RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 PIP4P2Q8N4L2 257 aa3.54□□□□□ -1.84
CHD3-217ENST00000574022 BEGAINQ9BUH8 593 aa3.54□□□□□ -1.84
CHD3-217ENST00000574022 ZNF330Q9Y3S2 320 aaPredicted RBP3.54□□□□□ -1.84
CHD3-217ENST00000574022 ACIN1Q9UKV3 1341 aaKnown RBP3.53□□□□□ -1.84
CHD3-217ENST00000574022 SPDYE5A6NIY4 337 aa3.53□□□□□ -1.84
CHD3-217ENST00000574022 TMEM121BQ9BXQ6 578 aaPredicted RBP3.53□□□□□ -1.84
CHD3-217ENST00000574022 PLSCR2Q9NRY7 297 aa3.53□□□□□ -1.84
CHD3-217ENST00000574022 TRIM35Q9UPQ4 493 aa3.53□□□□□ -1.84
CHD3-217ENST00000574022 COG6Q9Y2V7 657 aa3.53□□□□□ -1.84
CHD3-217ENST00000574022 BOLA1Q9Y3E2 137 aa3.53□□□□□ -1.84
CHD3-217ENST00000574022 TMCO4Q5TGY1 634 aa3.52□□□□□ -1.85
CHD3-217ENST00000574022 PDCD7Q8N8D1 485 aaKnown RBP3.52□□□□□ -1.85
CHD3-217ENST00000574022 RETREG2Q8NC44 543 aa3.52□□□□□ -1.85
CHD3-217ENST00000574022 BANK1Q8NDB2 785 aa3.52□□□□□ -1.85
CHD3-217ENST00000574022 GZF1Q9H116 711 aaPredicted RBP3.52□□□□□ -1.85
CHD3-217ENST00000574022 NPDC1Q9NQX5 325 aaPredicted RBP3.52□□□□□ -1.85
CHD3-217ENST00000574022 BMP2KQ9NSY1 1161 aaPredicted RBP3.52□□□□□ -1.85
CHD3-217ENST00000574022 PPP1R15AO75807 674 aaPredicted RBP3.51□□□□□ -1.85
CHD3-217ENST00000574022 PDE4CQ08493 712 aa3.51□□□□□ -1.85
CHD3-217ENST00000574022 TMEM259Q4ZIN3 620 aa3.51□□□□□ -1.85
CHD3-217ENST00000574022 MYSM1Q5VVJ2 828 aa3.51□□□□□ -1.85
CHD3-217ENST00000574022 CHRDL2Q6WN34 429 aa3.51□□□□□ -1.85
CHD3-217ENST00000574022 WWC1Q8IX03 1113 aa3.51□□□□□ -1.85
CHD3-217ENST00000574022 RGS22Q8NE09 1264 aa3.51□□□□□ -1.85
CHD3-217ENST00000574022 PHOX2BQ99453 314 aa3.51□□□□□ -1.85
CHD3-217ENST00000574022 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.51□□□□□ -1.85
CHD3-217ENST00000574022 SNRKQ9NRH2 765 aa3.51□□□□□ -1.85
CHD3-217ENST00000574022 FAM217BQ9NTX9 383 aaPredicted RBP3.51□□□□□ -1.85
CHD3-217ENST00000574022 MTMR7Q9Y216 660 aa3.51□□□□□ -1.85
CHD3-217ENST00000574022 MAP3K7O43318 606 aa3.5□□□□□ -1.85
CHD3-217ENST00000574022 OATP04181 439 aa3.5□□□□□ -1.85
CHD3-217ENST00000574022 RFC5P40937 340 aa3.5□□□□□ -1.85
CHD3-217ENST00000574022 CLK2P49760 499 aaKnown RBP3.5□□□□□ -1.85
CHD3-217ENST00000574022 MFAP1P55081 439 aaKnown RBP3.5□□□□□ -1.85
CHD3-217ENST00000574022 EN1Q05925 392 aaPredicted RBP3.5□□□□□ -1.85
CHD3-217ENST00000574022 IRF5Q13568 498 aa3.5□□□□□ -1.85
CHD3-217ENST00000574022 DIXDC1Q155Q3 683 aa3.5□□□□□ -1.85
CHD3-217ENST00000574022 EPAS1Q99814 870 aa3.5□□□□□ -1.85
CHD3-217ENST00000574022 OCEL1Q9H607 264 aa3.5□□□□□ -1.85
CHD3-217ENST00000574022 CDHR5Q9HBB8 845 aa3.5□□□□□ -1.85
CHD3-217ENST00000574022 ANO8Q9HCE9 1232 aaPredicted RBP3.5□□□□□ -1.85
CHD3-217ENST00000574022 PRM3Q9NNZ6 103 aa3.5□□□□□ -1.85
CHD3-217ENST00000574022 FBXW7Q969H0 707 aa3.49□□□□□ -1.85
CHD3-217ENST00000574022 RBM33Q96EV2 1170 aaKnown RBP3.49□□□□□ -1.85
CHD3-217ENST00000574022 L3MBTL3Q96JM7 780 aaPredicted RBP3.49□□□□□ -1.85
CHD3-217ENST00000574022 CALR3Q96L12 384 aaKnown RBP3.49□□□□□ -1.85
CHD3-217ENST00000574022 TBC1D2Q9BYX2 928 aa3.49□□□□□ -1.85
CHD3-217ENST00000574022 GDPD2Q9HCC8 539 aa3.49□□□□□ -1.85
CHD3-217ENST00000574022 PATL2C9JE40 543 aaKnown RBP3.48□□□□□ -1.85
CHD3-217ENST00000574022 PHF14O94880 888 aa3.48□□□□□ -1.85
CHD3-217ENST00000574022 IRX5P78411 483 aaPredicted RBP3.48□□□□□ -1.85
CHD3-217ENST00000574022 FAM161AQ3B820 660 aa3.48□□□□□ -1.85
CHD3-217ENST00000574022 METTL3Q86U44 580 aaKnown RBP3.48□□□□□ -1.85
CHD3-217ENST00000574022 PTCD2Q8WV60 388 aaKnown RBP3.48□□□□□ -1.85
CHD3-217ENST00000574022 NLRP7Q8WX94 980 aa3.48□□□□□ -1.85
CHD3-217ENST00000574022 C19orf67A6NJJ6 358 aa3.47□□□□□ -1.85
CHD3-217ENST00000574022 ABL2P42684 1182 aa3.47□□□□□ -1.85
CHD3-217ENST00000574022 RBM25P49756 843 aaKnown RBP3.47□□□□□ -1.85
CHD3-217ENST00000574022 FOXD4L5Q5VV16 416 aaPredicted RBP3.47□□□□□ -1.85
CHD3-217ENST00000574022 PPP2R2DQ66LE6 453 aa3.47□□□□□ -1.85
CHD3-217ENST00000574022 TMEM92Q6UXU6 159 aa3.47□□□□□ -1.85
CHD3-217ENST00000574022 RIC3Q7Z5B4 369 aa3.47□□□□□ -1.85
CHD3-217ENST00000574022 SLAIN1Q8ND83 568 aa3.47□□□□□ -1.85
CHD3-217ENST00000574022 PXYLP1Q8TE99 480 aa3.47□□□□□ -1.85
CHD3-217ENST00000574022 FOXD4L4Q8WXT5 416 aaPredicted RBP3.47□□□□□ -1.85
CHD3-217ENST00000574022 GALR2O43603 387 aaPredicted RBP3.46□□□□□ -1.86
CHD3-217ENST00000574022 PLCG2P16885 1265 aa3.46□□□□□ -1.86
CHD3-217ENST00000574022 ATN1P54259 1190 aaPredicted RBP3.46□□□□□ -1.86
CHD3-217ENST00000574022 TSR1Q2NL82 804 aaKnown RBP3.46□□□□□ -1.86
CHD3-217ENST00000574022 IER5LQ5T953 404 aa3.46□□□□□ -1.86
CHD3-217ENST00000574022 FBXO31Q5XUX0 539 aaPredicted RBP3.46□□□□□ -1.86
CHD3-217ENST00000574022 TYW1BQ6NUM6 668 aa3.46□□□□□ -1.86
CHD3-217ENST00000574022 MTMR14Q8NCE2 650 aa3.46□□□□□ -1.86
CHD3-217ENST00000574022 GLMNQ92990 594 aa3.46□□□□□ -1.86
CHD3-217ENST00000574022 LIMD1Q9UGP4 676 aa3.46□□□□□ -1.86
CHD3-217ENST00000574022 PCDHGA10Q9Y5H3 936 aa3.46□□□□□ -1.86
CHD3-217ENST00000574022 ADGRG1Q9Y653 693 aa3.46□□□□□ -1.86
CHD3-217ENST00000574022 POM121CA8CG34 1229 aa3.45□□□□□ -1.86
CHD3-217ENST00000574022 E9PSI1 815 aa3.45□□□□□ -1.86
CHD3-217ENST00000574022 BRD1O95696 1058 aa3.45□□□□□ -1.86
CHD3-217ENST00000574022 KCNA1Q09470 495 aa3.45□□□□□ -1.86
CHD3-217ENST00000574022 CERKQ8TCT0 537 aa3.45□□□□□ -1.86
CHD3-217ENST00000574022 SPIRE2Q8WWL2 714 aa3.45□□□□□ -1.86
CHD3-217ENST00000574022 SHROOM4Q9ULL8 1493 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 SPTLC1O15269 473 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 AP1G2O75843 785 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 SLC34A2O95436 690 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 CSB-PGBD3P0DP91 1061 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 RFX1P22670 979 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 CSPP1Q1MSJ5 1256 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 TUSC1Q2TAM9 212 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 HDGFL1Q5TGJ6 251 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 PADI6Q6TGC4 694 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 NUTM1Q86Y26 1132 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 RBM46Q8TBY0 533 aaKnown RBP3.44□□□□□ -1.86
CHD3-217ENST00000574022 PBXIP1Q96AQ6 731 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 ZNF428Q96B54 188 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 TBC1D2BQ9UPU7 963 aa3.44□□□□□ -1.86
CHD3-217ENST00000574022 LOC105371045A0A1W2PR82 267 aa3.43□□□□□ -1.86
CHD3-217ENST00000574022 SOCS7O14512 581 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms