RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 RRP7AQ9Y3A4 280 aaKnown RBP11.24□□□□□ -0.61
RPAIN-215ENST00000575112 KIF15Q9NS87 1388 aa11.23□□□□□ -0.61
RPAIN-215ENST00000575112 ANKRD50Q9ULJ7 1429 aa11.23□□□□□ -0.61
RPAIN-215ENST00000575112 ARHGEF11O15085 1522 aa11.23□□□□□ -0.61
RPAIN-215ENST00000575112 SAMD9Q5K651 1589 aa11.23□□□□□ -0.61
RPAIN-215ENST00000575112 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
RPAIN-215ENST00000575112 RCAN3Q9UKA8 241 aa11.23□□□□□ -0.61
RPAIN-215ENST00000575112 ABCC5O15440 1437 aa11.23□□□□□ -0.61
RPAIN-215ENST00000575112 TRAK1Q9UPV9 953 aa11.22□□□□□ -0.61
RPAIN-215ENST00000575112 DAPK1P53355 1430 aa11.22□□□□□ -0.61
RPAIN-215ENST00000575112 SLC24A1O60721 1099 aa11.21□□□□□ -0.61
RPAIN-215ENST00000575112 TMF1P82094 1093 aa11.21□□□□□ -0.61
RPAIN-215ENST00000575112 CRBNQ96SW2 442 aa11.21□□□□□ -0.62
RPAIN-215ENST00000575112 TCOF1Q13428 1488 aaKnown RBP11.2□□□□□ -0.62
RPAIN-215ENST00000575112 EFCAB2Q5VUJ9 269 aa11.19□□□□□ -0.62
RPAIN-215ENST00000575112 TMEM132EQ6IEE7 984 aa11.19□□□□□ -0.62
RPAIN-215ENST00000575112 BCL2L13Q9BXK5 485 aa11.19□□□□□ -0.62
RPAIN-215ENST00000575112 PZPP20742 1482 aa11.18□□□□□ -0.62
RPAIN-215ENST00000575112 CUL7Q14999 1698 aa11.18□□□□□ -0.62
RPAIN-215ENST00000575112 SPAG9O60271 1321 aaKnown RBP11.18□□□□□ -0.62
RPAIN-215ENST00000575112 SOX12O15370 315 aa11.18□□□□□ -0.62
RPAIN-215ENST00000575112 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
RPAIN-215ENST00000575112 POLR1AO95602 1720 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-215ENST00000575112 ABCA5Q8WWZ7 1642 aa11.17□□□□□ -0.62
RPAIN-215ENST00000575112 NFKBIBQ15653 356 aa11.16□□□□□ -0.62
RPAIN-215ENST00000575112 CFAP70Q5T0N1 1121 aa11.16□□□□□ -0.62
RPAIN-215ENST00000575112 CLUAP1Q96AJ1 413 aa11.16□□□□□ -0.62
RPAIN-215ENST00000575112 CCDC144AA2RUR9 1427 aa11.16□□□□□ -0.62
RPAIN-215ENST00000575112 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
RPAIN-215ENST00000575112 LAMC3Q9Y6N6 1575 aa11.16□□□□□ -0.62
RPAIN-215ENST00000575112 EIF5BO60841 1220 aaKnown RBP11.16□□□□□ -0.62
RPAIN-215ENST00000575112 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
RPAIN-215ENST00000575112 LRPPRCP42704 1394 aaKnown RBP11.16□□□□□ -0.62
RPAIN-215ENST00000575112 TCERG1O14776 1098 aaKnown RBP11.15□□□□□ -0.62
RPAIN-215ENST00000575112 U2SURPO15042 1029 aaKnown RBP11.15□□□□□ -0.62
RPAIN-215ENST00000575112 IQGAP2Q13576 1575 aa11.15□□□□□ -0.62
RPAIN-215ENST00000575112 NLRP13Q86W25 1043 aa11.15□□□□□ -0.63
RPAIN-215ENST00000575112 KDM5CP41229 1560 aa11.14□□□□□ -0.63
RPAIN-215ENST00000575112 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
RPAIN-215ENST00000575112 TROQ12816 1431 aaPredicted RBP11.14□□□□□ -0.63
RPAIN-215ENST00000575112 APAF1O14727 1248 aa11.14□□□□□ -0.63
RPAIN-215ENST00000575112 FRAT2O75474 233 aaPredicted RBP11.14□□□□□ -0.63
RPAIN-215ENST00000575112 MYBBP1AQ9BQG0 1328 aaKnown RBP11.13□□□□□ -0.63
RPAIN-215ENST00000575112 MIA2Q96PC5 1412 aa11.13□□□□□ -0.63
RPAIN-215ENST00000575112 WASHC2CQ9Y4E1 1318 aa11.13□□□□□ -0.63
RPAIN-215ENST00000575112 MBD5Q9P267 1494 aa11.12□□□□□ -0.63
RPAIN-215ENST00000575112 C9orf84Q5VXU9 1444 aa11.12□□□□□ -0.63
RPAIN-215ENST00000575112 SPRYD3Q8NCJ5 442 aa11.12□□□□□ -0.63
RPAIN-215ENST00000575112 NUP153P49790 1475 aaKnown RBP11.11□□□□□ -0.63
RPAIN-215ENST00000575112 GSE1Q14687 1217 aa11.11□□□□□ -0.63
RPAIN-215ENST00000575112 KIAA0586Q9BVV6 1533 aa11.11□□□□□ -0.63
RPAIN-215ENST00000575112 RALBP1Q15311 655 aa11.11□□□□□ -0.63
RPAIN-215ENST00000575112 KIAA1107Q9UPP5 1409 aa11.11□□□□□ -0.63
RPAIN-215ENST00000575112 SRPK2P78362 688 aaKnown RBP11.1□□□□□ -0.63
RPAIN-215ENST00000575112 MORC1Q86VD1 984 aa11.1□□□□□ -0.63
RPAIN-215ENST00000575112 CAMSAP2Q08AD1 1489 aa11.09□□□□□ -0.63
RPAIN-215ENST00000575112 GRIN2AQ12879 1464 aa11.09□□□□□ -0.63
RPAIN-215ENST00000575112 KIF21AQ7Z4S6 1674 aa11.09□□□□□ -0.63
RPAIN-215ENST00000575112 CYB5RLQ6IPT4 315 aa11.09□□□□□ -0.63
RPAIN-215ENST00000575112 IFT140Q96RY7 1462 aa11.08□□□□□ -0.63
RPAIN-215ENST00000575112 PER1O15534 1290 aaPredicted RBP11.08□□□□□ -0.64
RPAIN-215ENST00000575112 DNMT1P26358 1616 aaKnown RBP11.08□□□□□ -0.64
RPAIN-215ENST00000575112 WDR62O43379 1518 aa11.08□□□□□ -0.64
RPAIN-215ENST00000575112 GPATCH8Q9UKJ3 1502 aaKnown RBP11.08□□□□□ -0.64
RPAIN-215ENST00000575112 BRD4O60885 1362 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-215ENST00000575112 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
RPAIN-215ENST00000575112 RAPGEF3O95398 923 aa11.07□□□□□ -0.64
RPAIN-215ENST00000575112 U2AF1L5P0DN76 240 aaPredicted RBP11.07□□□□□ -0.64
RPAIN-215ENST00000575112 U2AF1Q01081 240 aaKnown RBP eCLIP11.07□□□□□ -0.64
RPAIN-215ENST00000575112 SLC12A5Q9H2X9 1139 aa11.07□□□□□ -0.64
RPAIN-215ENST00000575112 POGKQ9P215 609 aa11.07□□□□□ -0.64
RPAIN-215ENST00000575112 ROCK1Q13464 1354 aa11.07□□□□□ -0.64
RPAIN-215ENST00000575112 SPINK5Q9NQ38 1064 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-215ENST00000575112 SEC24BO95487 1268 aa11.06□□□□□ -0.64
RPAIN-215ENST00000575112 DISP3Q9P2K9 1392 aa11.05□□□□□ -0.64
RPAIN-215ENST00000575112 KIF14Q15058 1648 aa11.05□□□□□ -0.64
RPAIN-215ENST00000575112 ELL2O00472 640 aaPredicted RBP11.05□□□□□ -0.64
RPAIN-215ENST00000575112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.05□□□□□ -0.64
RPAIN-215ENST00000575112 MS4A1P11836 297 aa11.05□□□□□ -0.64
RPAIN-215ENST00000575112 ZBTB7CA1YPR0 619 aa11.04□□□□□ -0.64
RPAIN-215ENST00000575112 BCAR3O75815 825 aa11.04□□□□□ -0.64
RPAIN-215ENST00000575112 USP35Q9P2H5 1018 aa11.04□□□□□ -0.64
RPAIN-215ENST00000575112 COG6Q9Y2V7 657 aa11.04□□□□□ -0.64
RPAIN-215ENST00000575112 ARHGAP5Q13017 1502 aa11.04□□□□□ -0.64
RPAIN-215ENST00000575112 PLEKHH1Q9ULM0 1364 aa11.04□□□□□ -0.64
RPAIN-215ENST00000575112 KDM2BQ8NHM5 1336 aa11.04□□□□□ -0.64
RPAIN-215ENST00000575112 ARID4BQ4LE39 1312 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-215ENST00000575112 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-215ENST00000575112 FBLN1P23142 703 aa11.03□□□□□ -0.64
RPAIN-215ENST00000575112 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
RPAIN-215ENST00000575112 ESF1Q9H501 851 aaKnown RBP11.03□□□□□ -0.64
RPAIN-215ENST00000575112 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
RPAIN-215ENST00000575112 DMRT2Q9Y5R5 561 aa11.03□□□□□ -0.64
RPAIN-215ENST00000575112 ATP10BO94823 1461 aa11.03□□□□□ -0.64
RPAIN-215ENST00000575112 PLEKHH2Q8IVE3 1493 aa11.03□□□□□ -0.64
RPAIN-215ENST00000575112 PARD3Q8TEW0 1356 aa11.03□□□□□ -0.64
RPAIN-215ENST00000575112 DISP1Q96F81 1524 aa11.03□□□□□ -0.64
RPAIN-215ENST00000575112 SLKQ9H2G2 1235 aaPredicted RBP11.02□□□□□ -0.64
RPAIN-215ENST00000575112 SCAPERQ9BY12 1400 aa11.02□□□□□ -0.64
RPAIN-215ENST00000575112 RALGAPBQ86X10 1494 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms