RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 SMYD5Q6GMV2 418 aa8.26□□□□□ -1.09
CDC27-218ENST00000575830 BCANQ96GW7 911 aa8.25□□□□□ -1.09
CDC27-218ENST00000575830 SLC4A5Q9BY07 1137 aa8.25□□□□□ -1.09
CDC27-218ENST00000575830 NPDC1Q9NQX5 325 aaPredicted RBP8.25□□□□□ -1.09
CDC27-218ENST00000575830 CDAN1Q8IWY9 1227 aa8.24□□□□□ -1.09
CDC27-218ENST00000575830 GPR37O15354 613 aa8.23□□□□□ -1.09
CDC27-218ENST00000575830 COL9A1P20849 921 aa8.22□□□□□ -1.09
CDC27-218ENST00000575830 PTPREP23469 700 aa8.22□□□□□ -1.09
CDC27-218ENST00000575830 TSR1Q2NL82 804 aaKnown RBP8.22□□□□□ -1.09
CDC27-218ENST00000575830 PPP1R3GB7ZBB8 358 aa8.21□□□□□ -1.1
CDC27-218ENST00000575830 PSEN2P49810 448 aa8.21□□□□□ -1.1
CDC27-218ENST00000575830 RBM26Q5T8P6 1007 aaKnown RBP8.21□□□□□ -1.1
CDC27-218ENST00000575830 TTC13Q8NBP0 860 aa8.21□□□□□ -1.1
CDC27-218ENST00000575830 ZBED2Q9BTP6 218 aa8.21□□□□□ -1.1
CDC27-218ENST00000575830 TK2O00142 265 aa8.2□□□□□ -1.1
CDC27-218ENST00000575830 MAP3K7O43318 606 aa8.2□□□□□ -1.1
CDC27-218ENST00000575830 ONECUT3O60422 494 aaPredicted RBP8.2□□□□□ -1.1
CDC27-218ENST00000575830 PTGDRQ13258 359 aa8.2□□□□□ -1.1
CDC27-218ENST00000575830 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
CDC27-218ENST00000575830 CERKQ8TCT0 537 aa8.2□□□□□ -1.1
CDC27-218ENST00000575830 RBM33Q96EV2 1170 aaKnown RBP8.2□□□□□ -1.1
CDC27-218ENST00000575830 AXIN2Q9Y2T1 843 aa8.2□□□□□ -1.1
CDC27-218ENST00000575830 LSM11P83369 360 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDC27-218ENST00000575830 CDHR5Q9HBB8 845 aa8.19□□□□□ -1.1
CDC27-218ENST00000575830 KCNK17Q96T54 332 aa8.18□□□□□ -1.1
CDC27-218ENST00000575830 RBM27Q9P2N5 1060 aaKnown RBP8.18□□□□□ -1.1
CDC27-218ENST00000575830 BHMG1C9JSJ3 638 aaPredicted RBP8.16□□□□□ -1.1
CDC27-218ENST00000575830 HRO43593 1189 aa8.16□□□□□ -1.1
CDC27-218ENST00000575830 LMOD2Q6P5Q4 547 aa8.16□□□□□ -1.1
CDC27-218ENST00000575830 VPS9D1Q9Y2B5 631 aa8.16□□□□□ -1.1
CDC27-218ENST00000575830 TULP1O00294 542 aaPredicted RBP8.15□□□□□ -1.1
CDC27-218ENST00000575830 FCHSD2O94868 740 aa8.14□□□□□ -1.11
CDC27-218ENST00000575830 PRSS12P56730 875 aa8.14□□□□□ -1.11
CDC27-218ENST00000575830 FAM198AQ9UFP1 575 aa8.14□□□□□ -1.11
CDC27-218ENST00000575830 TRIM6-TRIM34B2RNG4 842 aa8.13□□□□□ -1.11
CDC27-218ENST00000575830 HIC1Q14526 733 aa8.12□□□□□ -1.11
CDC27-218ENST00000575830 ADGRD1Q6QNK2 874 aa8.12□□□□□ -1.11
CDC27-218ENST00000575830 GPIHBP1Q8IV16 184 aa8.12□□□□□ -1.11
CDC27-218ENST00000575830 CDCA7LQ96GN5 454 aa8.12□□□□□ -1.11
CDC27-218ENST00000575830 KCNH8Q96L42 1107 aa8.12□□□□□ -1.11
CDC27-218ENST00000575830 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
CDC27-218ENST00000575830 NUTM2FA1L443 756 aa8.11□□□□□ -1.11
CDC27-218ENST00000575830 PROX2Q3B8N5 592 aa8.11□□□□□ -1.11
CDC27-218ENST00000575830 RABGEF1Q9UJ41 708 aa8.11□□□□□ -1.11
CDC27-218ENST00000575830 GNPATO15228 680 aa8.1□□□□□ -1.11
CDC27-218ENST00000575830 ZMYND10O75800 440 aa8.1□□□□□ -1.11
CDC27-218ENST00000575830 ZC3H15Q8WU90 426 aaKnown RBP8.1□□□□□ -1.11
CDC27-218ENST00000575830 C3orf80F5H4A9 247 aa8.09□□□□□ -1.11
CDC27-218ENST00000575830 FECHP22830 423 aa8.08□□□□□ -1.12
CDC27-218ENST00000575830 BARGINQ6ZT62 677 aa8.08□□□□□ -1.12
CDC27-218ENST00000575830 SPNS2Q8IVW8 549 aa8.08□□□□□ -1.12
CDC27-218ENST00000575830 PADI6Q6TGC4 694 aa8.07□□□□□ -1.12
CDC27-218ENST00000575830 ANKRD13DQ6ZTN6 518 aa8.07□□□□□ -1.12
CDC27-218ENST00000575830 EYA1Q99502 592 aa8.07□□□□□ -1.12
CDC27-218ENST00000575830 KIAA1468Q9P260 1216 aa8.07□□□□□ -1.12
CDC27-218ENST00000575830 LAPTM4BQ86VI4 370 aa8.06□□□□□ -1.12
CDC27-218ENST00000575830 PACS2Q86VP3 889 aa8.05□□□□□ -1.12
CDC27-218ENST00000575830 ADGRG1Q9Y653 693 aa8.05□□□□□ -1.12
CDC27-218ENST00000575830 MINK1Q8N4C8 1332 aaPredicted RBP8.03□□□□□ -1.12
CDC27-218ENST00000575830 MAP2K5Q13163 448 aa8.03□□□□□ -1.12
CDC27-218ENST00000575830 TATDN2Q93075 761 aa8.03□□□□□ -1.12
CDC27-218ENST00000575830 IRF6O14896 467 aa8.02□□□□□ -1.13
CDC27-218ENST00000575830 NBPF26B4DH59 902 aa8.01□□□□□ -1.13
CDC27-218ENST00000575830 PXYLP1Q8TE99 480 aa8.01□□□□□ -1.13
CDC27-218ENST00000575830 NBPF3Q9H094 633 aa8.01□□□□□ -1.13
CDC27-218ENST00000575830 FAM98CQ17RN3 349 aaKnown RBP8□□□□□ -1.13
CDC27-218ENST00000575830 NUDT18Q6ZVK8 323 aa8□□□□□ -1.13
CDC27-218ENST00000575830 OATP04181 439 aa7.99□□□□□ -1.13
CDC27-218ENST00000575830 METTL3Q86U44 580 aaKnown RBP7.99□□□□□ -1.13
CDC27-218ENST00000575830 MRPL50Q8N5N7 158 aaKnown RBP7.98□□□□□ -1.13
CDC27-218ENST00000575830 PHOX2BQ99453 314 aa7.98□□□□□ -1.13
CDC27-218ENST00000575830 PNMA3Q9UL41 463 aa7.98□□□□□ -1.13
CDC27-218ENST00000575830 MMRN1Q13201 1228 aa7.97□□□□□ -1.13
CDC27-218ENST00000575830 FAM161AQ3B820 660 aa7.97□□□□□ -1.13
CDC27-218ENST00000575830 RBM46Q8TBY0 533 aaKnown RBP7.97□□□□□ -1.13
CDC27-218ENST00000575830 TMUB1Q9BVT8 246 aa7.97□□□□□ -1.13
CDC27-218ENST00000575830 SMAPO00193 183 aa7.96□□□□□ -1.14
CDC27-218ENST00000575830 ZFRQ96KR1 1074 aaKnown RBP7.96□□□□□ -1.14
CDC27-218ENST00000575830 SEPT9Q9UHD8 586 aaPredicted RBP7.96□□□□□ -1.14
CDC27-218ENST00000575830 MYT1LQ9UL68 1186 aa7.96□□□□□ -1.14
CDC27-218ENST00000575830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.95□□□□□ -1.14
CDC27-218ENST00000575830 CCDC102AQ96A19 550 aa7.95□□□□□ -1.14
CDC27-218ENST00000575830 RCCD1A6NED2 376 aa7.94□□□□□ -1.14
CDC27-218ENST00000575830 TMEM134Q9H6X4 195 aa7.94□□□□□ -1.14
CDC27-218ENST00000575830 SOWAHBA6NEL2 793 aa7.93□□□□□ -1.14
CDC27-218ENST00000575830 DNAJB2P25686 324 aa7.93□□□□□ -1.14
CDC27-218ENST00000575830 AMHR2Q16671 573 aa7.93□□□□□ -1.14
CDC27-218ENST00000575830 AK7Q96M32 723 aa7.93□□□□□ -1.14
CDC27-218ENST00000575830 TRIM66O15016 1216 aa7.91□□□□□ -1.14
CDC27-218ENST00000575830 THSD4Q6ZMP0 1018 aa7.91□□□□□ -1.14
CDC27-218ENST00000575830 SAMD7Q7Z3H4 446 aa7.9□□□□□ -1.14
CDC27-218ENST00000575830 KRI1Q8N9T8 703 aaKnown RBP7.9□□□□□ -1.14
CDC27-218ENST00000575830 WNT2BQ93097 391 aa7.9□□□□□ -1.14
CDC27-218ENST00000575830 RNF166Q96A37 237 aaPredicted RBP7.9□□□□□ -1.14
CDC27-218ENST00000575830 STAC3Q96MF2 364 aa7.9□□□□□ -1.14
CDC27-218ENST00000575830 SLC24A3Q9HC58 644 aa7.9□□□□□ -1.14
CDC27-218ENST00000575830 TPRNQ4KMQ1 711 aa7.89□□□□□ -1.15
CDC27-218ENST00000575830 ANKK1Q8NFD2 765 aa7.89□□□□□ -1.15
CDC27-218ENST00000575830 DAXXQ9UER7 740 aaPredicted RBP7.89□□□□□ -1.15
CDC27-218ENST00000575830 SWT1Q5T5J6 900 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms