RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 STRCP1A6NGW2 1772 aa12.31□□□□□ -0.44
RAB40B-210ENST00000576148 A2MP01023 1474 aa12.3□□□□□ -0.44
RAB40B-210ENST00000576148 IQGAP1P46940 1657 aa12.29□□□□□ -0.44
RAB40B-210ENST00000576148 UGGT1Q9NYU2 1555 aa12.29□□□□□ -0.44
RAB40B-210ENST00000576148 CDK12Q9NYV4 1490 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-210ENST00000576148 SAMD9LQ8IVG5 1584 aa12.28□□□□□ -0.44
RAB40B-210ENST00000576148 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-210ENST00000576148 NLRP1Q9C000 1473 aa12.27□□□□□ -0.44
RAB40B-210ENST00000576148 ITSN2Q9NZM3 1697 aa12.27□□□□□ -0.45
RAB40B-210ENST00000576148 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
RAB40B-210ENST00000576148 SPATA31A6Q5VVP1 1343 aa12.27□□□□□ -0.45
RAB40B-210ENST00000576148 MIA2Q96PC5 1412 aa12.27□□□□□ -0.45
RAB40B-210ENST00000576148 HNRNPMP52272 730 aaKnown RBP eCLIP12.26□□□□□ -0.45
RAB40B-210ENST00000576148 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
RAB40B-210ENST00000576148 KDM5DQ9BY66 1539 aa12.26□□□□□ -0.45
RAB40B-210ENST00000576148 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
RAB40B-210ENST00000576148 NUTM2BA6NNL0 878 aaPredicted RBP12.25□□□□□ -0.45
RAB40B-210ENST00000576148 NUTM2EB1AL46 878 aaPredicted RBP12.25□□□□□ -0.45
RAB40B-210ENST00000576148 NUTM2DQ5VT03 806 aaPredicted RBP12.25□□□□□ -0.45
RAB40B-210ENST00000576148 NUTM2AQ8IVF1 878 aaPredicted RBP12.25□□□□□ -0.45
RAB40B-210ENST00000576148 PLXNC1O60486 1568 aa12.25□□□□□ -0.45
RAB40B-210ENST00000576148 ROBO1Q9Y6N7 1651 aa12.25□□□□□ -0.45
RAB40B-210ENST00000576148 PZPP20742 1482 aa12.24□□□□□ -0.45
RAB40B-210ENST00000576148 TMEM94Q12767 1356 aa12.23□□□□□ -0.45
RAB40B-210ENST00000576148 ATP7AQ04656 1500 aa12.22□□□□□ -0.45
RAB40B-210ENST00000576148 LRRC9Q6ZRR7 1453 aa12.22□□□□□ -0.45
RAB40B-210ENST00000576148 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
RAB40B-210ENST00000576148 LRP6O75581 1613 aa12.22□□□□□ -0.45
RAB40B-210ENST00000576148 PREX2Q70Z35 1606 aa12.22□□□□□ -0.45
RAB40B-210ENST00000576148 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
RAB40B-210ENST00000576148 SLAIN2Q9P270 581 aa12.21□□□□□ -0.45
RAB40B-210ENST00000576148 FMN1Q68DA7 1419 aa12.2□□□□□ -0.46
RAB40B-210ENST00000576148 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
RAB40B-210ENST00000576148 RBM6P78332 1123 aaKnown RBP12.19□□□□□ -0.46
RAB40B-210ENST00000576148 TXNDC2Q86VQ3 553 aa12.19□□□□□ -0.46
RAB40B-210ENST00000576148 FGD6Q6ZV73 1430 aa12.19□□□□□ -0.46
RAB40B-210ENST00000576148 PHLPP1O60346 1717 aa12.18□□□□□ -0.46
RAB40B-210ENST00000576148 KIF3BO15066 747 aa12.18□□□□□ -0.46
RAB40B-210ENST00000576148 XIRP1Q702N8 1843 aaKnown RBP12.18□□□□□ -0.46
RAB40B-210ENST00000576148 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
RAB40B-210ENST00000576148 SYCP2Q9BX26 1530 aa12.17□□□□□ -0.46
RAB40B-210ENST00000576148 AFF2P51816 1311 aa12.17□□□□□ -0.46
RAB40B-210ENST00000576148 SCAF11Q99590 1463 aaKnown RBP12.17□□□□□ -0.46
RAB40B-210ENST00000576148 LTKP29376 864 aa12.17□□□□□ -0.46
RAB40B-210ENST00000576148 RGS12O14924 1447 aa12.17□□□□□ -0.46
RAB40B-210ENST00000576148 KCNA6P17658 529 aa12.16□□□□□ -0.46
RAB40B-210ENST00000576148 IFFO2Q5TF58 517 aa12.16□□□□□ -0.46
RAB40B-210ENST00000576148 CHIC1Q5VXU3 224 aa12.16□□□□□ -0.46
RAB40B-210ENST00000576148 QTRT2Q9H974 415 aaKnown RBP12.16□□□□□ -0.46
RAB40B-210ENST00000576148 EID1Q9Y6B2 187 aa12.16□□□□□ -0.46
RAB40B-210ENST00000576148 MSH6P52701 1360 aa12.16□□□□□ -0.46
RAB40B-210ENST00000576148 ZC3H13Q5T200 1668 aaKnown RBP12.16□□□□□ -0.46
RAB40B-210ENST00000576148 KIAA1107Q9UPP5 1409 aa12.15□□□□□ -0.46
RAB40B-210ENST00000576148 DHX29Q7Z478 1369 aaKnown RBP12.15□□□□□ -0.46
RAB40B-210ENST00000576148 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
RAB40B-210ENST00000576148 NGLY1Q96IV0 654 aa12.14□□□□□ -0.47
RAB40B-210ENST00000576148 CCDC125Q86Z20 511 aa12.13□□□□□ -0.47
RAB40B-210ENST00000576148 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
RAB40B-210ENST00000576148 PLEKHH2Q8IVE3 1493 aa12.13□□□□□ -0.47
RAB40B-210ENST00000576148 COL16A1Q07092 1604 aaPredicted RBP12.11□□□□□ -0.47
RAB40B-210ENST00000576148 ADGBQ8N7X0 1667 aa12.11□□□□□ -0.47
RAB40B-210ENST00000576148 MAP3K1Q13233 1512 aa12.11□□□□□ -0.47
RAB40B-210ENST00000576148 CDC42BPAQ5VT25 1732 aa12.09□□□□□ -0.47
RAB40B-210ENST00000576148 GPATCH8Q9UKJ3 1502 aaKnown RBP12.09□□□□□ -0.47
RAB40B-210ENST00000576148 C8orf37Q96NL8 207 aa12.08□□□□□ -0.48
RAB40B-210ENST00000576148 PRDM15P57071 1507 aaPredicted RBP12.07□□□□□ -0.48
RAB40B-210ENST00000576148 RTEL1-TNFRSF6BF6WH68 1400 aa12.07□□□□□ -0.48
RAB40B-210ENST00000576148 SLC26A8Q96RN1 970 aa12.07□□□□□ -0.48
RAB40B-210ENST00000576148 ARHGAP23Q9P227 1491 aa12.07□□□□□ -0.48
RAB40B-210ENST00000576148 YY1P25490 414 aa12.06□□□□□ -0.48
RAB40B-210ENST00000576148 NCOA2Q15596 1464 aa12.06□□□□□ -0.48
RAB40B-210ENST00000576148 SLIT1O75093 1534 aa12.06□□□□□ -0.48
RAB40B-210ENST00000576148 SHPRHQ149N8 1683 aa12.05□□□□□ -0.48
RAB40B-210ENST00000576148 ABCC3O15438 1527 aa12.05□□□□□ -0.48
RAB40B-210ENST00000576148 TIAM1Q13009 1591 aa12.04□□□□□ -0.48
RAB40B-210ENST00000576148 NKTRP30414 1462 aaKnown RBP12.03□□□□□ -0.48
RAB40B-210ENST00000576148 ERVK-7P63135 1459 aa12.03□□□□□ -0.48
RAB40B-210ENST00000576148 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
RAB40B-210ENST00000576148 C14orf37Q86TY3 774 aa12.03□□□□□ -0.48
RAB40B-210ENST00000576148 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
RAB40B-210ENST00000576148 CADPS2Q86UW7 1296 aa12.02□□□□□ -0.49
RAB40B-210ENST00000576148 UBR1Q8IWV7 1749 aa12.02□□□□□ -0.49
RAB40B-210ENST00000576148 CCNB3Q8WWL7 1395 aa12.02□□□□□ -0.49
RAB40B-210ENST00000576148 TMEM2Q9UHN6 1383 aa12.02□□□□□ -0.49
RAB40B-210ENST00000576148 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.49
RAB40B-210ENST00000576148 LRP5O75197 1615 aa12.01□□□□□ -0.49
RAB40B-210ENST00000576148 BCANQ96GW7 911 aa12.01□□□□□ -0.49
RAB40B-210ENST00000576148 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
RAB40B-210ENST00000576148 AHDC1Q5TGY3 1603 aaPredicted RBP12□□□□□ -0.49
RAB40B-210ENST00000576148 UBTFP17480 764 aaKnown RBP12□□□□□ -0.49
RAB40B-210ENST00000576148 ATF3P18847 181 aa12□□□□□ -0.49
RAB40B-210ENST00000576148 TRPC5Q9UL62 973 aaPredicted RBP12□□□□□ -0.49
RAB40B-210ENST00000576148 LRRC59Q96AG4 307 aaKnown RBP11.99□□□□□ -0.49
RAB40B-210ENST00000576148 EEA1Q15075 1411 aa11.99□□□□□ -0.49
RAB40B-210ENST00000576148 LRRIQ1Q96JM4 1722 aa11.99□□□□□ -0.49
RAB40B-210ENST00000576148 NWD1Q149M9 1564 aa11.98□□□□□ -0.49
RAB40B-210ENST00000576148 MBD5Q9P267 1494 aa11.98□□□□□ -0.49
RAB40B-210ENST00000576148 USP21Q9UK80 565 aa11.98□□□□□ -0.49
RAB40B-210ENST00000576148 ADAMTS2O95450 1211 aa11.97□□□□□ -0.49
RAB40B-210ENST00000576148 BRINP3Q76B58 766 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms