RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 DNMT1P26358 1616 aaKnown RBP18.45■□□□□ 0.54
NDE1-206ENST00000572967 MROH1Q8NDA8 1641 aa18.43■□□□□ 0.54
NDE1-206ENST00000572967 KIF3BO15066 747 aa18.43■□□□□ 0.54
NDE1-206ENST00000572967 APLP2Q06481 763 aa18.42■□□□□ 0.54
NDE1-206ENST00000572967 RSPH4AQ5TD94 716 aa18.42■□□□□ 0.54
NDE1-206ENST00000572967 SHANK2Q9UPX8 1470 aa18.41■□□□□ 0.54
NDE1-206ENST00000572967 FBXO41Q8TF61 875 aa18.41■□□□□ 0.54
NDE1-206ENST00000572967 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
NDE1-206ENST00000572967 POLR1AO95602 1720 aaPredicted RBP18.4■□□□□ 0.54
NDE1-206ENST00000572967 PZPP20742 1482 aa18.4■□□□□ 0.54
NDE1-206ENST00000572967 TSPY4P0CV99 314 aa18.4■□□□□ 0.54
NDE1-206ENST00000572967 TSPY10P0CW01 314 aa18.4■□□□□ 0.54
NDE1-206ENST00000572967 TCOF1Q13428 1488 aaKnown RBP18.39■□□□□ 0.53
NDE1-206ENST00000572967 ABCC3O15438 1527 aa18.39■□□□□ 0.53
NDE1-206ENST00000572967 DUOX2Q9NRD8 1548 aa18.39■□□□□ 0.53
NDE1-206ENST00000572967 PTPRTO14522 1441 aa18.38■□□□□ 0.53
NDE1-206ENST00000572967 DAPK1P53355 1430 aa18.37■□□□□ 0.53
NDE1-206ENST00000572967 A2ML1A8K2U0 1454 aa18.36■□□□□ 0.53
NDE1-206ENST00000572967 PLA2R1Q13018 1463 aa18.36■□□□□ 0.53
NDE1-206ENST00000572967 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
NDE1-206ENST00000572967 PRDM15P57071 1507 aaPredicted RBP18.35■□□□□ 0.53
NDE1-206ENST00000572967 ABCC5O15440 1437 aa18.35■□□□□ 0.53
NDE1-206ENST00000572967 TNRQ92752 1358 aa18.34■□□□□ 0.53
NDE1-206ENST00000572967 DEPDC5O75140 1603 aa18.34■□□□□ 0.53
NDE1-206ENST00000572967 KIF15Q9NS87 1388 aa18.33■□□□□ 0.53
NDE1-206ENST00000572967 CERKQ8TCT0 537 aa18.33■□□□□ 0.52
NDE1-206ENST00000572967 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
NDE1-206ENST00000572967 WASHC2CQ9Y4E1 1318 aa18.32■□□□□ 0.52
NDE1-206ENST00000572967 LTBP4Q8N2S1 1624 aa18.32■□□□□ 0.52
NDE1-206ENST00000572967 SPATA31D1Q6ZQQ2 1576 aa18.31■□□□□ 0.52
NDE1-206ENST00000572967 NEURL4Q96JN8 1562 aa18.31■□□□□ 0.52
NDE1-206ENST00000572967 CFAP65Q6ZU64 1925 aaKnown RBP18.31■□□□□ 0.52
NDE1-206ENST00000572967 ERBINQ96RT1 1412 aa18.31■□□□□ 0.52
NDE1-206ENST00000572967 FBXO31Q5XUX0 539 aaPredicted RBP18.3■□□□□ 0.52
NDE1-206ENST00000572967 NCKAP5LQ9HCH0 1330 aa18.29■□□□□ 0.52
NDE1-206ENST00000572967 ERVK-7P63135 1459 aa18.28■□□□□ 0.52
NDE1-206ENST00000572967 NLRP1Q9C000 1473 aa18.27■□□□□ 0.52
NDE1-206ENST00000572967 UGGT1Q9NYU2 1555 aa18.27■□□□□ 0.52
NDE1-206ENST00000572967 UBR1Q8IWV7 1749 aa18.24■□□□□ 0.51
NDE1-206ENST00000572967 RRP7BPQ9NSQ0 103 aa18.24■□□□□ 0.51
NDE1-206ENST00000572967 ADGRL2O95490 1459 aa18.23■□□□□ 0.51
NDE1-206ENST00000572967 IQGAP1P46940 1657 aa18.22■□□□□ 0.51
NDE1-206ENST00000572967 ANKRD30AQ9BXX3 1397 aa18.22■□□□□ 0.51
NDE1-206ENST00000572967 CHIC2Q9UKJ5 165 aa18.22■□□□□ 0.51
NDE1-206ENST00000572967 ZNF335Q9H4Z2 1342 aaPredicted RBP18.22■□□□□ 0.51
NDE1-206ENST00000572967 PKD2Q13563 968 aa18.21■□□□□ 0.51
NDE1-206ENST00000572967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.2■□□□□ 0.5
NDE1-206ENST00000572967 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
NDE1-206ENST00000572967 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
NDE1-206ENST00000572967 IQSEC2Q5JU85 1478 aa18.2■□□□□ 0.5
NDE1-206ENST00000572967 PIK3C2BO00750 1634 aa18.19■□□□□ 0.5
NDE1-206ENST00000572967 EFCAB6Q5THR3 1501 aa18.18■□□□□ 0.5
NDE1-206ENST00000572967 LMTK2Q8IWU2 1503 aa18.17■□□□□ 0.5
NDE1-206ENST00000572967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.16■□□□□ 0.55e-12■□□□□ 9.3
NDE1-206ENST00000572967 KANK1Q14678 1352 aa18.16■□□□□ 0.5
NDE1-206ENST00000572967 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
NDE1-206ENST00000572967 SYNMO15061 1565 aa18.15■□□□□ 0.5
NDE1-206ENST00000572967 UNC13BO14795 1591 aa18.14■□□□□ 0.49
NDE1-206ENST00000572967 GCC2Q8IWJ2 1684 aa18.13■□□□□ 0.49
NDE1-206ENST00000572967 NPHP4O75161 1426 aaPredicted RBP18.13■□□□□ 0.49
NDE1-206ENST00000572967 TET3O43151 1660 aa18.12■□□□□ 0.49
NDE1-206ENST00000572967 MED14O60244 1454 aa18.12■□□□□ 0.49
NDE1-206ENST00000572967 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
NDE1-206ENST00000572967 ANKRD50Q9ULJ7 1429 aa18.11■□□□□ 0.49
NDE1-206ENST00000572967 CPS1P31327 1500 aa18.11■□□□□ 0.49
NDE1-206ENST00000572967 KDM5AP29375 1690 aaKnown RBP18.1■□□□□ 0.49
NDE1-206ENST00000572967 THEMISQ8N1K5 641 aaPredicted RBP18.1■□□□□ 0.49
NDE1-206ENST00000572967 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
NDE1-206ENST00000572967 ADGRB3O60242 1522 aa18.08■□□□□ 0.49
NDE1-206ENST00000572967 SLIT1O75093 1534 aa18.08■□□□□ 0.49
NDE1-206ENST00000572967 SCAF11Q99590 1463 aaKnown RBP18.08■□□□□ 0.49
NDE1-206ENST00000572967 MYO5BQ9ULV0 1848 aa18.08■□□□□ 0.48
NDE1-206ENST00000572967 ANKLE2Q86XL3 938 aa18.08■□□□□ 0.48
NDE1-206ENST00000572967 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
NDE1-206ENST00000572967 IQGAP3Q86VI3 1631 aa18.06■□□□□ 0.48
NDE1-206ENST00000572967 E9PCH4 1651 aa18.06■□□□□ 0.48
NDE1-206ENST00000572967 NOS1P29475 1434 aa18.03■□□□□ 0.48
NDE1-206ENST00000572967 RPRD2Q5VT52 1461 aaKnown RBP18.02■□□□□ 0.48
NDE1-206ENST00000572967 ITGAEP38570 1179 aa18.01■□□□□ 0.47
NDE1-206ENST00000572967 ROCK1Q13464 1354 aa18.01■□□□□ 0.47
NDE1-206ENST00000572967 UBAP1LF5GYI3 381 aa18■□□□□ 0.47
NDE1-206ENST00000572967 XIRP1Q702N8 1843 aaKnown RBP17.98■□□□□ 0.47
NDE1-206ENST00000572967 STAG3Q9UJ98 1225 aa17.98■□□□□ 0.47
NDE1-206ENST00000572967 TMEM2Q9UHN6 1383 aa17.98■□□□□ 0.47
NDE1-206ENST00000572967 ALKQ9UM73 1620 aa17.98■□□□□ 0.47
NDE1-206ENST00000572967 TMEM131LA2VDJ0 1609 aa17.97■□□□□ 0.47
NDE1-206ENST00000572967 LTKP29376 864 aa17.96■□□□□ 0.47
NDE1-206ENST00000572967 LRRC7Q96NW7 1537 aa17.96■□□□□ 0.47
NDE1-206ENST00000572967 SPHKAPQ2M3C7 1700 aa17.95■□□□□ 0.46
NDE1-206ENST00000572967 RRBP1Q9P2E9 1410 aaKnown RBP17.95■□□□□ 0.46
NDE1-206ENST00000572967 IDI1Q13907 227 aa17.94■□□□□ 0.46
NDE1-206ENST00000572967 TXNDC2Q86VQ3 553 aa17.94■□□□□ 0.46
NDE1-206ENST00000572967 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
NDE1-206ENST00000572967 EID1Q9Y6B2 187 aa17.93■□□□□ 0.46
NDE1-206ENST00000572967 NWD1Q149M9 1564 aa17.91■□□□□ 0.46
NDE1-206ENST00000572967 PIP4K2BP78356 416 aa17.9■□□□□ 0.46
NDE1-206ENST00000572967 DISP3Q9P2K9 1392 aa17.9■□□□□ 0.46
NDE1-206ENST00000572967 ZFYVE9O95405 1425 aa17.89■□□□□ 0.45
NDE1-206ENST00000572967 NUP155O75694 1391 aa17.88■□□□□ 0.45
NDE1-206ENST00000572967 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms