RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 DNMT1P26358 1616 aaKnown RBP35.07■■■■□ 3.21
SNF8-216ENST00000573795 KIF3BO15066 747 aa35.07■■■■□ 3.2
SNF8-216ENST00000573795 A2ML1A8K2U0 1454 aa35.07■■■■□ 3.2
SNF8-216ENST00000573795 PZPP20742 1482 aa35.03■■■■□ 3.2
SNF8-216ENST00000573795 PKD2Q13563 968 aa35.03■■■■□ 3.2
SNF8-216ENST00000573795 ZNF335Q9H4Z2 1342 aaPredicted RBP35.01■■■■□ 3.19
SNF8-216ENST00000573795 MAP3K1Q13233 1512 aa35.01■■■■□ 3.19
SNF8-216ENST00000573795 MAST1Q9Y2H9 1570 aa35■■■■□ 3.19
SNF8-216ENST00000573795 FBXO31Q5XUX0 539 aaPredicted RBP35■■■■□ 3.19
SNF8-216ENST00000573795 KANK4Q5T7N3 995 aaPredicted RBP34.98■■■■□ 3.19
SNF8-216ENST00000573795 TNRQ92752 1358 aa34.98■■■■□ 3.19
SNF8-216ENST00000573795 RNF17Q9BXT8 1623 aaKnown RBP34.96■■■■□ 3.19
SNF8-216ENST00000573795 TSPY4P0CV99 314 aa34.94■■■■□ 3.18
SNF8-216ENST00000573795 TSPY10P0CW01 314 aa34.94■■■■□ 3.18
SNF8-216ENST00000573795 POLR1AO95602 1720 aaPredicted RBP34.94■■■■□ 3.18
SNF8-216ENST00000573795 NEURL4Q96JN8 1562 aa34.93■■■■□ 3.18
SNF8-216ENST00000573795 WASHC2CQ9Y4E1 1318 aa34.93■■■■□ 3.18
SNF8-216ENST00000573795 MYOM3Q5VTT5 1437 aa34.9■■■■□ 3.18
SNF8-216ENST00000573795 MIA2Q96PC5 1412 aa34.89■■■■□ 3.18
SNF8-216ENST00000573795 EIF2AK4Q9P2K8 1649 aaKnown RBP34.88■■■■□ 3.17
SNF8-216ENST00000573795 MROH1Q8NDA8 1641 aa34.87■■■■□ 3.17
SNF8-216ENST00000573795 ABCC3O15438 1527 aa34.86■■■■□ 3.17
SNF8-216ENST00000573795 ZC3H13Q5T200 1668 aaKnown RBP34.86■■■■□ 3.17
SNF8-216ENST00000573795 NLRP1Q9C000 1473 aa34.84■■■■□ 3.17
SNF8-216ENST00000573795 DISP3Q9P2K9 1392 aa34.8■■■■□ 3.16
SNF8-216ENST00000573795 SPATA31D1Q6ZQQ2 1576 aa34.79■■■■□ 3.16
SNF8-216ENST00000573795 UGGT1Q9NYU2 1555 aa34.79■■■■□ 3.16
SNF8-216ENST00000573795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.78■■■■□ 3.163e-6■□□□□ 10.3
SNF8-216ENST00000573795 CEP152O94986 1710 aa34.77■■■■□ 3.16
SNF8-216ENST00000573795 CROCC2H7BZ55 1655 aa34.76■■■■□ 3.16
SNF8-216ENST00000573795 DUOX2Q9NRD8 1548 aa34.75■■■■□ 3.15
SNF8-216ENST00000573795 DEPDC5O75140 1603 aa34.74■■■■□ 3.15
SNF8-216ENST00000573795 UBAP1LF5GYI3 381 aa34.74■■■■□ 3.15
SNF8-216ENST00000573795 ERVK-7P63135 1459 aa34.73■■■■□ 3.15
SNF8-216ENST00000573795 MED14O60244 1454 aa34.71■■■■□ 3.15
SNF8-216ENST00000573795 VWDEQ8N2E2 1590 aa34.71■■■■□ 3.15
SNF8-216ENST00000573795 PTPN23Q9H3S7 1636 aa34.71■■■■□ 3.15
SNF8-216ENST00000573795 ILDR2Q71H61 639 aa34.71■■■■□ 3.15
SNF8-216ENST00000573795 THEMISQ8N1K5 641 aaPredicted RBP34.71■■■■□ 3.15
SNF8-216ENST00000573795 SHANK2Q9UPX8 1470 aa34.71■■■■□ 3.15
SNF8-216ENST00000573795 ABCC5O15440 1437 aa34.7■■■■□ 3.15
SNF8-216ENST00000573795 CPS1P31327 1500 aa34.7■■■■□ 3.14
SNF8-216ENST00000573795 ANKLE2Q86XL3 938 aa34.69■■■■□ 3.14
SNF8-216ENST00000573795 PRDM15P57071 1507 aaPredicted RBP34.66■■■■□ 3.14
SNF8-216ENST00000573795 NPHP4O75161 1426 aaPredicted RBP34.66■■■■□ 3.14
SNF8-216ENST00000573795 CFAP65Q6ZU64 1925 aaKnown RBP34.65■■■■□ 3.14
SNF8-216ENST00000573795 KIF15Q9NS87 1388 aa34.64■■■■□ 3.14
SNF8-216ENST00000573795 IQGAP1P46940 1657 aa34.64■■■■□ 3.14
SNF8-216ENST00000573795 UBR1Q8IWV7 1749 aa34.62■■■■□ 3.13
SNF8-216ENST00000573795 ERBINQ96RT1 1412 aa34.62■■■■□ 3.13
SNF8-216ENST00000573795 DAPK1P53355 1430 aa34.6■■■■□ 3.13
SNF8-216ENST00000573795 FGD6Q6ZV73 1430 aa34.59■■■■□ 3.13
SNF8-216ENST00000573795 STRCP1A6NGW2 1772 aa34.57■■■■□ 3.12
SNF8-216ENST00000573795 ARHGAP31Q2M1Z3 1444 aa34.56■■■■□ 3.12
SNF8-216ENST00000573795 RRP7BPQ9NSQ0 103 aa34.55■■■■□ 3.12
SNF8-216ENST00000573795 ALKQ9UM73 1620 aa34.52■■■■□ 3.12
SNF8-216ENST00000573795 APLP2Q06481 763 aa34.52■■■■□ 3.12
SNF8-216ENST00000573795 ARHGAP23Q9P227 1491 aa34.48■■■■□ 3.11
SNF8-216ENST00000573795 SLIT1O75093 1534 aa34.47■■■■□ 3.11
SNF8-216ENST00000573795 SCAF11Q99590 1463 aaKnown RBP34.45■■■■□ 3.1
SNF8-216ENST00000573795 SOCS7O14512 581 aa34.44■■■■□ 3.1
SNF8-216ENST00000573795 TOM1O60784 492 aa34.44■■■■□ 3.1
SNF8-216ENST00000573795 PIP4K2BP78356 416 aa34.44■■■■□ 3.1
SNF8-216ENST00000573795 PIK3C2BO00750 1634 aa34.44■■■■□ 3.1
SNF8-216ENST00000573795 LMTK2Q8IWU2 1503 aa34.43■■■■□ 3.1
SNF8-216ENST00000573795 LRRC7Q96NW7 1537 aa34.43■■■■□ 3.1
SNF8-216ENST00000573795 SYNMO15061 1565 aa34.43■■■■□ 3.1
SNF8-216ENST00000573795 HSPA1LP34931 641 aa34.42■■■■□ 3.1
SNF8-216ENST00000573795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.42■■■■□ 3.11e-6■■■■□ 19.4
SNF8-216ENST00000573795 SCAF1Q9H7N4 1312 aaKnown RBP34.41■■■■□ 3.1
SNF8-216ENST00000573795 ANKRD30AQ9BXX3 1397 aa34.4■■■■□ 3.1
SNF8-216ENST00000573795 LTKP29376 864 aa34.4■■■■□ 3.1
SNF8-216ENST00000573795 CHIC2Q9UKJ5 165 aa34.4■■■■□ 3.1
SNF8-216ENST00000573795 ADGRL2O95490 1459 aa34.37■■■■□ 3.09
SNF8-216ENST00000573795 KANK1Q14678 1352 aa34.36■■■■□ 3.09
SNF8-216ENST00000573795 KDM5AP29375 1690 aaKnown RBP34.35■■■■□ 3.09
SNF8-216ENST00000573795 EFCAB6Q5THR3 1501 aa34.33■■■■□ 3.09
SNF8-216ENST00000573795 TXNDC2Q86VQ3 553 aa34.32■■■■□ 3.08
SNF8-216ENST00000573795 MED1Q15648 1581 aaPredicted RBP34.32■■■■□ 3.08
SNF8-216ENST00000573795 TMEM2Q9UHN6 1383 aa34.3■■■■□ 3.08
SNF8-216ENST00000573795 XIRP1Q702N8 1843 aaKnown RBP34.3■■■■□ 3.08
SNF8-216ENST00000573795 NOS1P29475 1434 aa34.28■■■■□ 3.08
SNF8-216ENST00000573795 IDI1Q13907 227 aa34.25■■■■□ 3.07
SNF8-216ENST00000573795 EID1Q9Y6B2 187 aa34.23■■■■□ 3.07
SNF8-216ENST00000573795 ADGRB3O60242 1522 aa34.21■■■■□ 3.07
SNF8-216ENST00000573795 FAM50AQ14320 339 aaKnown RBP34.2■■■■□ 3.07
SNF8-216ENST00000573795 ANKRD50Q9ULJ7 1429 aa34.19■■■■□ 3.06
SNF8-216ENST00000573795 TET3O43151 1660 aa34.19■■■■□ 3.06
SNF8-216ENST00000573795 STAG3Q9UJ98 1225 aa34.17■■■■□ 3.06
SNF8-216ENST00000573795 RPRD2Q5VT52 1461 aaKnown RBP34.14■■■■□ 3.06
SNF8-216ENST00000573795 UNC13BO14795 1591 aa34.11■■■■□ 3.05
SNF8-216ENST00000573795 MYO5BQ9ULV0 1848 aa34.1■■■■□ 3.05
SNF8-216ENST00000573795 GCC2Q8IWJ2 1684 aa34.09■■■■□ 3.05
SNF8-216ENST00000573795 SLC52A1Q9NWF4 448 aa34.08■■■■□ 3.05
SNF8-216ENST00000573795 SENP3Q9H4L4 574 aaPredicted RBP34.07■■■■□ 3.04
SNF8-216ENST00000573795 NWD1Q149M9 1564 aa34.06■■■■□ 3.04
SNF8-216ENST00000573795 SLC26A8Q96RN1 970 aa34.05■■■■□ 3.04
SNF8-216ENST00000573795 ZFYVE9O95405 1425 aa34.04■■■■□ 3.04
SNF8-216ENST00000573795 TMEM94Q12767 1356 aa34.03■■■■□ 3.04
SNF8-216ENST00000573795 KCNA6P17658 529 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms