RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 C11orf95C9JLR9 678 aaPredicted RBP22.24■■□□□ 1.15
USP43-204ENST00000573955 ABCA9Q8IUA7 1624 aa22.22■■□□□ 1.15
USP43-204ENST00000573955 SCAPERQ9BY12 1400 aa22.22■■□□□ 1.15
USP43-204ENST00000573955 UNC13BO14795 1591 aa22.21■■□□□ 1.15
USP43-204ENST00000573955 DCAF11Q8TEB1 546 aa22.21■■□□□ 1.15
USP43-204ENST00000573955 CD109Q6YHK3 1445 aa22.2■■□□□ 1.14
USP43-204ENST00000573955 ANO8Q9HCE9 1232 aaPredicted RBP22.2■■□□□ 1.14
USP43-204ENST00000573955 RGL3Q3MIN7 710 aa22.2■■□□□ 1.14
USP43-204ENST00000573955 ADGRL1O94910 1474 aa22.19■■□□□ 1.14
USP43-204ENST00000573955 ARAP3Q8WWN8 1544 aa22.18■■□□□ 1.14
USP43-204ENST00000573955 ERBINQ96RT1 1412 aa22.18■■□□□ 1.14
USP43-204ENST00000573955 CCDC144AA2RUR9 1427 aa22.17■■□□□ 1.14
USP43-204ENST00000573955 RAPGEF3O95398 923 aa22.16■■□□□ 1.14
USP43-204ENST00000573955 ZFYVE16Q7Z3T8 1539 aa22.16■■□□□ 1.14
USP43-204ENST00000573955 PLA2R1Q13018 1463 aa22.14■■□□□ 1.13
USP43-204ENST00000573955 FAM69CQ0P6D2 419 aa22.14■■□□□ 1.13
USP43-204ENST00000573955 IQGAP3Q86VI3 1631 aa22.14■■□□□ 1.13
USP43-204ENST00000573955 SPATA31E1Q6ZUB1 1445 aa22.14■■□□□ 1.13
USP43-204ENST00000573955 POLR3GLQ9BT43 218 aa22.13■■□□□ 1.13
USP43-204ENST00000573955 CCDC7Q96M83 1385 aa22.13■■□□□ 1.13
USP43-204ENST00000573955 USP47Q96K76 1375 aa22.13■■□□□ 1.13
USP43-204ENST00000573955 RTEL1-TNFRSF6BF6WH68 1400 aa22.11■■□□□ 1.13
USP43-204ENST00000573955 CARD11Q9BXL7 1154 aa22.1■■□□□ 1.13
USP43-204ENST00000573955 ATP7AQ04656 1500 aa22.1■■□□□ 1.13
USP43-204ENST00000573955 KIF7Q2M1P5 1343 aa22.1■■□□□ 1.13
USP43-204ENST00000573955 MAGI2Q86UL8 1455 aa22.09■■□□□ 1.13
USP43-204ENST00000573955 KIF3BO15066 747 aa22.09■■□□□ 1.13
USP43-204ENST00000573955 UHRF1BP1Q6BDS2 1440 aa22.08■■□□□ 1.12
USP43-204ENST00000573955 CCER2I3L3R5 266 aa22.07■■□□□ 1.12
USP43-204ENST00000573955 CNTLNQ9NXG0 1405 aa22.06■■□□□ 1.12
USP43-204ENST00000573955 TSPOAP1O95153 1857 aa22.06■■□□□ 1.12
USP43-204ENST00000573955 INO80Q9ULG1 1556 aaPredicted RBP22.05■■□□□ 1.12
USP43-204ENST00000573955 RALGAPBQ86X10 1494 aa22.05■■□□□ 1.12
USP43-204ENST00000573955 CNGB1Q14028 1251 aaPredicted RBP22.04■■□□□ 1.12
USP43-204ENST00000573955 ROCK2O75116 1388 aaKnown RBP22.02■■□□□ 1.12
USP43-204ENST00000573955 KDM5CP41229 1560 aa22.02■■□□□ 1.12
USP43-204ENST00000573955 BCORL1Q5H9F3 1711 aa22.01■■□□□ 1.11
USP43-204ENST00000573955 A2MP01023 1474 aa22■■□□□ 1.11
USP43-204ENST00000573955 ST20-MTHFSA0A0A6YYL1 179 aa21.99■■□□□ 1.11
USP43-204ENST00000573955 NBPF1Q3BBV0 1214 aa21.99■■□□□ 1.11
USP43-204ENST00000573955 UBE2Q2Q8WVN8 375 aa21.99■■□□□ 1.11
USP43-204ENST00000573955 E9PCH4 1651 aa21.98■■□□□ 1.11
USP43-204ENST00000573955 DHX29Q7Z478 1369 aaKnown RBP21.98■■□□□ 1.11
USP43-204ENST00000573955 DAXXQ9UER7 740 aaPredicted RBP21.98■■□□□ 1.11
USP43-204ENST00000573955 PRAG1Q86YV5 1406 aa21.98■■□□□ 1.11
USP43-204ENST00000573955 ZNF518AQ6AHZ1 1483 aa21.98■■□□□ 1.11
USP43-204ENST00000573955 KANK1Q14678 1352 aa21.97■■□□□ 1.11
USP43-204ENST00000573955 KIDINS220Q9ULH0 1771 aa21.96■■□□□ 1.11
USP43-204ENST00000573955 GGT6Q6P531 493 aa21.96■■□□□ 1.11
USP43-204ENST00000573955 POGZQ7Z3K3 1410 aa21.95■■□□□ 1.1
USP43-204ENST00000573955 POLR1AO95602 1720 aaPredicted RBP21.94■■□□□ 1.1
USP43-204ENST00000573955 ATP10AO60312 1499 aa21.94■■□□□ 1.1
USP43-204ENST00000573955 DEPDC5O75140 1603 aa21.94■■□□□ 1.1
USP43-204ENST00000573955 CCDC184Q52MB2 194 aa21.93■■□□□ 1.1
USP43-204ENST00000573955 PRKRIP1Q9H875 184 aaPredicted RBP21.92■■□□□ 1.1
USP43-204ENST00000573955 TRPM1Q7Z4N2 1603 aa21.91■■□□□ 1.1
USP43-204ENST00000573955 DIP2BQ9P265 1576 aa21.91■■□□□ 1.1
USP43-204ENST00000573955 MAP3K4Q9Y6R4 1608 aa21.9■■□□□ 1.1
USP43-204ENST00000573955 CFAP74Q9C0B2 1584 aa21.89■■□□□ 1.09
USP43-204ENST00000573955 TET3O43151 1660 aa21.88■■□□□ 1.09
USP43-204ENST00000573955 MROH1Q8NDA8 1641 aa21.88■■□□□ 1.09
USP43-204ENST00000573955 SPHKAPQ2M3C7 1700 aa21.87■■□□□ 1.09
USP43-204ENST00000573955 YEATS2Q9ULM3 1422 aa21.87■■□□□ 1.09
USP43-204ENST00000573955 TRPM2O94759 1503 aa21.87■■□□□ 1.09
USP43-204ENST00000573955 CFAP65Q6ZU64 1925 aaKnown RBP21.87■■□□□ 1.09
USP43-204ENST00000573955 PRDM15P57071 1507 aaPredicted RBP21.86■■□□□ 1.09
USP43-204ENST00000573955 CLTCL1P53675 1640 aa21.86■■□□□ 1.09
USP43-204ENST00000573955 EIF2AK4Q9P2K8 1649 aaKnown RBP21.86■■□□□ 1.09
USP43-204ENST00000573955 VWDEQ8N2E2 1590 aa21.86■■□□□ 1.09
USP43-204ENST00000573955 UGGT1Q9NYU2 1555 aa21.85■■□□□ 1.09
USP43-204ENST00000573955 PTPRTO14522 1441 aa21.84■■□□□ 1.09
USP43-204ENST00000573955 HECW2Q9P2P5 1572 aa21.83■■□□□ 1.09
USP43-204ENST00000573955 RBM19Q9Y4C8 960 aaKnown RBP21.83■■□□□ 1.09
USP43-204ENST00000573955 NEO1Q92859 1461 aa21.83■■□□□ 1.09
USP43-204ENST00000573955 ABCA6Q8N139 1617 aa21.83■■□□□ 1.09
USP43-204ENST00000573955 EIF5BO60841 1220 aaKnown RBP21.83■■□□□ 1.08
USP43-204ENST00000573955 HNRNPUQ00839 825 aaKnown RBP eCLIP21.83■■□□□ 1.08
USP43-204ENST00000573955 MRS2Q9HD23 443 aa21.83■■□□□ 1.08
USP43-204ENST00000573955 SALL2Q9Y467 1007 aaPredicted RBP21.82■■□□□ 1.08
USP43-204ENST00000573955 FAM9BQ8IZU0 186 aa21.82■■□□□ 1.08
USP43-204ENST00000573955 MLH3Q9UHC1 1453 aa21.82■■□□□ 1.08
USP43-204ENST00000573955 FRMPD1Q5SYB0 1578 aa21.81■■□□□ 1.08
USP43-204ENST00000573955 ARID4BQ4LE39 1312 aaPredicted RBP21.8■■□□□ 1.08
USP43-204ENST00000573955 CEP152O94986 1710 aa21.8■■□□□ 1.08
USP43-204ENST00000573955 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
USP43-204ENST00000573955 GPRASP1Q5JY77 1395 aa21.79■■□□□ 1.08
USP43-204ENST00000573955 PPRC1Q5VV67 1664 aaKnown RBP21.78■■□□□ 1.08
USP43-204ENST00000573955 CHGAP10645 457 aaKnown RBP21.78■■□□□ 1.08
USP43-204ENST00000573955 GLI2P10070 1586 aa21.78■■□□□ 1.08
USP43-204ENST00000573955 EFCAB6Q5THR3 1501 aa21.78■■□□□ 1.08
USP43-204ENST00000573955 RICTORQ6R327 1708 aa21.78■■□□□ 1.08
USP43-204ENST00000573955 MLECQ14165 292 aa21.77■■□□□ 1.08
USP43-204ENST00000573955 KIF13AQ9H1H9 1805 aa21.76■■□□□ 1.07
USP43-204ENST00000573955 COL17A1Q9UMD9 1497 aaPredicted RBP21.76■■□□□ 1.07
USP43-204ENST00000573955 WASHC2CQ9Y4E1 1318 aa21.76■■□□□ 1.07
USP43-204ENST00000573955 ERICH6BQ5W0A0 696 aa21.76■■□□□ 1.07
USP43-204ENST00000573955 MADDQ8WXG6 1647 aa21.75■■□□□ 1.07
USP43-204ENST00000573955 DISP3Q9P2K9 1392 aa21.73■■□□□ 1.07
USP43-204ENST00000573955 TRHP20396 242 aaPredicted RBP21.73■■□□□ 1.07
USP43-204ENST00000573955 DEKP35659 375 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms