RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-208ENST00000574085 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
TRPV1-208ENST00000574085 PBRM1Q86U86 1689 aa16.66■□□□□ 0.26
TRPV1-208ENST00000574085 FRAT2O75474 233 aaPredicted RBP16.66■□□□□ 0.26
TRPV1-208ENST00000574085 ST20-MTHFSA0A0A6YYL1 179 aa16.65■□□□□ 0.26
TRPV1-208ENST00000574085 FAM43AQ8N2R8 423 aa16.65■□□□□ 0.26
TRPV1-208ENST00000574085 E9PCH4 1651 aa16.64■□□□□ 0.26
TRPV1-208ENST00000574085 PKD2Q13563 968 aa16.64■□□□□ 0.25
TRPV1-208ENST00000574085 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
TRPV1-208ENST00000574085 UHRF1BP1Q6BDS2 1440 aa16.63■□□□□ 0.25
TRPV1-208ENST00000574085 KDM2BQ8NHM5 1336 aa16.63■□□□□ 0.25
TRPV1-208ENST00000574085 WDR62O43379 1518 aa16.63■□□□□ 0.25
TRPV1-208ENST00000574085 ZNF608Q9ULD9 1512 aaPredicted RBP16.63■□□□□ 0.25
TRPV1-208ENST00000574085 FAM161AQ3B820 660 aa16.62■□□□□ 0.25
TRPV1-208ENST00000574085 C20orf194Q5TEA3 1177 aa16.62■□□□□ 0.25
TRPV1-208ENST00000574085 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
TRPV1-208ENST00000574085 PARD3Q8TEW0 1356 aa16.61■□□□□ 0.25
TRPV1-208ENST00000574085 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
TRPV1-208ENST00000574085 C8orf34Q49A92 452 aa16.61■□□□□ 0.25
TRPV1-208ENST00000574085 IQGAP2Q13576 1575 aa16.6■□□□□ 0.25
TRPV1-208ENST00000574085 CENPQQ7L2Z9 268 aaPredicted RBP16.6■□□□□ 0.25
TRPV1-208ENST00000574085 KDM2AQ9Y2K7 1162 aa16.58■□□□□ 0.24
TRPV1-208ENST00000574085 BLMP54132 1417 aaPredicted RBP16.57■□□□□ 0.24
TRPV1-208ENST00000574085 ADGBQ8N7X0 1667 aa16.55■□□□□ 0.24
TRPV1-208ENST00000574085 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
TRPV1-208ENST00000574085 RGS3P49796 1198 aa16.54■□□□□ 0.24
TRPV1-208ENST00000574085 ZMYM4Q5VZL5 1548 aa16.53■□□□□ 0.24
TRPV1-208ENST00000574085 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
TRPV1-208ENST00000574085 CAMSAP2Q08AD1 1489 aa16.53■□□□□ 0.24
TRPV1-208ENST00000574085 PLEKHH2Q8IVE3 1493 aa16.53■□□□□ 0.24
TRPV1-208ENST00000574085 A0A0U1RQG5 324 aaPredicted RBP16.52■□□□□ 0.24
TRPV1-208ENST00000574085 CC2D1BQ5T0F9 858 aaKnown RBP16.52■□□□□ 0.24
TRPV1-208ENST00000574085 INSRP06213 1382 aa16.51■□□□□ 0.23
TRPV1-208ENST00000574085 PER1O15534 1290 aaPredicted RBP16.5■□□□□ 0.23
TRPV1-208ENST00000574085 POGKQ9P215 609 aa16.5■□□□□ 0.23
TRPV1-208ENST00000574085 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
TRPV1-208ENST00000574085 FGD1P98174 961 aa16.49■□□□□ 0.23
TRPV1-208ENST00000574085 RRAGDQ9NQL2 400 aaPredicted RBP16.49■□□□□ 0.23
TRPV1-208ENST00000574085 ADGRL2O95490 1459 aa16.48■□□□□ 0.23
TRPV1-208ENST00000574085 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
TRPV1-208ENST00000574085 ZNF777Q9ULD5 760 aaPredicted RBP16.48■□□□□ 0.23
TRPV1-208ENST00000574085 ANKRD50Q9ULJ7 1429 aa16.47■□□□□ 0.23
TRPV1-208ENST00000574085 NUP155O75694 1391 aa16.47■□□□□ 0.23
TRPV1-208ENST00000574085 RBM10P98175 930 aaKnown RBP16.47■□□□□ 0.23
TRPV1-208ENST00000574085 AAMPQ13685 434 aa16.47■□□□□ 0.23
TRPV1-208ENST00000574085 ANKRD30AQ9BXX3 1397 aa16.47■□□□□ 0.23
TRPV1-208ENST00000574085 PDE4CQ08493 712 aa16.47■□□□□ 0.23
TRPV1-208ENST00000574085 CROCC2H7BZ55 1655 aa16.46■□□□□ 0.22
TRPV1-208ENST00000574085 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
TRPV1-208ENST00000574085 NUP153P49790 1475 aaKnown RBP16.45■□□□□ 0.22
TRPV1-208ENST00000574085 DUSP27Q5VZP5 1158 aa16.45■□□□□ 0.22
TRPV1-208ENST00000574085 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.45■□□□□ 0.22
TRPV1-208ENST00000574085 EIF4G3O43432 1585 aaKnown RBP16.44■□□□□ 0.22
TRPV1-208ENST00000574085 ADAMTS8Q9UP79 889 aa16.44■□□□□ 0.22
TRPV1-208ENST00000574085 PLEKHH1Q9ULM0 1364 aa16.43■□□□□ 0.22
TRPV1-208ENST00000574085 KIAA0556O60303 1618 aa16.43■□□□□ 0.22
TRPV1-208ENST00000574085 GRIN2AQ12879 1464 aa16.43■□□□□ 0.22
TRPV1-208ENST00000574085 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
TRPV1-208ENST00000574085 L1TD1Q5T7N2 865 aaKnown RBP16.43■□□□□ 0.22
TRPV1-208ENST00000574085 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
TRPV1-208ENST00000574085 ITSN2Q9NZM3 1697 aa16.42■□□□□ 0.22
TRPV1-208ENST00000574085 PANK3Q9H999 370 aa16.42■□□□□ 0.22
TRPV1-208ENST00000574085 USP19O94966 1318 aa16.42■□□□□ 0.22
TRPV1-208ENST00000574085 PRG4Q92954 1404 aaPredicted RBP16.42■□□□□ 0.22
TRPV1-208ENST00000574085 FBLN2P98095 1184 aa16.42■□□□□ 0.22
TRPV1-208ENST00000574085 SLKQ9H2G2 1235 aaPredicted RBP16.41■□□□□ 0.22
TRPV1-208ENST00000574085 COL17A1Q9UMD9 1497 aaPredicted RBP16.41■□□□□ 0.22
TRPV1-208ENST00000574085 HSP90AA2PQ14568 343 aaPredicted RBP16.41■□□□□ 0.22
TRPV1-208ENST00000574085 DISP3Q9P2K9 1392 aa16.4■□□□□ 0.22
TRPV1-208ENST00000574085 TRPM1Q7Z4N2 1603 aa16.4■□□□□ 0.22
TRPV1-208ENST00000574085 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
TRPV1-208ENST00000574085 RRP9O43818 475 aaKnown RBP16.4■□□□□ 0.22
TRPV1-208ENST00000574085 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
TRPV1-208ENST00000574085 KDM5DQ9BY66 1539 aa16.39■□□□□ 0.21
TRPV1-208ENST00000574085 BECN1Q14457 450 aa16.39■□□□□ 0.21
TRPV1-208ENST00000574085 RAPGEF6Q8TEU7 1601 aa16.39■□□□□ 0.21
TRPV1-208ENST00000574085 TROQ12816 1431 aaPredicted RBP16.39■□□□□ 0.21
TRPV1-208ENST00000574085 NBPF1Q3BBV0 1214 aa16.39■□□□□ 0.21
TRPV1-208ENST00000574085 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
TRPV1-208ENST00000574085 PRAG1Q86YV5 1406 aa16.38■□□□□ 0.21
TRPV1-208ENST00000574085 ARXQ96QS3 562 aa16.38■□□□□ 0.21
TRPV1-208ENST00000574085 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
TRPV1-208ENST00000574085 SEC24BO95487 1268 aa16.37■□□□□ 0.21
TRPV1-208ENST00000574085 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
TRPV1-208ENST00000574085 EIF3AQ14152 1382 aaKnown RBP16.37■□□□□ 0.21
TRPV1-208ENST00000574085 ZNF521Q96K83 1311 aa16.36■□□□□ 0.21
TRPV1-208ENST00000574085 NAP1L5Q96NT1 182 aaPredicted RBP16.36■□□□□ 0.21
TRPV1-208ENST00000574085 TESK2Q96S53 571 aa16.35■□□□□ 0.21
TRPV1-208ENST00000574085 IGHDP01880 384 aa16.34■□□□□ 0.21
TRPV1-208ENST00000574085 PLB1Q6P1J6 1458 aa16.34■□□□□ 0.21
TRPV1-208ENST00000574085 ERBINQ96RT1 1412 aa16.34■□□□□ 0.21
TRPV1-208ENST00000574085 SLFN5Q08AF3 891 aa16.33■□□□□ 0.21
TRPV1-208ENST00000574085 C9orf84Q5VXU9 1444 aa16.33■□□□□ 0.21
TRPV1-208ENST00000574085 PDIA4P13667 645 aaKnown RBP16.33■□□□□ 0.2
TRPV1-208ENST00000574085 RGL3Q3MIN7 710 aa16.32■□□□□ 0.2
TRPV1-208ENST00000574085 ANTXR1Q9H6X2 564 aa16.32■□□□□ 0.2
TRPV1-208ENST00000574085 PNNQ9H307 717 aaKnown RBP16.32■□□□□ 0.2
TRPV1-208ENST00000574085 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
TRPV1-208ENST00000574085 BCAR3O75815 825 aa16.32■□□□□ 0.2
TRPV1-208ENST00000574085 XRCC6P12956 609 aaKnown RBP eCLIP16.32■□□□□ 0.2
TRPV1-208ENST00000574085 NLRP1Q9C000 1473 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms