RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 IQGAP1P46940 1657 aa16.74■□□□□ 0.27
CHMP6-203ENST00000572525 KDM5DQ9BY66 1539 aa16.73■□□□□ 0.27
CHMP6-203ENST00000572525 NLRP1Q9C000 1473 aa16.73■□□□□ 0.27
CHMP6-203ENST00000572525 HNRNPMP52272 730 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHMP6-203ENST00000572525 GGT6Q6P531 493 aa16.72■□□□□ 0.27
CHMP6-203ENST00000572525 TNRQ92752 1358 aa16.71■□□□□ 0.27
CHMP6-203ENST00000572525 STRCP1A6NGW2 1772 aa16.71■□□□□ 0.27
CHMP6-203ENST00000572525 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
CHMP6-203ENST00000572525 PIP4K2BP78356 416 aa16.7■□□□□ 0.26
CHMP6-203ENST00000572525 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
CHMP6-203ENST00000572525 ZNF777Q9ULD5 760 aaPredicted RBP16.7■□□□□ 0.26
CHMP6-203ENST00000572525 UGGT1Q9NYU2 1555 aa16.68■□□□□ 0.26
CHMP6-203ENST00000572525 MBD5Q9P267 1494 aa16.68■□□□□ 0.26
CHMP6-203ENST00000572525 DHX29Q7Z478 1369 aaKnown RBP16.68■□□□□ 0.26
CHMP6-203ENST00000572525 CFDP1Q9UEE9 299 aaPredicted RBP16.68■□□□□ 0.26
CHMP6-203ENST00000572525 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
CHMP6-203ENST00000572525 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
CHMP6-203ENST00000572525 NPHP4O75161 1426 aaPredicted RBP16.67■□□□□ 0.26
CHMP6-203ENST00000572525 TIAM1Q13009 1591 aa16.67■□□□□ 0.26
CHMP6-203ENST00000572525 ZC3H13Q5T200 1668 aaKnown RBP16.66■□□□□ 0.26
CHMP6-203ENST00000572525 THEMISQ8N1K5 641 aaPredicted RBP16.66■□□□□ 0.26
CHMP6-203ENST00000572525 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
CHMP6-203ENST00000572525 MIA2Q96PC5 1412 aa16.64■□□□□ 0.25
CHMP6-203ENST00000572525 XIRP1Q702N8 1843 aaKnown RBP16.63■□□□□ 0.25
CHMP6-203ENST00000572525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHMP6-203ENST00000572525 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
CHMP6-203ENST00000572525 CCDC141Q6ZP82 1450 aa16.6■□□□□ 0.25
CHMP6-203ENST00000572525 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
CHMP6-203ENST00000572525 UBR1Q8IWV7 1749 aa16.59■□□□□ 0.25
CHMP6-203ENST00000572525 FBXO31Q5XUX0 539 aaPredicted RBP16.58■□□□□ 0.24
CHMP6-203ENST00000572525 EIF2AK4Q9P2K8 1649 aaKnown RBP16.57■□□□□ 0.24
CHMP6-203ENST00000572525 ARHGEF5Q12774 1597 aa16.57■□□□□ 0.24
CHMP6-203ENST00000572525 CEP162Q5TB80 1403 aa16.57■□□□□ 0.24
CHMP6-203ENST00000572525 KIF3BO15066 747 aa16.56■□□□□ 0.24
CHMP6-203ENST00000572525 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
CHMP6-203ENST00000572525 WASHC2CQ9Y4E1 1318 aa16.55■□□□□ 0.24
CHMP6-203ENST00000572525 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
CHMP6-203ENST00000572525 RGS17Q9UGC6 210 aaPredicted RBP16.54■□□□□ 0.24
CHMP6-203ENST00000572525 CFAP65Q6ZU64 1925 aaKnown RBP16.53■□□□□ 0.24
CHMP6-203ENST00000572525 ABCC3O15438 1527 aa16.53■□□□□ 0.24
CHMP6-203ENST00000572525 ZNF644Q9H582 1327 aaPredicted RBP16.52■□□□□ 0.24
CHMP6-203ENST00000572525 SLIT1O75093 1534 aa16.52■□□□□ 0.24
CHMP6-203ENST00000572525 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
CHMP6-203ENST00000572525 KDM5AP29375 1690 aaKnown RBP16.51■□□□□ 0.23
CHMP6-203ENST00000572525 ERVK-7P63135 1459 aa16.51■□□□□ 0.23
CHMP6-203ENST00000572525 CAMSAP2Q08AD1 1489 aa16.51■□□□□ 0.23
CHMP6-203ENST00000572525 SCAF11Q99590 1463 aaKnown RBP16.51■□□□□ 0.23
CHMP6-203ENST00000572525 ARHGAP23Q9P227 1491 aa16.51■□□□□ 0.23
CHMP6-203ENST00000572525 FAM135BQ49AJ0 1406 aa16.51■□□□□ 0.23
CHMP6-203ENST00000572525 CEP152O94986 1710 aa16.49■□□□□ 0.23
CHMP6-203ENST00000572525 MROH1Q8NDA8 1641 aa16.48■□□□□ 0.23
CHMP6-203ENST00000572525 NCOA2Q15596 1464 aa16.46■□□□□ 0.23
CHMP6-203ENST00000572525 ROBO1Q9Y6N7 1651 aa16.46■□□□□ 0.23
CHMP6-203ENST00000572525 LRRC9Q6ZRR7 1453 aa16.45■□□□□ 0.22
CHMP6-203ENST00000572525 ARHGAP31Q2M1Z3 1444 aa16.43■□□□□ 0.22
CHMP6-203ENST00000572525 SETD1AO15047 1707 aaKnown RBP16.42■□□□□ 0.22
CHMP6-203ENST00000572525 CHIC1Q5VXU3 224 aa16.42■□□□□ 0.22
CHMP6-203ENST00000572525 PRDM15P57071 1507 aaPredicted RBP16.4■□□□□ 0.22
CHMP6-203ENST00000572525 TSPY4P0CV99 314 aa16.4■□□□□ 0.22
CHMP6-203ENST00000572525 TSPY10P0CW01 314 aa16.4■□□□□ 0.22
CHMP6-203ENST00000572525 POTEAQ6S8J7 498 aa16.4■□□□□ 0.22
CHMP6-203ENST00000572525 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
CHMP6-203ENST00000572525 NWD1Q149M9 1564 aa16.39■□□□□ 0.21
CHMP6-203ENST00000572525 PIK3C2BO00750 1634 aa16.39■□□□□ 0.21
CHMP6-203ENST00000572525 NKTRP30414 1462 aaKnown RBP16.38■□□□□ 0.21
CHMP6-203ENST00000572525 PHLPP1O60346 1717 aa16.37■□□□□ 0.21
CHMP6-203ENST00000572525 DUOX2Q9NRD8 1548 aa16.37■□□□□ 0.21
CHMP6-203ENST00000572525 LTKP29376 864 aa16.36■□□□□ 0.21
CHMP6-203ENST00000572525 TET3O43151 1660 aa16.36■□□□□ 0.21
CHMP6-203ENST00000572525 TXNDC2Q86VQ3 553 aa16.35■□□□□ 0.21
CHMP6-203ENST00000572525 EID1Q9Y6B2 187 aa16.35■□□□□ 0.21
CHMP6-203ENST00000572525 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
CHMP6-203ENST00000572525 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
CHMP6-203ENST00000572525 TMEM2Q9UHN6 1383 aa16.34■□□□□ 0.21
CHMP6-203ENST00000572525 EFCAB6Q5THR3 1501 aa16.33■□□□□ 0.2
CHMP6-203ENST00000572525 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.2
CHMP6-203ENST00000572525 CROCC2H7BZ55 1655 aa16.32■□□□□ 0.2
CHMP6-203ENST00000572525 COL16A1Q07092 1604 aaPredicted RBP16.32■□□□□ 0.2
CHMP6-203ENST00000572525 JCADQ9P266 1359 aa16.31■□□□□ 0.2
CHMP6-203ENST00000572525 KCNA6P17658 529 aa16.31■□□□□ 0.2
CHMP6-203ENST00000572525 ERBINQ96RT1 1412 aa16.3■□□□□ 0.2
CHMP6-203ENST00000572525 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
CHMP6-203ENST00000572525 LMTK2Q8IWU2 1503 aa16.29■□□□□ 0.2
CHMP6-203ENST00000572525 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
CHMP6-203ENST00000572525 MSH6P52701 1360 aa16.26■□□□□ 0.19
CHMP6-203ENST00000572525 ADGRB3O60242 1522 aa16.26■□□□□ 0.19
CHMP6-203ENST00000572525 MYOM3Q5VTT5 1437 aa16.26■□□□□ 0.19
CHMP6-203ENST00000572525 NCOA3Q9Y6Q9 1424 aa16.26■□□□□ 0.19
CHMP6-203ENST00000572525 CDK12Q9NYV4 1490 aaPredicted RBP16.25■□□□□ 0.19
CHMP6-203ENST00000572525 AHDC1Q5TGY3 1603 aaPredicted RBP16.25■□□□□ 0.19
CHMP6-203ENST00000572525 SPATA31A6Q5VVP1 1343 aa16.24■□□□□ 0.19
CHMP6-203ENST00000572525 PROSER2Q86WR7 435 aaPredicted RBP16.23■□□□□ 0.19
CHMP6-203ENST00000572525 MYO5BQ9ULV0 1848 aa16.22■□□□□ 0.19
CHMP6-203ENST00000572525 UPF1Q92900 1129 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHMP6-203ENST00000572525 SRCAPQ6ZRS2 3230 aa16.22■□□□□ 0.19
CHMP6-203ENST00000572525 NOS1P29475 1434 aa16.21■□□□□ 0.19
CHMP6-203ENST00000572525 ZNF772Q68DY9 489 aaPredicted RBP16.21■□□□□ 0.19
CHMP6-203ENST00000572525 SLAIN2Q9P270 581 aa16.21■□□□□ 0.19
CHMP6-203ENST00000572525 KANK1Q14678 1352 aa16.21■□□□□ 0.19
CHMP6-203ENST00000572525 KIF15Q9NS87 1388 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms