RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-206ENST00000575320 NUTM2FA1L443 756 aa17.36■□□□□ 0.37
TFAP4-206ENST00000575320 RSPH6AQ9H0K4 717 aa17.36■□□□□ 0.37
TFAP4-206ENST00000575320 JPH4Q96JJ6 628 aa17.36■□□□□ 0.37
TFAP4-206ENST00000575320 PHF14O94880 888 aa17.36■□□□□ 0.37
TFAP4-206ENST00000575320 LTV1Q96GA3 475 aaPredicted RBP17.35■□□□□ 0.37
TFAP4-206ENST00000575320 SMC4Q9NTJ3 1288 aa17.35■□□□□ 0.37
TFAP4-206ENST00000575320 ROCK2O75116 1388 aaKnown RBP17.35■□□□□ 0.37
TFAP4-206ENST00000575320 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
TFAP4-206ENST00000575320 FOXD4L5Q5VV16 416 aaPredicted RBP17.34■□□□□ 0.37
TFAP4-206ENST00000575320 FOXD4L4Q8WXT5 416 aaPredicted RBP17.34■□□□□ 0.37
TFAP4-206ENST00000575320 GPATCH3Q96I76 525 aa17.34■□□□□ 0.37
TFAP4-206ENST00000575320 CREBRFQ8IUR6 639 aa17.33■□□□□ 0.37
TFAP4-206ENST00000575320 DDX11L8A8MPP1 907 aa17.33■□□□□ 0.36
TFAP4-206ENST00000575320 PKD2Q13563 968 aa17.33■□□□□ 0.36
TFAP4-206ENST00000575320 TERF2IPQ9NYB0 399 aa17.33■□□□□ 0.36
TFAP4-206ENST00000575320 PDE4CQ08493 712 aa17.32■□□□□ 0.36
TFAP4-206ENST00000575320 CCDC34Q96HJ3 373 aa17.32■□□□□ 0.36
TFAP4-206ENST00000575320 ANKRD30AQ9BXX3 1397 aa17.32■□□□□ 0.36
TFAP4-206ENST00000575320 ARHGAP35Q9NRY4 1499 aa17.31■□□□□ 0.36
TFAP4-206ENST00000575320 CLUAP1Q96AJ1 413 aa17.31■□□□□ 0.36
TFAP4-206ENST00000575320 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
TFAP4-206ENST00000575320 HNRNPMP52272 730 aaKnown RBP eCLIP17.3■□□□□ 0.36
TFAP4-206ENST00000575320 CCDC146Q8IYE0 955 aa17.3■□□□□ 0.36
TFAP4-206ENST00000575320 ST18O60284 1047 aa17.3■□□□□ 0.36
TFAP4-206ENST00000575320 TRIM34Q9BYJ4 488 aa17.3■□□□□ 0.36
TFAP4-206ENST00000575320 USP35Q9P2H5 1018 aa17.3■□□□□ 0.36
TFAP4-206ENST00000575320 CTDP1Q9Y5B0 961 aaPredicted RBP17.3■□□□□ 0.36
TFAP4-206ENST00000575320 HMMRO75330 724 aa17.29■□□□□ 0.36
TFAP4-206ENST00000575320 CADPSQ9ULU8 1353 aa17.29■□□□□ 0.36
TFAP4-206ENST00000575320 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
TFAP4-206ENST00000575320 RSPH4AQ5TD94 716 aa17.29■□□□□ 0.36
TFAP4-206ENST00000575320 STK31Q9BXU1 1019 aa17.29■□□□□ 0.36
TFAP4-206ENST00000575320 PTPRGP23470 1445 aa17.29■□□□□ 0.36
TFAP4-206ENST00000575320 TPM3P06753 285 aa17.28■□□□□ 0.36
TFAP4-206ENST00000575320 CENPJQ9HC77 1338 aaPredicted RBP17.28■□□□□ 0.36
TFAP4-206ENST00000575320 RASSF8Q8NHQ8 419 aa17.28■□□□□ 0.36
TFAP4-206ENST00000575320 GSE1Q14687 1217 aa17.28■□□□□ 0.36
TFAP4-206ENST00000575320 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
TFAP4-206ENST00000575320 PSME1Q06323 249 aa17.27■□□□□ 0.36
TFAP4-206ENST00000575320 PRM3Q9NNZ6 103 aa17.27■□□□□ 0.35
TFAP4-206ENST00000575320 SLC4A3P48751 1232 aa17.27■□□□□ 0.35
TFAP4-206ENST00000575320 SETQ01105 290 aaPredicted RBP17.27■□□□□ 0.35
TFAP4-206ENST00000575320 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
TFAP4-206ENST00000575320 KIF16BQ96L93 1317 aa17.26■□□□□ 0.35
TFAP4-206ENST00000575320 SLC4A10Q6U841 1118 aa17.26■□□□□ 0.35
TFAP4-206ENST00000575320 PPP1R1BQ9UD71 204 aaPredicted RBP17.25■□□□□ 0.35
TFAP4-206ENST00000575320 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
TFAP4-206ENST00000575320 RAB3GAP2Q9H2M9 1393 aa17.24■□□□□ 0.35
TFAP4-206ENST00000575320 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
TFAP4-206ENST00000575320 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.24■□□□□ 0.35
TFAP4-206ENST00000575320 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
TFAP4-206ENST00000575320 DDX49Q9Y6V7 483 aaKnown RBP17.24■□□□□ 0.35
TFAP4-206ENST00000575320 NUP155O75694 1391 aa17.23■□□□□ 0.35
TFAP4-206ENST00000575320 PDE3BQ13370 1112 aa17.23■□□□□ 0.35
TFAP4-206ENST00000575320 FMN1Q68DA7 1419 aa17.23■□□□□ 0.35
TFAP4-206ENST00000575320 SF3A1Q15459 793 aaKnown RBP17.23■□□□□ 0.35
TFAP4-206ENST00000575320 PIP4K2BP78356 416 aa17.23■□□□□ 0.35
TFAP4-206ENST00000575320 PDE4AP27815 886 aa17.23■□□□□ 0.35
TFAP4-206ENST00000575320 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
TFAP4-206ENST00000575320 SKOR2Q2VWA4 1001 aaPredicted RBP17.21■□□□□ 0.35
TFAP4-206ENST00000575320 NOL10Q9BSC4 688 aaKnown RBP17.21■□□□□ 0.35
TFAP4-206ENST00000575320 ZNF771Q7L3S4 317 aaPredicted RBP17.21■□□□□ 0.35
TFAP4-206ENST00000575320 CCAR2Q8N163 923 aaKnown RBP17.21■□□□□ 0.35
TFAP4-206ENST00000575320 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
TFAP4-206ENST00000575320 CENPQQ7L2Z9 268 aaPredicted RBP17.2■□□□□ 0.34
TFAP4-206ENST00000575320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
TFAP4-206ENST00000575320 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
TFAP4-206ENST00000575320 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
TFAP4-206ENST00000575320 H3BQV1 296 aa17.19■□□□□ 0.34
TFAP4-206ENST00000575320 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
TFAP4-206ENST00000575320 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
TFAP4-206ENST00000575320 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
TFAP4-206ENST00000575320 PES1O00541 588 aaKnown RBP17.18■□□□□ 0.34
TFAP4-206ENST00000575320 FOXD4L6Q3SYB3 417 aaPredicted RBP17.18■□□□□ 0.34
TFAP4-206ENST00000575320 FOXD4L3Q6VB84 417 aaPredicted RBP17.18■□□□□ 0.34
TFAP4-206ENST00000575320 CEP89Q96ST8 783 aa17.18■□□□□ 0.34
TFAP4-206ENST00000575320 KIF3AQ9Y496 699 aa17.18■□□□□ 0.34
TFAP4-206ENST00000575320 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
TFAP4-206ENST00000575320 TPD52L1Q16890 204 aaPredicted RBP17.18■□□□□ 0.34
TFAP4-206ENST00000575320 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
TFAP4-206ENST00000575320 CCDC18Q5T9S5 1454 aa17.17■□□□□ 0.34
TFAP4-206ENST00000575320 NUTM2BA6NNL0 878 aaPredicted RBP17.17■□□□□ 0.34
TFAP4-206ENST00000575320 NUTM2EB1AL46 878 aaPredicted RBP17.17■□□□□ 0.34
TFAP4-206ENST00000575320 NUTM2AQ8IVF1 878 aaPredicted RBP17.17■□□□□ 0.34
TFAP4-206ENST00000575320 ZNF592Q92610 1267 aa17.16■□□□□ 0.34
TFAP4-206ENST00000575320 TOMM22Q9NS69 142 aa17.16■□□□□ 0.34
TFAP4-206ENST00000575320 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
TFAP4-206ENST00000575320 BECN2A8MW95 431 aa17.15■□□□□ 0.34
TFAP4-206ENST00000575320 GPS2Q13227 327 aa17.15■□□□□ 0.34
TFAP4-206ENST00000575320 PLIN1O60240 522 aa17.15■□□□□ 0.34
TFAP4-206ENST00000575320 TSR1Q2NL82 804 aaKnown RBP17.15■□□□□ 0.34
TFAP4-206ENST00000575320 AMOTL1Q8IY63 956 aa17.15■□□□□ 0.34
TFAP4-206ENST00000575320 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
TFAP4-206ENST00000575320 VGFO15240 615 aaPredicted RBP17.14■□□□□ 0.33
TFAP4-206ENST00000575320 ANKRD45Q5TZF3 282 aa17.14■□□□□ 0.33
TFAP4-206ENST00000575320 UACAQ9BZF9 1416 aa17.14■□□□□ 0.33
TFAP4-206ENST00000575320 FAM184AQ8NB25 1140 aa17.14■□□□□ 0.33
TFAP4-206ENST00000575320 EXOC6Q8TAG9 804 aa17.13■□□□□ 0.33
TFAP4-206ENST00000575320 LMOD3Q0VAK6 560 aa17.13■□□□□ 0.33
TFAP4-206ENST00000575320 TCEAL9Q9UHQ7 104 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms