RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 PLA2R1Q13018 1463 aa22.59■■□□□ 1.21
POLR2A-201ENST00000572844 SUPT16HQ9Y5B9 1047 aaKnown RBP22.59■■□□□ 1.21
POLR2A-201ENST00000572844 ZFYVE16Q7Z3T8 1539 aa22.57■■□□□ 1.2
POLR2A-201ENST00000572844 TRPM1Q7Z4N2 1603 aa22.57■■□□□ 1.2
POLR2A-201ENST00000572844 PRKRIP1Q9H875 184 aaPredicted RBP22.56■■□□□ 1.2
POLR2A-201ENST00000572844 LAMC1P11047 1609 aa22.55■■□□□ 1.2
POLR2A-201ENST00000572844 ZNF326Q5BKZ1 582 aaKnown RBP22.54■■□□□ 1.2
POLR2A-201ENST00000572844 DEPDC5O75140 1603 aa22.54■■□□□ 1.2
POLR2A-201ENST00000572844 ROCK2O75116 1388 aaKnown RBP22.53■■□□□ 1.2
POLR2A-201ENST00000572844 INO80Q9ULG1 1556 aaPredicted RBP22.53■■□□□ 1.2
POLR2A-201ENST00000572844 OSCARQ8IYS5 282 aa22.53■■□□□ 1.2
POLR2A-201ENST00000572844 PRAG1Q86YV5 1406 aa22.52■■□□□ 1.2
POLR2A-201ENST00000572844 DCAF11Q8TEB1 546 aa22.52■■□□□ 1.2
POLR2A-201ENST00000572844 SPAG9O60271 1321 aaKnown RBP22.52■■□□□ 1.19
POLR2A-201ENST00000572844 CARD11Q9BXL7 1154 aa22.51■■□□□ 1.19
POLR2A-201ENST00000572844 EIF2AK4Q9P2K8 1649 aaKnown RBP22.51■■□□□ 1.19
POLR2A-201ENST00000572844 FANCAO15360 1455 aa22.5■■□□□ 1.19
POLR2A-201ENST00000572844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.49■■□□□ 1.191e-6■□□□□ 11.2
POLR2A-201ENST00000572844 A2MP01023 1474 aa22.49■■□□□ 1.19
POLR2A-201ENST00000572844 DHX29Q7Z478 1369 aaKnown RBP22.48■■□□□ 1.19
POLR2A-201ENST00000572844 ATP7AQ04656 1500 aa22.48■■□□□ 1.19
POLR2A-201ENST00000572844 GPRASP1Q5JY77 1395 aa22.48■■□□□ 1.19
POLR2A-201ENST00000572844 E9PCH4 1651 aa22.47■■□□□ 1.19
POLR2A-201ENST00000572844 ASXL2Q76L83 1435 aa22.47■■□□□ 1.19
POLR2A-201ENST00000572844 KDM2AQ9Y2K7 1162 aa22.46■■□□□ 1.19
POLR2A-201ENST00000572844 TET3O43151 1660 aa22.45■■□□□ 1.18
POLR2A-201ENST00000572844 VWDEQ8N2E2 1590 aa22.44■■□□□ 1.18
POLR2A-201ENST00000572844 SPHKAPQ2M3C7 1700 aa22.43■■□□□ 1.18
POLR2A-201ENST00000572844 TRPM2O94759 1503 aa22.43■■□□□ 1.18
POLR2A-201ENST00000572844 CEP152O94986 1710 aa22.43■■□□□ 1.18
POLR2A-201ENST00000572844 ADGRL1O94910 1474 aa22.42■■□□□ 1.18
POLR2A-201ENST00000572844 AFAP1Q8N556 730 aa22.42■■□□□ 1.18
POLR2A-201ENST00000572844 PRDM15P57071 1507 aaPredicted RBP22.42■■□□□ 1.18
POLR2A-201ENST00000572844 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
POLR2A-201ENST00000572844 CFAP74Q9C0B2 1584 aa22.4■■□□□ 1.18
POLR2A-201ENST00000572844 PTPRTO14522 1441 aa22.4■■□□□ 1.18
POLR2A-201ENST00000572844 RNF17Q9BXT8 1623 aaKnown RBP22.39■■□□□ 1.18
POLR2A-201ENST00000572844 ST20-MTHFSA0A0A6YYL1 179 aa22.39■■□□□ 1.17
POLR2A-201ENST00000572844 SCAPERQ9BY12 1400 aa22.39■■□□□ 1.17
POLR2A-201ENST00000572844 CCDC184Q52MB2 194 aa22.38■■□□□ 1.17
POLR2A-201ENST00000572844 MRS2Q9HD23 443 aa22.38■■□□□ 1.17
POLR2A-201ENST00000572844 NEURL4Q96JN8 1562 aa22.37■■□□□ 1.17
POLR2A-201ENST00000572844 KTN1Q86UP2 1357 aaKnown RBP22.35■■□□□ 1.17
POLR2A-201ENST00000572844 KIDINS220Q9ULH0 1771 aa22.35■■□□□ 1.17
POLR2A-201ENST00000572844 STAC3Q96MF2 364 aa22.35■■□□□ 1.17
POLR2A-201ENST00000572844 KANK1Q14678 1352 aa22.35■■□□□ 1.17
POLR2A-201ENST00000572844 NEFLP07196 543 aa22.34■■□□□ 1.17
POLR2A-201ENST00000572844 RGL3Q3MIN7 710 aa22.34■■□□□ 1.17
POLR2A-201ENST00000572844 MROH1Q8NDA8 1641 aa22.34■■□□□ 1.17
POLR2A-201ENST00000572844 CLTCL1P53675 1640 aa22.32■■□□□ 1.16
POLR2A-201ENST00000572844 MADDQ8WXG6 1647 aa22.32■■□□□ 1.16
POLR2A-201ENST00000572844 NPM1P06748 294 aaKnown RBP eCLIP22.32■■□□□ 1.16
POLR2A-201ENST00000572844 ZNF518AQ6AHZ1 1483 aa22.31■■□□□ 1.16
POLR2A-201ENST00000572844 FKBP8Q14318 412 aa22.31■■□□□ 1.16
POLR2A-201ENST00000572844 COL17A1Q9UMD9 1497 aaPredicted RBP22.29■■□□□ 1.16
POLR2A-201ENST00000572844 ZBED9Q6R2W3 1325 aa22.29■■□□□ 1.16
POLR2A-201ENST00000572844 NBPF1Q3BBV0 1214 aa22.29■■□□□ 1.16
POLR2A-201ENST00000572844 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
POLR2A-201ENST00000572844 IQGAP1P46940 1657 aa22.27■■□□□ 1.16
POLR2A-201ENST00000572844 KIAA1210Q9ULL0 1709 aa22.27■■□□□ 1.16
POLR2A-201ENST00000572844 LMTK2Q8IWU2 1503 aa22.27■■□□□ 1.16
POLR2A-201ENST00000572844 FAM9BQ8IZU0 186 aa22.26■■□□□ 1.15
POLR2A-201ENST00000572844 EFCAB6Q5THR3 1501 aa22.24■■□□□ 1.15
POLR2A-201ENST00000572844 CD109Q6YHK3 1445 aa22.24■■□□□ 1.15
POLR2A-201ENST00000572844 RALBP1Q15311 655 aa22.24■■□□□ 1.15
POLR2A-201ENST00000572844 MLH3Q9UHC1 1453 aa22.23■■□□□ 1.15
POLR2A-201ENST00000572844 KIF3BO15066 747 aa22.23■■□□□ 1.15
POLR2A-201ENST00000572844 TESK2Q96S53 571 aa22.22■■□□□ 1.15
POLR2A-201ENST00000572844 KIF1BO60333 1816 aa22.22■■□□□ 1.15
POLR2A-201ENST00000572844 POGZQ7Z3K3 1410 aa22.22■■□□□ 1.15
POLR2A-201ENST00000572844 HECW2Q9P2P5 1572 aa22.2■■□□□ 1.15
POLR2A-201ENST00000572844 WASHC2CQ9Y4E1 1318 aa22.2■■□□□ 1.14
POLR2A-201ENST00000572844 PPRC1Q5VV67 1664 aaKnown RBP22.19■■□□□ 1.14
POLR2A-201ENST00000572844 BRD4O60885 1362 aaPredicted RBP22.19■■□□□ 1.14
POLR2A-201ENST00000572844 MYBBP1AQ9BQG0 1328 aaKnown RBP22.18■■□□□ 1.14
POLR2A-201ENST00000572844 MYT1LQ9UL68 1186 aa22.18■■□□□ 1.14
POLR2A-201ENST00000572844 IFT172Q9UG01 1749 aa22.18■■□□□ 1.14
POLR2A-201ENST00000572844 NEO1Q92859 1461 aa22.18■■□□□ 1.14
POLR2A-201ENST00000572844 MYOM2P54296 1465 aa22.16■■□□□ 1.14
POLR2A-201ENST00000572844 ERICH6BQ5W0A0 696 aa22.16■■□□□ 1.14
POLR2A-201ENST00000572844 DISP3Q9P2K9 1392 aa22.16■■□□□ 1.14
POLR2A-201ENST00000572844 TMF1P82094 1093 aa22.16■■□□□ 1.14
POLR2A-201ENST00000572844 PARD3Q8TEW0 1356 aa22.15■■□□□ 1.14
POLR2A-201ENST00000572844 PNISRQ8TF01 805 aaKnown RBP22.15■■□□□ 1.14
POLR2A-201ENST00000572844 FRMPD1Q5SYB0 1578 aa22.15■■□□□ 1.14
POLR2A-201ENST00000572844 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
POLR2A-201ENST00000572844 MAP3K4Q9Y6R4 1608 aa22.14■■□□□ 1.13
POLR2A-201ENST00000572844 LRPPRCP42704 1394 aaKnown RBP22.14■■□□□ 1.13
POLR2A-201ENST00000572844 PER1O15534 1290 aaPredicted RBP22.13■■□□□ 1.13
POLR2A-201ENST00000572844 TMC1Q8TDI8 760 aa22.12■■□□□ 1.13
POLR2A-201ENST00000572844 BCANQ96GW7 911 aa22.11■■□□□ 1.13
POLR2A-201ENST00000572844 ABCA6Q8N139 1617 aa22.11■■□□□ 1.13
POLR2A-201ENST00000572844 SMG6Q86US8 1419 aaKnown RBP22.1■■□□□ 1.13
POLR2A-201ENST00000572844 MROH2AA6NES4 1674 aa22.09■■□□□ 1.13
POLR2A-201ENST00000572844 NRXN1Q9ULB1 1477 aa22.07■■□□□ 1.12
POLR2A-201ENST00000572844 NLRP13Q86W25 1043 aa22.07■■□□□ 1.12
POLR2A-201ENST00000572844 UGGT1Q9NYU2 1555 aa22.07■■□□□ 1.12
POLR2A-201ENST00000572844 ADGRB3O60242 1522 aa22.07■■□□□ 1.12
POLR2A-201ENST00000572844 EIF3AQ14152 1382 aaKnown RBP22.07■■□□□ 1.12
POLR2A-201ENST00000572844 SYNMO15061 1565 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms