RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 PSEN2P49810 448 aa11.46□□□□□ -0.57
CDC27-215ENST00000573550 TSR1Q2NL82 804 aaKnown RBP11.46□□□□□ -0.57
CDC27-215ENST00000573550 PTPREP23469 700 aa11.45□□□□□ -0.58
CDC27-215ENST00000573550 C6orf132Q5T0Z8 1188 aa11.45□□□□□ -0.58
CDC27-215ENST00000573550 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
CDC27-215ENST00000573550 SMYD5Q6GMV2 418 aa11.44□□□□□ -0.58
CDC27-215ENST00000573550 CDHR5Q9HBB8 845 aa11.43□□□□□ -0.58
CDC27-215ENST00000573550 PCDH10Q9P2E7 1040 aa11.43□□□□□ -0.58
CDC27-215ENST00000573550 RBM26Q5T8P6 1007 aaKnown RBP11.42□□□□□ -0.58
CDC27-215ENST00000573550 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
CDC27-215ENST00000573550 BCANQ96GW7 911 aa11.42□□□□□ -0.58
CDC27-215ENST00000573550 COL9A1P20849 921 aa11.41□□□□□ -0.58
CDC27-215ENST00000573550 PPP1R3GB7ZBB8 358 aa11.4□□□□□ -0.58
CDC27-215ENST00000573550 KCNH8Q96L42 1107 aa11.4□□□□□ -0.58
CDC27-215ENST00000573550 LSM11P83369 360 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDC27-215ENST00000573550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDC27-215ENST00000573550 TULP1O00294 542 aaPredicted RBP11.37□□□□□ -0.59
CDC27-215ENST00000573550 NPDC1Q9NQX5 325 aaPredicted RBP11.37□□□□□ -0.59
CDC27-215ENST00000573550 ZBED2Q9BTP6 218 aa11.36□□□□□ -0.59
CDC27-215ENST00000573550 PTGDRQ13258 359 aa11.35□□□□□ -0.59
CDC27-215ENST00000573550 GPR37O15354 613 aa11.34□□□□□ -0.59
CDC27-215ENST00000573550 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
CDC27-215ENST00000573550 NUTM2FA1L443 756 aa11.33□□□□□ -0.6
CDC27-215ENST00000573550 TK2O00142 265 aa11.33□□□□□ -0.6
CDC27-215ENST00000573550 LMOD2Q6P5Q4 547 aa11.33□□□□□ -0.6
CDC27-215ENST00000573550 CERKQ8TCT0 537 aa11.33□□□□□ -0.6
CDC27-215ENST00000573550 PROX2Q3B8N5 592 aa11.32□□□□□ -0.6
CDC27-215ENST00000573550 ADGRD1Q6QNK2 874 aa11.32□□□□□ -0.6
CDC27-215ENST00000573550 ANKRD13DQ6ZTN6 518 aa11.32□□□□□ -0.6
CDC27-215ENST00000573550 VPS9D1Q9Y2B5 631 aa11.32□□□□□ -0.6
CDC27-215ENST00000573550 GPIHBP1Q8IV16 184 aa11.31□□□□□ -0.6
CDC27-215ENST00000573550 RBM27Q9P2N5 1060 aaKnown RBP11.29□□□□□ -0.6
CDC27-215ENST00000573550 TRIM6-TRIM34B2RNG4 842 aa11.28□□□□□ -0.6
CDC27-215ENST00000573550 FCHSD2O94868 740 aa11.28□□□□□ -0.6
CDC27-215ENST00000573550 PRSS12P56730 875 aa11.28□□□□□ -0.6
CDC27-215ENST00000573550 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
CDC27-215ENST00000573550 TSKSQ9UJT2 592 aa11.28□□□□□ -0.6
CDC27-215ENST00000573550 HRO43593 1189 aa11.27□□□□□ -0.61
CDC27-215ENST00000573550 FAM198AQ9UFP1 575 aa11.27□□□□□ -0.61
CDC27-215ENST00000573550 ONECUT3O60422 494 aaPredicted RBP11.26□□□□□ -0.61
CDC27-215ENST00000573550 TTC13Q8NBP0 860 aa11.26□□□□□ -0.61
CDC27-215ENST00000573550 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
CDC27-215ENST00000573550 HIC1Q14526 733 aa11.25□□□□□ -0.61
CDC27-215ENST00000573550 PADI6Q6TGC4 694 aa11.25□□□□□ -0.61
CDC27-215ENST00000573550 RABGEF1Q9UJ41 708 aa11.25□□□□□ -0.61
CDC27-215ENST00000573550 KIAA1468Q9P260 1216 aa11.23□□□□□ -0.61
CDC27-215ENST00000573550 GNPATO15228 680 aa11.22□□□□□ -0.61
CDC27-215ENST00000573550 SPNS2Q8IVW8 549 aa11.22□□□□□ -0.61
CDC27-215ENST00000573550 C3orf80F5H4A9 247 aa11.21□□□□□ -0.61
CDC27-215ENST00000573550 FECHP22830 423 aa11.21□□□□□ -0.61
CDC27-215ENST00000573550 ZC3H15Q8WU90 426 aaKnown RBP11.2□□□□□ -0.62
CDC27-215ENST00000573550 PACS2Q86VP3 889 aa11.19□□□□□ -0.62
CDC27-215ENST00000573550 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
CDC27-215ENST00000573550 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
CDC27-215ENST00000573550 SEPT9Q9UHD8 586 aaPredicted RBP11.16□□□□□ -0.62
CDC27-215ENST00000573550 ZMYND10O75800 440 aa11.15□□□□□ -0.62
CDC27-215ENST00000573550 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
CDC27-215ENST00000573550 TATDN2Q93075 761 aa11.15□□□□□ -0.62
CDC27-215ENST00000573550 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.62
CDC27-215ENST00000573550 SMAPO00193 183 aa11.14□□□□□ -0.63
CDC27-215ENST00000573550 FAM161AQ3B820 660 aa11.14□□□□□ -0.63
CDC27-215ENST00000573550 NUDT18Q6ZVK8 323 aa11.14□□□□□ -0.63
CDC27-215ENST00000573550 LAPTM4BQ86VI4 370 aa11.14□□□□□ -0.63
CDC27-215ENST00000573550 PNMA3Q9UL41 463 aa11.14□□□□□ -0.63
CDC27-215ENST00000573550 EYA1Q99502 592 aa11.13□□□□□ -0.63
CDC27-215ENST00000573550 MYT1LQ9UL68 1186 aa11.13□□□□□ -0.63
CDC27-215ENST00000573550 MAP2K5Q13163 448 aa11.12□□□□□ -0.63
CDC27-215ENST00000573550 FAM98CQ17RN3 349 aaKnown RBP11.12□□□□□ -0.63
CDC27-215ENST00000573550 BARGINQ6ZT62 677 aa11.12□□□□□ -0.63
CDC27-215ENST00000573550 MMRN1Q13201 1228 aa11.11□□□□□ -0.63
CDC27-215ENST00000573550 STAC3Q96MF2 364 aa11.11□□□□□ -0.63
CDC27-215ENST00000573550 ZFRQ96KR1 1074 aaKnown RBP11.09□□□□□ -0.63
CDC27-215ENST00000573550 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
CDC27-215ENST00000573550 METTL3Q86U44 580 aaKnown RBP11.08□□□□□ -0.64
CDC27-215ENST00000573550 RBM46Q8TBY0 533 aaKnown RBP11.08□□□□□ -0.64
CDC27-215ENST00000573550 PXYLP1Q8TE99 480 aa11.08□□□□□ -0.64
CDC27-215ENST00000573550 IRF6O14896 467 aa11.07□□□□□ -0.64
CDC27-215ENST00000573550 OATP04181 439 aa11.07□□□□□ -0.64
CDC27-215ENST00000573550 CCDC102AQ96A19 550 aa11.06□□□□□ -0.64
CDC27-215ENST00000573550 RNF166Q96A37 237 aaPredicted RBP11.06□□□□□ -0.64
CDC27-215ENST00000573550 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
CDC27-215ENST00000573550 GOLGA8CPA6NN73 597 aa11.04□□□□□ -0.64
CDC27-215ENST00000573550 WNT2BQ93097 391 aa11.04□□□□□ -0.64
CDC27-215ENST00000573550 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
CDC27-215ENST00000573550 RCCD1A6NED2 376 aa11.03□□□□□ -0.64
CDC27-215ENST00000573550 ANKK1Q8NFD2 765 aa11.03□□□□□ -0.64
CDC27-215ENST00000573550 DNAJB2P25686 324 aa11.02□□□□□ -0.65
CDC27-215ENST00000573550 KRI1Q8N9T8 703 aaKnown RBP11.02□□□□□ -0.65
CDC27-215ENST00000573550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.01□□□□□ -0.65
CDC27-215ENST00000573550 THSD4Q6ZMP0 1018 aa11.01□□□□□ -0.65
CDC27-215ENST00000573550 SAMD7Q7Z3H4 446 aa11.01□□□□□ -0.65
CDC27-215ENST00000573550 TMEM134Q9H6X4 195 aa11.01□□□□□ -0.65
CDC27-215ENST00000573550 SOWAHBA6NEL2 793 aa11□□□□□ -0.65
CDC27-215ENST00000573550 BCAMP50895 628 aa10.99□□□□□ -0.65
CDC27-215ENST00000573550 SWT1Q5T5J6 900 aaKnown RBP10.99□□□□□ -0.65
CDC27-215ENST00000573550 NLRP7Q8WX94 980 aa10.99□□□□□ -0.65
CDC27-215ENST00000573550 LRCH3Q96II8 777 aa10.98□□□□□ -0.65
CDC27-215ENST00000573550 SLC24A3Q9HC58 644 aa10.98□□□□□ -0.65
CDC27-215ENST00000573550 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
CDC27-215ENST00000573550 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms