RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 NBPF1Q3BBV0 1214 aa22.67■■□□□ 1.22
ATPAF1-214ENST00000576409 CFTRP13569 1480 aa22.67■■□□□ 1.22
ATPAF1-214ENST00000576409 FRAT2O75474 233 aaPredicted RBP22.67■■□□□ 1.22
ATPAF1-214ENST00000576409 JPH4Q96JJ6 628 aa22.67■■□□□ 1.22
ATPAF1-214ENST00000576409 TAOK2Q9UL54 1235 aa22.65■■□□□ 1.22
ATPAF1-214ENST00000576409 PANK1Q8TE04 598 aa22.65■■□□□ 1.22
ATPAF1-214ENST00000576409 NCOA2Q15596 1464 aa22.64■■□□□ 1.22
ATPAF1-214ENST00000576409 FANCD2Q9BXW9 1451 aa22.63■■□□□ 1.21
ATPAF1-214ENST00000576409 PMFBP1Q8TBY8 1022 aa22.63■■□□□ 1.21
ATPAF1-214ENST00000576409 CASC1Q6TDU7 716 aa22.63■■□□□ 1.21
ATPAF1-214ENST00000576409 CCDC144AA2RUR9 1427 aa22.61■■□□□ 1.21
ATPAF1-214ENST00000576409 MSNP26038 577 aaKnown RBP22.61■■□□□ 1.21
ATPAF1-214ENST00000576409 FOXD4L5Q5VV16 416 aaPredicted RBP22.61■■□□□ 1.21
ATPAF1-214ENST00000576409 FOXD4L4Q8WXT5 416 aaPredicted RBP22.61■■□□□ 1.21
ATPAF1-214ENST00000576409 BACH2Q9BYV9 841 aa22.61■■□□□ 1.21
ATPAF1-214ENST00000576409 NOL8Q76FK4 1167 aaKnown RBP22.58■■□□□ 1.21
ATPAF1-214ENST00000576409 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
ATPAF1-214ENST00000576409 GBP4Q96PP9 640 aa22.56■■□□□ 1.2
ATPAF1-214ENST00000576409 ERCC6Q03468 1493 aa22.55■■□□□ 1.2
ATPAF1-214ENST00000576409 IPO8O15397 1037 aaKnown RBP22.55■■□□□ 1.2
ATPAF1-214ENST00000576409 CASKIN1Q8WXD9 1431 aa22.55■■□□□ 1.2
ATPAF1-214ENST00000576409 MLECQ14165 292 aa22.54■■□□□ 1.2
ATPAF1-214ENST00000576409 EFCAB2Q5VUJ9 269 aa22.54■■□□□ 1.2
ATPAF1-214ENST00000576409 BCAR3O75815 825 aa22.54■■□□□ 1.2
ATPAF1-214ENST00000576409 ERICH3Q5RHP9 1530 aa22.54■■□□□ 1.2
ATPAF1-214ENST00000576409 E9PSI1 815 aa22.53■■□□□ 1.2
ATPAF1-214ENST00000576409 FOXD4L6Q3SYB3 417 aaPredicted RBP22.53■■□□□ 1.2
ATPAF1-214ENST00000576409 FOXD4L3Q6VB84 417 aaPredicted RBP22.53■■□□□ 1.2
ATPAF1-214ENST00000576409 CARMIL2Q6F5E8 1435 aa22.52■■□□□ 1.19
ATPAF1-214ENST00000576409 C20orf194Q5TEA3 1177 aa22.51■■□□□ 1.19
ATPAF1-214ENST00000576409 HFM1A2PYH4 1435 aa22.5■■□□□ 1.19
ATPAF1-214ENST00000576409 PRKCSHP14314 528 aaPredicted RBP22.5■■□□□ 1.19
ATPAF1-214ENST00000576409 KANK1Q14678 1352 aa22.5■■□□□ 1.19
ATPAF1-214ENST00000576409 CGNL1Q0VF96 1302 aa22.5■■□□□ 1.19
ATPAF1-214ENST00000576409 NAIPQ13075 1403 aa22.49■■□□□ 1.19
ATPAF1-214ENST00000576409 ANKRD45Q5TZF3 282 aa22.49■■□□□ 1.19
ATPAF1-214ENST00000576409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.48■■□□□ 1.19
ATPAF1-214ENST00000576409 TIAM1Q13009 1591 aa22.47■■□□□ 1.19
ATPAF1-214ENST00000576409 BRD4O60885 1362 aaPredicted RBP22.47■■□□□ 1.19
ATPAF1-214ENST00000576409 CUX1P39880 1505 aa22.47■■□□□ 1.19
ATPAF1-214ENST00000576409 OS9Q13438 667 aaPredicted RBP22.46■■□□□ 1.19
ATPAF1-214ENST00000576409 VSIG10Q8N0Z9 540 aa22.45■■□□□ 1.18
ATPAF1-214ENST00000576409 SPAG9O60271 1321 aaKnown RBP22.45■■□□□ 1.18
ATPAF1-214ENST00000576409 KCNJ4P48050 445 aa22.45■■□□□ 1.18
ATPAF1-214ENST00000576409 CHMP4BQ9H444 224 aaKnown RBP22.45■■□□□ 1.18
ATPAF1-214ENST00000576409 NUTM2FA1L443 756 aa22.44■■□□□ 1.18
ATPAF1-214ENST00000576409 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
ATPAF1-214ENST00000576409 LNPKQ9C0E8 428 aa22.44■■□□□ 1.18
ATPAF1-214ENST00000576409 ANKRD50Q9ULJ7 1429 aa22.44■■□□□ 1.18
ATPAF1-214ENST00000576409 ZKSCAN2Q63HK3 967 aa22.43■■□□□ 1.18
ATPAF1-214ENST00000576409 SLC4A10Q6U841 1118 aa22.43■■□□□ 1.18
ATPAF1-214ENST00000576409 SMG6Q86US8 1419 aaKnown RBP22.43■■□□□ 1.18
ATPAF1-214ENST00000576409 CALD1Q05682 793 aaKnown RBP22.42■■□□□ 1.18
ATPAF1-214ENST00000576409 LMOD2Q6P5Q4 547 aa22.42■■□□□ 1.18
ATPAF1-214ENST00000576409 DDX49Q9Y6V7 483 aaKnown RBP22.42■■□□□ 1.18
ATPAF1-214ENST00000576409 HSP90AA2PQ14568 343 aaPredicted RBP22.42■■□□□ 1.18
ATPAF1-214ENST00000576409 PPP2R1AP30153 589 aa22.41■■□□□ 1.18
ATPAF1-214ENST00000576409 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.18
ATPAF1-214ENST00000576409 RSPH6AQ9H0K4 717 aa22.39■■□□□ 1.18
ATPAF1-214ENST00000576409 TOP2BQ02880 1626 aa22.39■■□□□ 1.17
ATPAF1-214ENST00000576409 NAP1L2Q9ULW6 460 aaPredicted RBP22.38■■□□□ 1.17
ATPAF1-214ENST00000576409 HDGFL2Q7Z4V5 671 aaPredicted RBP22.38■■□□□ 1.17
ATPAF1-214ENST00000576409 DZIP1LQ8IYY4 767 aaKnown RBP22.36■■□□□ 1.17
ATPAF1-214ENST00000576409 A0A0G2JS52 829 aa22.36■■□□□ 1.17
ATPAF1-214ENST00000576409 TMEM132EQ6IEE7 984 aa22.35■■□□□ 1.17
ATPAF1-214ENST00000576409 FYCO1Q9BQS8 1478 aa22.35■■□□□ 1.17
ATPAF1-214ENST00000576409 AMER1Q5JTC6 1135 aaPredicted RBP22.35■■□□□ 1.17
ATPAF1-214ENST00000576409 RSPH4AQ5TD94 716 aa22.35■■□□□ 1.17
ATPAF1-214ENST00000576409 C22orf23Q9BZE7 217 aa22.35■■□□□ 1.17
ATPAF1-214ENST00000576409 TRIM6-TRIM34B2RNG4 842 aa22.35■■□□□ 1.17
ATPAF1-214ENST00000576409 TCP11L2Q8N4U5 519 aa22.35■■□□□ 1.17
ATPAF1-214ENST00000576409 FGD1P98174 961 aa22.34■■□□□ 1.17
ATPAF1-214ENST00000576409 CFAP70Q5T0N1 1121 aa22.34■■□□□ 1.17
ATPAF1-214ENST00000576409 MAPKBP1O60336 1514 aa22.34■■□□□ 1.17
ATPAF1-214ENST00000576409 EIF3AQ14152 1382 aaKnown RBP22.33■■□□□ 1.17
ATPAF1-214ENST00000576409 NCAPD3P42695 1498 aa22.33■■□□□ 1.16
ATPAF1-214ENST00000576409 GOLGA6L4A6NEF3 574 aa22.32■■□□□ 1.16
ATPAF1-214ENST00000576409 CHMP5Q9NZZ3 219 aa22.32■■□□□ 1.16
ATPAF1-214ENST00000576409 PDZRN3Q9UPQ7 1066 aa22.32■■□□□ 1.16
ATPAF1-214ENST00000576409 MTHFSP49914 203 aa22.31■■□□□ 1.16
ATPAF1-214ENST00000576409 MINK1Q8N4C8 1332 aaPredicted RBP22.3■■□□□ 1.16
ATPAF1-214ENST00000576409 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
ATPAF1-214ENST00000576409 DDX11L8A8MPP1 907 aa22.29■■□□□ 1.16
ATPAF1-214ENST00000576409 RIPK4P57078 832 aa22.29■■□□□ 1.16
ATPAF1-214ENST00000576409 ZRSR1Q15695 479 aaKnown RBP22.29■■□□□ 1.16
ATPAF1-214ENST00000576409 RTF1Q92541 710 aaKnown RBP22.28■■□□□ 1.16
ATPAF1-214ENST00000576409 TSR2Q969E8 191 aaKnown RBP22.28■■□□□ 1.16
ATPAF1-214ENST00000576409 NESP48681 1621 aa22.28■■□□□ 1.16
ATPAF1-214ENST00000576409 MCCP23508 829 aa22.28■■□□□ 1.16
ATPAF1-214ENST00000576409 DRC7Q8IY82 874 aa22.28■■□□□ 1.16
ATPAF1-214ENST00000576409 WASHC2CQ9Y4E1 1318 aa22.28■■□□□ 1.16
ATPAF1-214ENST00000576409 TERF2IPQ9NYB0 399 aa22.27■■□□□ 1.16
ATPAF1-214ENST00000576409 PRG4Q92954 1404 aaPredicted RBP22.26■■□□□ 1.15
ATPAF1-214ENST00000576409 RUNDC1Q96C34 613 aa22.26■■□□□ 1.15
ATPAF1-214ENST00000576409 SLC12A5Q9H2X9 1139 aa22.26■■□□□ 1.15
ATPAF1-214ENST00000576409 AFAP1Q8N556 730 aa22.26■■□□□ 1.15
ATPAF1-214ENST00000576409 TRAK2O60296 914 aa22.25■■□□□ 1.15
ATPAF1-214ENST00000576409 PTPRKQ15262 1439 aa22.25■■□□□ 1.15
ATPAF1-214ENST00000576409 ANKRD30BQ9BXX2 1392 aa22.25■■□□□ 1.15
ATPAF1-214ENST00000576409 HMOX1P09601 288 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms