTA1Q5VZB9 504 aa11.47□□□□□ -0.57
CDC27-219ENST00000576484 LSM11P83369 360 aaKnown RBP eCLIP11.46□□□□□ -0.57
CDC27-219ENST00000576484 C6orf132Q5T0Z8 1188 aa11.45□□□□□ -0.58
CDC27-219ENST00000576484 ZMYND10O75800 440 aa11.44□□□□□ -0.58
CDC27-219ENST00000576484 COL9A1P20849 921 aa11.41□□□□□ -0.58
CDC27-219ENST00000576484 PTGDRQ13258 359 aa11.41□□□□□ -0.58
CDC27-219ENST00000576484 FCHSD2O94868 740 aa11.4□□□□□ -0.58
CDC27-219ENST00000576484 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
CDC27-219ENST00000576484 NPDC1Q9NQX5 325 aaPredicted RBP11.4□□□□□ -0.58
CDC27-219ENST00000576484 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
CDC27-219ENST00000576484 PPP1R3GB7ZBB8 358 aa11.37□□□□□ -0.59
CDC27-219ENST00000576484 GNPATO15228 680 aa11.37□□□□□ -0.59
CDC27-219ENST00000576484 HIC1Q14526 733 aa11.37□□□□□ -0.59
CDC27-219ENST00000576484 ADGRD1Q6QNK2 874 aa11.37□□□□□ -0.59
CDC27-219ENST00000576484 FECHP22830 423 aa11.36□□□□□ -0.59
CDC27-219ENST00000576484 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
CDC27-219ENST00000576484 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
CDC27-219ENST00000576484 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
CDC27-219ENST00000576484 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
CDC27-219ENST00000576484 ZBED2Q9BTP6 218 aa11.35□□□□□ -0.59
CDC27-219ENST00000576484 VPS9D1Q9Y2B5 631 aa11.34□□□□□ -0.59
CDC27-219ENST00000576484 TK2O00142 265 aa11.32□□□□□ -0.6
CDC27-219ENST00000576484 MAP2K5Q13163 448 aa11.31□□□□□ -0.6
CDC27-219ENST00000576484 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
CDC27-219ENST00000576484 CERKQ8TCT0 537 aa11.31□□□□□ -0.6
CDC27-219ENST00000576484 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
CDC27-219ENST00000576484 KIAA1468Q9P260 1216 aa11.29□□□□□ -0.6
CDC27-219ENST00000576484 CCDC102AQ96A19 550 aa11.28□□□□□ -0.6
CDC27-219ENST00000576484 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
CDC27-219ENST00000576484 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
CDC27-219ENST00000576484 PRSS12P56730 875 aa11.27□□□□□ -0.61
CDC27-219ENST00000576484 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
CDC27-219ENST00000576484 MYT1LQ9UL68 1186 aa11.27□□□□□ -0.61
CDC27-219ENST00000576484 MINK1Q8N4C8 1332 aaPredicted RBP11.27□□□□□ -0.61
CDC27-219ENST00000576484 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
CDC27-219ENST00000576484 IRF6O14896 467 aa11.26□□□□□ -0.61
CDC27-219ENST00000576484 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
CDC27-219ENST00000576484 HRO43593 1189 aa11.25□□□□□ -0.61
CDC27-219ENST00000576484 TTC13Q8NBP0 860 aa11.25□□□□□ -0.61
CDC27-219ENST00000576484 AK7Q96M32 723 aa11.25□□□□□ -0.61
CDC27-219ENST00000576484 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
CDC27-219ENST00000576484 TSKSQ9UJT2 592 aa11.25□□□□□ -0.61
CDC27-219ENST00000576484 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
CDC27-219ENST00000576484 MRPL50Q8N5N7 158 aaKnown RBP11.24□□□□□ -0.61
CDC27-219ENST00000576484 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
CDC27-219ENST00000576484 RABGEF1Q9UJ41 708 aa11.24□□□□□ -0.61
CDC27-219ENST00000576484 GOLGA8CPA6NN73 597 aa11.23□□□□□ -0.61
CDC27-219ENST00000576484 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
CDC27-219ENST00000576484 NBPF3Q9H094 633 aa11.23□□□□□ -0.61
CDC27-219ENST00000576484 BHMG1C9JSJ3 638 aaPredicted RBP11.21□□□□□ -0.61
CDC27-219ENST00000576484 SMAPO00193 183 aa11.21□□□□□ -0.61
CDC27-219ENST00000576484 TRIM66O15016 1216 aa11.21□□□□□ -0.61
CDC27-219ENST00000576484 RNF166Q96A37 237 aaPredicted RBP11.2□□□□□ -0.62
CDC27-219ENST00000576484 ADGRG1Q9Y653 693 aa11.2□□□□□ -0.62
CDC27-219ENST00000576484 C3orf80F5H4A9 247 aa11.19□□□□□ -0.62
CDC27-219ENST00000576484 ONECUT3O60422 494 aaPredicted RBP11.19□□□□□ -0.62
CDC27-219ENST00000576484 KCTD12Q96CX2 325 aaKnown RBP11.18□□□□□ -0.62
CDC27-219ENST00000576484 PNMA3Q9UL41 463 aa11.18□□□□□ -0.62
CDC27-219ENST00000576484 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
CDC27-219ENST00000576484 NUDT18Q6ZVK8 323 aa11.17□□□□□ -0.62
CDC27-219ENST00000576484 PHOX2BQ99453 314 aa11.17□□□□□ -0.62
CDC27-219ENST00000576484 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
CDC27-219ENST00000576484 METTL3Q86U44 580 aaKnown RBP11.16□□□□□ -0.62
CDC27-219ENST00000576484 TATDN2Q93075 761 aa11.16□□□□□ -0.62
CDC27-219ENST00000576484 PDE4DQ08499 809 aa11.15□□□□□ -0.62
CDC27-219ENST00000576484 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
CDC27-219ENST00000576484 AMHR2Q16671 573 aa11.14□□□□□ -0.63
CDC27-219ENST00000576484 WNT2BQ93097 391 aa11.14□□□□□ -0.63
CDC27-219ENST00000576484 OATP04181 439 aa11.13□□□□□ -0.63
CDC27-219ENST00000576484 NEUROD2Q15784 382 aa11.13□□□□□ -0.63
CDC27-219ENST00000576484 FAM98CQ17RN3 349 aaKnown RBP11.12□□□□□ -0.63
CDC27-219ENST00000576484 LAPTM4BQ86VI4 370 aa11.12□□□□□ -0.63
CDC27-219ENST00000576484 NLRP7Q8WX94 980 aa11.12□□□□□ -0.63
CDC27-219ENST00000576484 ZFRQ96KR1 1074 aaKnown RBP11.12□□□□□ -0.63
CDC27-219ENST00000576484 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
CDC27-219ENST00000576484 PTPN5P54829 565 aa11.11□□□□□ -0.63
CDC27-219ENST00000576484 RBM46Q8TBY0 533 aaKnown RBP11.11□□□□□ -0.63
CDC27-219ENST00000576484 EYA1Q99502 592 aa11.11□□□□□ -0.63
CDC27-219ENST00000576484 PARP9Q8IXQ6 854 aa11.1□□□□□ -0.63
CDC27-219ENST00000576484 ANKK1Q8NFD2 765 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms