RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 TYW1BQ6NUM6 668 aa10.41□□□□□ -0.74
ERCC4-204ENST00000573018 RGS20O76081 388 aa10.39□□□□□ -0.75
ERCC4-204ENST00000573018 PHF14O94880 888 aa10.39□□□□□ -0.75
ERCC4-204ENST00000573018 IRX2Q9BZI1 471 aaPredicted RBP10.39□□□□□ -0.75
ERCC4-204ENST00000573018 FBXW7Q969H0 707 aa10.38□□□□□ -0.75
ERCC4-204ENST00000573018 KIAA1468Q9P260 1216 aa10.38□□□□□ -0.75
ERCC4-204ENST00000573018 DPYSL4O14531 572 aa10.36□□□□□ -0.75
ERCC4-204ENST00000573018 SEPT9Q9UHD8 586 aaPredicted RBP10.35□□□□□ -0.75
ERCC4-204ENST00000573018 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
ERCC4-204ENST00000573018 C6orf132Q5T0Z8 1188 aa10.34□□□□□ -0.75
ERCC4-204ENST00000573018 RBM33Q96EV2 1170 aaKnown RBP10.34□□□□□ -0.75
ERCC4-204ENST00000573018 ZFRQ96KR1 1074 aaKnown RBP10.34□□□□□ -0.75
ERCC4-204ENST00000573018 LAPTM4BQ86VI4 370 aa10.33□□□□□ -0.76
ERCC4-204ENST00000573018 WBP1LQ9NX94 342 aa10.32□□□□□ -0.76
ERCC4-204ENST00000573018 ITGBL1O95965 494 aaPredicted RBP10.31□□□□□ -0.76
ERCC4-204ENST00000573018 CAMK2BQ13554 666 aa10.31□□□□□ -0.76
ERCC4-204ENST00000573018 DDX12PQ92771 950 aa10.31□□□□□ -0.76
ERCC4-204ENST00000573018 EPAS1Q99814 870 aa10.31□□□□□ -0.76
ERCC4-204ENST00000573018 TRIM6-TRIM34B2RNG4 842 aa10.29□□□□□ -0.76
ERCC4-204ENST00000573018 ONECUT3O60422 494 aaPredicted RBP10.27□□□□□ -0.77
ERCC4-204ENST00000573018 FAM98CQ17RN3 349 aaKnown RBP10.25□□□□□ -0.77
ERCC4-204ENST00000573018 NYAP1Q6ZVC0 841 aa10.25□□□□□ -0.77
ERCC4-204ENST00000573018 KCNC4Q03721 635 aa10.24□□□□□ -0.77
ERCC4-204ENST00000573018 NBR1Q14596 966 aa10.24□□□□□ -0.77
ERCC4-204ENST00000573018 TSR1Q2NL82 804 aaKnown RBP10.24□□□□□ -0.77
ERCC4-204ENST00000573018 LRCH3Q96II8 777 aa10.24□□□□□ -0.77
ERCC4-204ENST00000573018 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.24□□□□□ -0.77
ERCC4-204ENST00000573018 HPS5Q9UPZ3 1129 aa10.24□□□□□ -0.77
ERCC4-204ENST00000573018 MAP3K7O43318 606 aa10.22□□□□□ -0.77
ERCC4-204ENST00000573018 TSR3Q9UJK0 312 aaKnown RBP10.22□□□□□ -0.77
ERCC4-204ENST00000573018 TSKSQ9UJT2 592 aa10.21□□□□□ -0.77
ERCC4-204ENST00000573018 EN1Q05925 392 aaPredicted RBP10.2□□□□□ -0.78
ERCC4-204ENST00000573018 Q6ZNB5 142 aa10.19□□□□□ -0.78
ERCC4-204ENST00000573018 PACS2Q86VP3 889 aa10.18□□□□□ -0.78
ERCC4-204ENST00000573018 SMAPO00193 183 aa10.17□□□□□ -0.78
ERCC4-204ENST00000573018 PDIA6Q15084 440 aa10.16□□□□□ -0.78
ERCC4-204ENST00000573018 PPP4CP60510 307 aa10.15□□□□□ -0.78
ERCC4-204ENST00000573018 BBXQ8WY36 941 aaPredicted RBP10.14□□□□□ -0.79
ERCC4-204ENST00000573018 PRIM1P49642 420 aaKnown RBP10.13□□□□□ -0.79
ERCC4-204ENST00000573018 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
ERCC4-204ENST00000573018 CDCA7LQ96GN5 454 aa10.13□□□□□ -0.79
ERCC4-204ENST00000573018 FAM198AQ9UFP1 575 aa10.12□□□□□ -0.79
ERCC4-204ENST00000573018 GRXCR2A6NFK2 248 aa10.11□□□□□ -0.79
ERCC4-204ENST00000573018 C3orf80F5H4A9 247 aa10.11□□□□□ -0.79
ERCC4-204ENST00000573018 PRSS12P56730 875 aa10.11□□□□□ -0.79
ERCC4-204ENST00000573018 SPDYE16A6NNV3 312 aaPredicted RBP10.1□□□□□ -0.79
ERCC4-204ENST00000573018 TJAP1Q5JTD0 557 aa10.08□□□□□ -0.8
ERCC4-204ENST00000573018 PNMA3Q9UL41 463 aa10.08□□□□□ -0.8
ERCC4-204ENST00000573018 RNF40O75150 1001 aa10.07□□□□□ -0.8
ERCC4-204ENST00000573018 E2F4Q16254 413 aa10.07□□□□□ -0.8
ERCC4-204ENST00000573018 TATDN2Q93075 761 aa10.07□□□□□ -0.8
ERCC4-204ENST00000573018 CDHR5Q9HBB8 845 aa10.07□□□□□ -0.8
ERCC4-204ENST00000573018 SPRYD3Q8NCJ5 442 aa10.06□□□□□ -0.8
ERCC4-204ENST00000573018 MTRQ99707 1265 aa10.06□□□□□ -0.8
ERCC4-204ENST00000573018 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
ERCC4-204ENST00000573018 GFRA3O60609 400 aa10.05□□□□□ -0.8
ERCC4-204ENST00000573018 CERKQ8TCT0 537 aa10.05□□□□□ -0.8
ERCC4-204ENST00000573018 NUDT18Q6ZVK8 323 aa10.04□□□□□ -0.8
ERCC4-204ENST00000573018 PRKD2Q9BZL6 878 aa10.04□□□□□ -0.8
ERCC4-204ENST00000573018 IL21Q9HBE4 155 aa10.03□□□□□ -0.8
ERCC4-204ENST00000573018 LCE2BO14633 110 aa10.02□□□□□ -0.81
ERCC4-204ENST00000573018 LAPTM4AQ15012 233 aa10.02□□□□□ -0.81
ERCC4-204ENST00000573018 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
ERCC4-204ENST00000573018 ZNF516Q92618 1163 aa10.02□□□□□ -0.81
ERCC4-204ENST00000573018 WDR70Q9NW82 654 aa10.02□□□□□ -0.81
ERCC4-204ENST00000573018 OSBPP22059 807 aa10.01□□□□□ -0.81
ERCC4-204ENST00000573018 APLP1P51693 650 aa10□□□□□ -0.81
ERCC4-204ENST00000573018 ZBTB4Q9P1Z0 1013 aaPredicted RBP10□□□□□ -0.81
ERCC4-204ENST00000573018 CFAP44Q96MT7 982 aa9.99□□□□□ -0.81
ERCC4-204ENST00000573018 HDGFP51858 240 aaKnown RBP9.98□□□□□ -0.81
ERCC4-204ENST00000573018 TRAF7Q6Q0C0 670 aa9.98□□□□□ -0.81
ERCC4-204ENST00000573018 ARIH1Q9Y4X5 557 aaPredicted RBP9.98□□□□□ -0.81
ERCC4-204ENST00000573018 PAXIP1Q6ZW49 1069 aaPredicted RBP9.97□□□□□ -0.81
ERCC4-204ENST00000573018 NKX2-3Q8TAU0 364 aa9.97□□□□□ -0.81
ERCC4-204ENST00000573018 COPS2P61201 443 aa9.96□□□□□ -0.82
ERCC4-204ENST00000573018 PADI6Q6TGC4 694 aa9.96□□□□□ -0.82
ERCC4-204ENST00000573018 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.96□□□□□ -0.82
ERCC4-204ENST00000573018 SWT1Q5T5J6 900 aaKnown RBP9.95□□□□□ -0.82
ERCC4-204ENST00000573018 RBM27Q9P2N5 1060 aaKnown RBP9.95□□□□□ -0.82
ERCC4-204ENST00000573018 NRG2O14511 850 aaPredicted RBP9.94□□□□□ -0.82
ERCC4-204ENST00000573018 TTC13Q8NBP0 860 aa9.92□□□□□ -0.82
ERCC4-204ENST00000573018 NPDC1Q9NQX5 325 aaPredicted RBP9.92□□□□□ -0.82
ERCC4-204ENST00000573018 V9GY48 417 aaPredicted RBP9.92□□□□□ -0.82
ERCC4-204ENST00000573018 SLF2Q8IX21 1173 aa9.9□□□□□ -0.82
ERCC4-204ENST00000573018 PDZRN3Q9UPQ7 1066 aa9.88□□□□□ -0.83
ERCC4-204ENST00000573018 NECTIN2Q92692 538 aa9.87□□□□□ -0.83
ERCC4-204ENST00000573018 GGCXP38435 758 aa9.86□□□□□ -0.83
ERCC4-204ENST00000573018 EYA1Q99502 592 aa9.85□□□□□ -0.83
ERCC4-204ENST00000573018 ZPR1O75312 459 aa9.84□□□□□ -0.83
ERCC4-204ENST00000573018 SLC4A3P48751 1232 aa9.84□□□□□ -0.83
ERCC4-204ENST00000573018 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
ERCC4-204ENST00000573018 MLLT3P42568 568 aaPredicted RBP9.83□□□□□ -0.84
ERCC4-204ENST00000573018 BLOC1S3Q6QNY0 202 aa9.82□□□□□ -0.84
ERCC4-204ENST00000573018 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
ERCC4-204ENST00000573018 TLL1O43897 1013 aa9.8□□□□□ -0.84
ERCC4-204ENST00000573018 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
ERCC4-204ENST00000573018 RNF223E7ERA6 249 aa9.79□□□□□ -0.84
ERCC4-204ENST00000573018 PRR14Q9BWN1 585 aa9.79□□□□□ -0.84
ERCC4-204ENST00000573018 DNAJB2P25686 324 aa9.77□□□□□ -0.85
ERCC4-204ENST00000573018 SLC19A1P41440 591 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms