RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 MAMSTRQ6ZN01 415 aa12.61□□□□□ -0.39
TOM1L1-216ENST00000573607 ZNF454Q8N9F8 522 aa12.61□□□□□ -0.39
TOM1L1-216ENST00000573607 RIMBP2O15034 1052 aa12.58□□□□□ -0.4
TOM1L1-216ENST00000573607 ZNF710Q8N1W2 664 aa12.58□□□□□ -0.4
TOM1L1-216ENST00000573607 IL27Q8NEV9 243 aa12.58□□□□□ -0.4
TOM1L1-216ENST00000573607 FBXW7Q969H0 707 aa12.58□□□□□ -0.4
TOM1L1-216ENST00000573607 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
TOM1L1-216ENST00000573607 ZSWIM6Q9HCJ5 1215 aa12.57□□□□□ -0.4
TOM1L1-216ENST00000573607 C6orf132Q5T0Z8 1188 aa12.56□□□□□ -0.4
TOM1L1-216ENST00000573607 ADAM33Q9BZ11 813 aa12.56□□□□□ -0.4
TOM1L1-216ENST00000573607 LHX6Q9UPM6 363 aa12.56□□□□□ -0.4
TOM1L1-216ENST00000573607 AMHR2Q16671 573 aa12.55□□□□□ -0.4
TOM1L1-216ENST00000573607 FAM161AQ3B820 660 aa12.54□□□□□ -0.4
TOM1L1-216ENST00000573607 PARP9Q8IXQ6 854 aa12.54□□□□□ -0.4
TOM1L1-216ENST00000573607 FAM117AQ9C073 453 aa12.52□□□□□ -0.41
TOM1L1-216ENST00000573607 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
TOM1L1-216ENST00000573607 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
TOM1L1-216ENST00000573607 PADI6Q6TGC4 694 aa12.5□□□□□ -0.41
TOM1L1-216ENST00000573607 PHOX2BQ99453 314 aa12.5□□□□□ -0.41
TOM1L1-216ENST00000573607 REPIN1Q9BWE0 567 aaKnown RBP12.5□□□□□ -0.41
TOM1L1-216ENST00000573607 TTLL12Q14166 644 aaPredicted RBP12.48□□□□□ -0.41
TOM1L1-216ENST00000573607 HOXB1P14653 301 aaPredicted RBP12.45□□□□□ -0.42
TOM1L1-216ENST00000573607 COL9A1P20849 921 aa12.45□□□□□ -0.42
TOM1L1-216ENST00000573607 NLRP7Q8WX94 980 aa12.45□□□□□ -0.42
TOM1L1-216ENST00000573607 PLEKHG3A1L390 1219 aa12.44□□□□□ -0.42
TOM1L1-216ENST00000573607 SNPHO15079 494 aa12.44□□□□□ -0.42
TOM1L1-216ENST00000573607 PPP4R3BQ5MIZ7 849 aa12.44□□□□□ -0.42
TOM1L1-216ENST00000573607 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
TOM1L1-216ENST00000573607 CERKQ8TCT0 537 aa12.44□□□□□ -0.42
TOM1L1-216ENST00000573607 MS4A1P11836 297 aa12.43□□□□□ -0.42
TOM1L1-216ENST00000573607 MDM2Q00987 491 aaPredicted RBP12.43□□□□□ -0.42
TOM1L1-216ENST00000573607 PRSS12P56730 875 aa12.42□□□□□ -0.42
TOM1L1-216ENST00000573607 TTC13Q8NBP0 860 aa12.42□□□□□ -0.42
TOM1L1-216ENST00000573607 FAM198AQ9UFP1 575 aa12.42□□□□□ -0.42
TOM1L1-216ENST00000573607 ADGRG1Q9Y653 693 aa12.42□□□□□ -0.42
TOM1L1-216ENST00000573607 METTL3Q86U44 580 aaKnown RBP12.41□□□□□ -0.42
TOM1L1-216ENST00000573607 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
TOM1L1-216ENST00000573607 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
TOM1L1-216ENST00000573607 BCL2L12Q9HB09 334 aa12.4□□□□□ -0.42
TOM1L1-216ENST00000573607 PXYLP1Q8TE99 480 aa12.39□□□□□ -0.43
TOM1L1-216ENST00000573607 LHX8Q68G74 356 aa12.38□□□□□ -0.43
TOM1L1-216ENST00000573607 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
TOM1L1-216ENST00000573607 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
TOM1L1-216ENST00000573607 OATP04181 439 aa12.37□□□□□ -0.43
TOM1L1-216ENST00000573607 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
TOM1L1-216ENST00000573607 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
TOM1L1-216ENST00000573607 CLCN1P35523 988 aa12.36□□□□□ -0.43
TOM1L1-216ENST00000573607 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
TOM1L1-216ENST00000573607 TSKSQ9UJT2 592 aa12.36□□□□□ -0.43
TOM1L1-216ENST00000573607 PTPREP23469 700 aa12.35□□□□□ -0.43
TOM1L1-216ENST00000573607 DAXXQ9UER7 740 aaPredicted RBP12.35□□□□□ -0.43
TOM1L1-216ENST00000573607 PPP1R3GB7ZBB8 358 aa12.34□□□□□ -0.43
TOM1L1-216ENST00000573607 SSTR3P32745 418 aaPredicted RBP12.33□□□□□ -0.44
TOM1L1-216ENST00000573607 C14orf37Q86TY3 774 aa12.32□□□□□ -0.44
TOM1L1-216ENST00000573607 KCNK17Q96T54 332 aa12.31□□□□□ -0.44
TOM1L1-216ENST00000573607 PROX2Q3B8N5 592 aa12.3□□□□□ -0.44
TOM1L1-216ENST00000573607 RBM46Q8TBY0 533 aaKnown RBP12.3□□□□□ -0.44
TOM1L1-216ENST00000573607 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
TOM1L1-216ENST00000573607 NUDT18Q6ZVK8 323 aa12.29□□□□□ -0.44
TOM1L1-216ENST00000573607 EYA1Q99502 592 aa12.29□□□□□ -0.44
TOM1L1-216ENST00000573607 RCCD1A6NED2 376 aa12.27□□□□□ -0.45
TOM1L1-216ENST00000573607 TRIM6-TRIM34B2RNG4 842 aa12.27□□□□□ -0.45
TOM1L1-216ENST00000573607 PSEN2P49810 448 aa12.27□□□□□ -0.45
TOM1L1-216ENST00000573607 SMAPO00193 183 aa12.26□□□□□ -0.45
TOM1L1-216ENST00000573607 ST18O60284 1047 aa12.26□□□□□ -0.45
TOM1L1-216ENST00000573607 VARS2Q5ST30 1063 aaKnown RBP12.26□□□□□ -0.45
TOM1L1-216ENST00000573607 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
TOM1L1-216ENST00000573607 PNMA3Q9UL41 463 aa12.26□□□□□ -0.45
TOM1L1-216ENST00000573607 POTEEQ6S8J3 1075 aa12.25□□□□□ -0.45
TOM1L1-216ENST00000573607 TATDN2Q93075 761 aa12.25□□□□□ -0.45
TOM1L1-216ENST00000573607 ERBB3P21860 1342 aa12.25□□□□□ -0.45
TOM1L1-216ENST00000573607 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
TOM1L1-216ENST00000573607 AXIN2Q9Y2T1 843 aa12.23□□□□□ -0.45
TOM1L1-216ENST00000573607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
TOM1L1-216ENST00000573607 PACS2Q86VP3 889 aa12.22□□□□□ -0.45
TOM1L1-216ENST00000573607 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
TOM1L1-216ENST00000573607 NBPF26B4DH59 902 aa12.21□□□□□ -0.45
TOM1L1-216ENST00000573607 ERICH6Q7L0X2 663 aa12.21□□□□□ -0.45
TOM1L1-216ENST00000573607 DMRTA1Q5VZB9 504 aa12.2□□□□□ -0.46
TOM1L1-216ENST00000573607 GOPCQ9HD26 462 aa12.2□□□□□ -0.46
TOM1L1-216ENST00000573607 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
TOM1L1-216ENST00000573607 EMP3P54852 163 aa12.19□□□□□ -0.46
TOM1L1-216ENST00000573607 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
TOM1L1-216ENST00000573607 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
TOM1L1-216ENST00000573607 DNAJB2P25686 324 aa12.17□□□□□ -0.46
TOM1L1-216ENST00000573607 KCNH8Q96L42 1107 aa12.17□□□□□ -0.46
TOM1L1-216ENST00000573607 PCMTD1Q96MG8 357 aaPredicted RBP12.17□□□□□ -0.46
TOM1L1-216ENST00000573607 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
TOM1L1-216ENST00000573607 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
TOM1L1-216ENST00000573607 PROCA1Q8NCQ7 364 aaPredicted RBP12.16□□□□□ -0.46
TOM1L1-216ENST00000573607 POLR3EQ9NVU0 708 aa12.16□□□□□ -0.46
TOM1L1-216ENST00000573607 DDX11L8A8MPP1 907 aa12.15□□□□□ -0.46
TOM1L1-216ENST00000573607 FAM163AQ96GL9 167 aaPredicted RBP12.15□□□□□ -0.46
TOM1L1-216ENST00000573607 TMEM134Q9H6X4 195 aa12.15□□□□□ -0.46
TOM1L1-216ENST00000573607 POTEB3A0JP26 581 aa12.14□□□□□ -0.47
TOM1L1-216ENST00000573607 SKIV2LQ15477 1246 aaKnown RBP12.14□□□□□ -0.47
TOM1L1-216ENST00000573607 MYSM1Q5VVJ2 828 aa12.14□□□□□ -0.47
TOM1L1-216ENST00000573607 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
TOM1L1-216ENST00000573607 TBC1D2Q9BYX2 928 aa12.14□□□□□ -0.47
TOM1L1-216ENST00000573607 CD46P15529 392 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms