RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 RGL2O15211 777 aa8.98□□□□□ -0.97
TRIM25-208ENST00000574234 PTPRKQ15262 1439 aa8.97□□□□□ -0.97
TRIM25-208ENST00000574234 POTEDQ86YR6 584 aa8.97□□□□□ -0.97
TRIM25-208ENST00000574234 PLCH2O75038 1416 aa8.97□□□□□ -0.97
TRIM25-208ENST00000574234 PIP4K2BP78356 416 aa8.96□□□□□ -0.98
TRIM25-208ENST00000574234 SPINK5Q9NQ38 1064 aaPredicted RBP8.95□□□□□ -0.98
TRIM25-208ENST00000574234 RGS17Q9UGC6 210 aaPredicted RBP8.95□□□□□ -0.98
TRIM25-208ENST00000574234 NCKAP5LQ9HCH0 1330 aa8.95□□□□□ -0.98
TRIM25-208ENST00000574234 RNF17Q9BXT8 1623 aaKnown RBP8.94□□□□□ -0.98
TRIM25-208ENST00000574234 CLTCQ00610 1675 aaKnown RBP8.94□□□□□ -0.98
TRIM25-208ENST00000574234 PLEKHD1A6NEE1 506 aa8.94□□□□□ -0.98
TRIM25-208ENST00000574234 SUPT5HO00267 1087 aaKnown RBP8.94□□□□□ -0.98
TRIM25-208ENST00000574234 MLH3Q9UHC1 1453 aa8.94□□□□□ -0.98
TRIM25-208ENST00000574234 NEURL4Q96JN8 1562 aa8.94□□□□□ -0.98
TRIM25-208ENST00000574234 ESF1Q9H501 851 aaKnown RBP8.93□□□□□ -0.98
TRIM25-208ENST00000574234 SHANK2Q9UPX8 1470 aa8.93□□□□□ -0.98
TRIM25-208ENST00000574234 SYNMO15061 1565 aa8.93□□□□□ -0.98
TRIM25-208ENST00000574234 DNMT1P26358 1616 aaKnown RBP8.93□□□□□ -0.98
TRIM25-208ENST00000574234 KIDINS220Q9ULH0 1771 aa8.93□□□□□ -0.98
TRIM25-208ENST00000574234 VWDEQ8N2E2 1590 aa8.92□□□□□ -0.98
TRIM25-208ENST00000574234 PRXQ9BXM0 1461 aa8.92□□□□□ -0.98
TRIM25-208ENST00000574234 STAG3Q9UJ98 1225 aa8.92□□□□□ -0.98
TRIM25-208ENST00000574234 ITSN2Q9NZM3 1697 aa8.91□□□□□ -0.98
TRIM25-208ENST00000574234 CDC42BPBQ9Y5S2 1711 aa8.91□□□□□ -0.98
TRIM25-208ENST00000574234 STRCP1A6NGW2 1772 aa8.9□□□□□ -0.98
TRIM25-208ENST00000574234 DEPDC5O75140 1603 aa8.88□□□□□ -0.99
TRIM25-208ENST00000574234 P3H3Q8IVL6 736 aa8.88□□□□□ -0.99
TRIM25-208ENST00000574234 ZBTB12Q9Y330 459 aaPredicted RBP8.88□□□□□ -0.99
TRIM25-208ENST00000574234 XIRP1Q702N8 1843 aaKnown RBP8.88□□□□□ -0.99
TRIM25-208ENST00000574234 ZMYM3Q14202 1370 aa8.87□□□□□ -0.99
TRIM25-208ENST00000574234 EFCAB2Q5VUJ9 269 aa8.87□□□□□ -0.99
TRIM25-208ENST00000574234 A2ML1A8K2U0 1454 aa8.87□□□□□ -0.99
TRIM25-208ENST00000574234 IQGAP1P46940 1657 aa8.87□□□□□ -0.99
TRIM25-208ENST00000574234 KIF14Q15058 1648 aa8.87□□□□□ -0.99
TRIM25-208ENST00000574234 SRCAPQ6ZRS2 3230 aa8.86□□□□□ -0.99
TRIM25-208ENST00000574234 ARHGAP5Q13017 1502 aa8.86□□□□□ -0.99
TRIM25-208ENST00000574234 POTEAQ6S8J7 498 aa8.86□□□□□ -0.99
TRIM25-208ENST00000574234 PLCD3Q8N3E9 789 aa8.86□□□□□ -0.99
TRIM25-208ENST00000574234 ABCC1P33527 1531 aa8.85□□□□□ -0.99
TRIM25-208ENST00000574234 PREX2Q70Z35 1606 aa8.85□□□□□ -0.99
TRIM25-208ENST00000574234 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
TRIM25-208ENST00000574234 AFAP1Q8N556 730 aa8.85□□□□□ -0.99
TRIM25-208ENST00000574234 CDK13Q14004 1512 aaKnown RBP8.85□□□□□ -0.99
TRIM25-208ENST00000574234 PLXNC1O60486 1568 aa8.84□□□□□ -0.99
TRIM25-208ENST00000574234 CAPN15O75808 1086 aa8.84□□□□□ -0.99
TRIM25-208ENST00000574234 NBR1Q14596 966 aa8.84□□□□□ -0.99
TRIM25-208ENST00000574234 MED14O60244 1454 aa8.83□□□□□ -1
TRIM25-208ENST00000574234 LRRC7Q96NW7 1537 aa8.83□□□□□ -1
TRIM25-208ENST00000574234 TIMELESSQ9UNS1 1208 aa8.82□□□□□ -1
TRIM25-208ENST00000574234 ZC3H13Q5T200 1668 aaKnown RBP8.81□□□□□ -1
TRIM25-208ENST00000574234 UPF1Q92900 1129 aaKnown RBP eCLIP8.81□□□□□ -1
TRIM25-208ENST00000574234 MYT1LQ9UL68 1186 aa8.81□□□□□ -1
TRIM25-208ENST00000574234 ADGBQ8N7X0 1667 aa8.81□□□□□ -1
TRIM25-208ENST00000574234 CDC42BPAQ5VT25 1732 aa8.8□□□□□ -1
TRIM25-208ENST00000574234 MIER1Q8N108 512 aa8.8□□□□□ -1
TRIM25-208ENST00000574234 SAMD9LQ8IVG5 1584 aa8.79□□□□□ -1
TRIM25-208ENST00000574234 ZNF692Q9BU19 519 aaPredicted RBP8.79□□□□□ -1
TRIM25-208ENST00000574234 LRRIQ1Q96JM4 1722 aa8.79□□□□□ -1
TRIM25-208ENST00000574234 ROBO1Q9Y6N7 1651 aa8.78□□□□□ -1
TRIM25-208ENST00000574234 INO80Q9ULG1 1556 aaPredicted RBP8.78□□□□□ -1
TRIM25-208ENST00000574234 CIZ1Q9ULV3 898 aaPredicted RBP8.78□□□□□ -1
TRIM25-208ENST00000574234 TULP1O00294 542 aaPredicted RBP8.77□□□□□ -1.01
TRIM25-208ENST00000574234 HS6ST3Q8IZP7 471 aa8.77□□□□□ -1.01
TRIM25-208ENST00000574234 NPHP4O75161 1426 aaPredicted RBP8.77□□□□□ -1.01
TRIM25-208ENST00000574234 FAM135BQ49AJ0 1406 aa8.77□□□□□ -1.01
TRIM25-208ENST00000574234 FAM135AQ9P2D6 1515 aa8.76□□□□□ -1.01
TRIM25-208ENST00000574234 SSUH2Q9Y2M2 353 aa8.76□□□□□ -1.01
TRIM25-208ENST00000574234 ATP7AQ04656 1500 aa8.75□□□□□ -1.01
TRIM25-208ENST00000574234 PHLPP1O60346 1717 aa8.75□□□□□ -1.01
TRIM25-208ENST00000574234 TROQ12816 1431 aaPredicted RBP8.75□□□□□ -1.01
TRIM25-208ENST00000574234 ABCB7O75027 752 aa8.75□□□□□ -1.01
TRIM25-208ENST00000574234 GTF3C3Q9Y5Q9 886 aa8.75□□□□□ -1.01
TRIM25-208ENST00000574234 UGGT1Q9NYU2 1555 aa8.74□□□□□ -1.01
TRIM25-208ENST00000574234 CLIP1P30622 1438 aa8.74□□□□□ -1.01
TRIM25-208ENST00000574234 ANKLE2Q86XL3 938 aa8.74□□□□□ -1.01
TRIM25-208ENST00000574234 RNF39Q9H2S5 420 aa8.74□□□□□ -1.01
TRIM25-208ENST00000574234 A2MP01023 1474 aa8.74□□□□□ -1.01
TRIM25-208ENST00000574234 NLRP1Q9C000 1473 aa8.74□□□□□ -1.01
TRIM25-208ENST00000574234 CDK12Q9NYV4 1490 aaPredicted RBP8.74□□□□□ -1.01
TRIM25-208ENST00000574234 SPDYE2BA6NHP3 402 aa8.73□□□□□ -1.01
TRIM25-208ENST00000574234 SPDYE6P0CI01 402 aa8.73□□□□□ -1.01
TRIM25-208ENST00000574234 SPDYE2Q495Y8 402 aa8.73□□□□□ -1.01
TRIM25-208ENST00000574234 CDK11AQ9UQ88 783 aaPredicted RBP8.73□□□□□ -1.01
TRIM25-208ENST00000574234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRIM25-208ENST00000574234 PZPP20742 1482 aa8.72□□□□□ -1.01
TRIM25-208ENST00000574234 KDM5DQ9BY66 1539 aa8.72□□□□□ -1.01
TRIM25-208ENST00000574234 LRRC9Q6ZRR7 1453 aa8.71□□□□□ -1.01
TRIM25-208ENST00000574234 THEMISQ8N1K5 641 aaPredicted RBP8.71□□□□□ -1.02
TRIM25-208ENST00000574234 SHPRHQ149N8 1683 aa8.71□□□□□ -1.02
TRIM25-208ENST00000574234 TNRQ92752 1358 aa8.71□□□□□ -1.02
TRIM25-208ENST00000574234 SYCP2Q9BX26 1530 aa8.7□□□□□ -1.02
TRIM25-208ENST00000574234 ZBTB47Q9UFB7 747 aaPredicted RBP8.7□□□□□ -1.02
TRIM25-208ENST00000574234 UBR1Q8IWV7 1749 aa8.7□□□□□ -1.02
TRIM25-208ENST00000574234 COL16A1Q07092 1604 aaPredicted RBP8.69□□□□□ -1.02
TRIM25-208ENST00000574234 FMN1Q68DA7 1419 aa8.69□□□□□ -1.02
TRIM25-208ENST00000574234 ZNF772Q68DY9 489 aaPredicted RBP8.68□□□□□ -1.02
TRIM25-208ENST00000574234 ERICH6Q7L0X2 663 aa8.68□□□□□ -1.02
TRIM25-208ENST00000574234 JCADQ9P266 1359 aa8.68□□□□□ -1.02
TRIM25-208ENST00000574234 SPAG9O60271 1321 aaKnown RBP8.67□□□□□ -1.02
TRIM25-208ENST00000574234 NKX1-1Q15270 411 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms