RNA–Protein interactions for RNA: ENST00000572433.5

ITGAE-208, Transcript of integrin subunit alpha E, humanhuman

TSL 2

Gene ITGAE, Length 731 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-208ENST00000572433 NPDC1Q9NQX5 325 aaPredicted RBP16.57■□□□□ 0.24
ITGAE-208ENST00000572433 HOXB3P14651 431 aaPredicted RBP16.56■□□□□ 0.24
ITGAE-208ENST00000572433 IL27Q8NEV9 243 aa16.56■□□□□ 0.24
ITGAE-208ENST00000572433 POTEB2H3BUK9 544 aa16.55■□□□□ 0.24
ITGAE-208ENST00000572433 TSR1Q2NL82 804 aaKnown RBP16.54■□□□□ 0.24
ITGAE-208ENST00000572433 NUDT7P0C024 238 aa16.53■□□□□ 0.24
ITGAE-208ENST00000572433 ARSIQ5FYB1 569 aa16.53■□□□□ 0.24
ITGAE-208ENST00000572433 ZNF454Q8N9F8 522 aa16.53■□□□□ 0.24
ITGAE-208ENST00000572433 PARP9Q8IXQ6 854 aa16.52■□□□□ 0.24
ITGAE-208ENST00000572433 CERKQ8TCT0 537 aa16.52■□□□□ 0.24
ITGAE-208ENST00000572433 ZDHHC16Q969W1 377 aa16.52■□□□□ 0.24
ITGAE-208ENST00000572433 TTLL12Q14166 644 aaPredicted RBP16.51■□□□□ 0.23
ITGAE-208ENST00000572433 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
ITGAE-208ENST00000572433 DDRGK1Q96HY6 314 aa16.49■□□□□ 0.23
ITGAE-208ENST00000572433 GPR153Q6NV75 609 aa16.48■□□□□ 0.23
ITGAE-208ENST00000572433 KHSRPQ92945 711 aaKnown RBP eCLIP16.48■□□□□ 0.23
ITGAE-208ENST00000572433 C6orf132Q5T0Z8 1188 aa16.47■□□□□ 0.23
ITGAE-208ENST00000572433 FAM117AQ9C073 453 aa16.46■□□□□ 0.23
ITGAE-208ENST00000572433 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
ITGAE-208ENST00000572433 SNPHO15079 494 aa16.42■□□□□ 0.22
ITGAE-208ENST00000572433 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
ITGAE-208ENST00000572433 ADAM33Q9BZ11 813 aa16.41■□□□□ 0.22
ITGAE-208ENST00000572433 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
ITGAE-208ENST00000572433 OATP04181 439 aa16.39■□□□□ 0.21
ITGAE-208ENST00000572433 CLCN1P35523 988 aa16.39■□□□□ 0.21
ITGAE-208ENST00000572433 GIGYF2Q6Y7W6 1299 aaKnown RBP16.39■□□□□ 0.21
ITGAE-208ENST00000572433 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
ITGAE-208ENST00000572433 PADI6Q6TGC4 694 aa16.38■□□□□ 0.21
ITGAE-208ENST00000572433 LHX6Q9UPM6 363 aa16.38■□□□□ 0.21
ITGAE-208ENST00000572433 PLEKHG3A1L390 1219 aa16.36■□□□□ 0.21
ITGAE-208ENST00000572433 GPCPD1Q9NPB8 672 aa16.34■□□□□ 0.21
ITGAE-208ENST00000572433 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.2
ITGAE-208ENST00000572433 METTL3Q86U44 580 aaKnown RBP16.33■□□□□ 0.2
ITGAE-208ENST00000572433 TTC13Q8NBP0 860 aa16.33■□□□□ 0.2
ITGAE-208ENST00000572433 PRSS12P56730 875 aa16.32■□□□□ 0.2
ITGAE-208ENST00000572433 TMUB1Q9BVT8 246 aa16.32■□□□□ 0.2
ITGAE-208ENST00000572433 ADGRG1Q9Y653 693 aa16.32■□□□□ 0.2
ITGAE-208ENST00000572433 PHOX2BQ99453 314 aa16.31■□□□□ 0.2
ITGAE-208ENST00000572433 REPIN1Q9BWE0 567 aaKnown RBP16.31■□□□□ 0.2
ITGAE-208ENST00000572433 BCL2L12Q9HB09 334 aa16.31■□□□□ 0.2
ITGAE-208ENST00000572433 MS4A1P11836 297 aa16.3■□□□□ 0.2
ITGAE-208ENST00000572433 HOXB1P14653 301 aaPredicted RBP16.29■□□□□ 0.2
ITGAE-208ENST00000572433 FAM161AQ3B820 660 aa16.29■□□□□ 0.2
ITGAE-208ENST00000572433 PXYLP1Q8TE99 480 aa16.29■□□□□ 0.2
ITGAE-208ENST00000572433 CDCA7LQ96GN5 454 aa16.29■□□□□ 0.2
ITGAE-208ENST00000572433 GOPCQ9HD26 462 aa16.27■□□□□ 0.2
ITGAE-208ENST00000572433 PTPREP23469 700 aa16.26■□□□□ 0.19
ITGAE-208ENST00000572433 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
ITGAE-208ENST00000572433 PPP1R3GB7ZBB8 358 aa16.24■□□□□ 0.19
ITGAE-208ENST00000572433 SSTR3P32745 418 aaPredicted RBP16.24■□□□□ 0.19
ITGAE-208ENST00000572433 COL9A1P20849 921 aa16.22■□□□□ 0.19
ITGAE-208ENST00000572433 FAM217BQ9NTX9 383 aaPredicted RBP16.2■□□□□ 0.18
ITGAE-208ENST00000572433 NLRP7Q8WX94 980 aa16.18■□□□□ 0.18
ITGAE-208ENST00000572433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.17■□□□□ 0.18
ITGAE-208ENST00000572433 PCMTD1Q96MG8 357 aaPredicted RBP16.17■□□□□ 0.18
ITGAE-208ENST00000572433 KCNH8Q96L42 1107 aa16.16■□□□□ 0.18
ITGAE-208ENST00000572433 BEGAINQ9BUH8 593 aa16.16■□□□□ 0.18
ITGAE-208ENST00000572433 RSPH6AQ9H0K4 717 aa16.16■□□□□ 0.18
ITGAE-208ENST00000572433 FAM198AQ9UFP1 575 aa16.16■□□□□ 0.18
ITGAE-208ENST00000572433 SH3D19Q5HYK7 790 aa16.15■□□□□ 0.18
ITGAE-208ENST00000572433 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
ITGAE-208ENST00000572433 NBPF26B4DH59 902 aa16.14■□□□□ 0.17
ITGAE-208ENST00000572433 TSKSQ9UJT2 592 aa16.14■□□□□ 0.17
ITGAE-208ENST00000572433 TRIM6-TRIM34B2RNG4 842 aa16.12■□□□□ 0.17
ITGAE-208ENST00000572433 PACS2Q86VP3 889 aa16.12■□□□□ 0.17
ITGAE-208ENST00000572433 EYA1Q99502 592 aa16.12■□□□□ 0.17
ITGAE-208ENST00000572433 RCCD1A6NED2 376 aa16.11■□□□□ 0.17
ITGAE-208ENST00000572433 KCNK17Q96T54 332 aa16.1■□□□□ 0.17
ITGAE-208ENST00000572433 NUDT18Q6ZVK8 323 aa16.09■□□□□ 0.17
ITGAE-208ENST00000572433 ONECUT3O60422 494 aaPredicted RBP16.08■□□□□ 0.16
ITGAE-208ENST00000572433 SKIV2LQ15477 1246 aaKnown RBP16.08■□□□□ 0.16
ITGAE-208ENST00000572433 PNMA3Q9UL41 463 aa16.08■□□□□ 0.16
ITGAE-208ENST00000572433 DNAJB2P25686 324 aa16.07■□□□□ 0.16
ITGAE-208ENST00000572433 TATDN2Q93075 761 aa16.07■□□□□ 0.16
ITGAE-208ENST00000572433 DIXDC1Q155Q3 683 aa16.05■□□□□ 0.16
ITGAE-208ENST00000572433 SULF1Q8IWU6 871 aa16.04■□□□□ 0.16
ITGAE-208ENST00000572433 FLIIQ13045 1269 aa16.03■□□□□ 0.16
ITGAE-208ENST00000572433 ERBB3P21860 1342 aa16.02■□□□□ 0.16
ITGAE-208ENST00000572433 PROX2Q3B8N5 592 aa16.02■□□□□ 0.16
ITGAE-208ENST00000572433 LHX8Q68G74 356 aa16.02■□□□□ 0.16
ITGAE-208ENST00000572433 C3orf80F5H4A9 247 aa16■□□□□ 0.15
ITGAE-208ENST00000572433 TMEM134Q9H6X4 195 aa16■□□□□ 0.15
ITGAE-208ENST00000572433 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
ITGAE-208ENST00000572433 MYSM1Q5VVJ2 828 aa15.99■□□□□ 0.15
ITGAE-208ENST00000572433 ZBED2Q9BTP6 218 aa15.99■□□□□ 0.15
ITGAE-208ENST00000572433 TBC1D2Q9BYX2 928 aa15.98■□□□□ 0.15
ITGAE-208ENST00000572433 ZMYND15Q9H091 742 aa15.98■□□□□ 0.15
ITGAE-208ENST00000572433 POLR3EQ9NVU0 708 aa15.98■□□□□ 0.15
ITGAE-208ENST00000572433 CD46P15529 392 aa15.97■□□□□ 0.15
ITGAE-208ENST00000572433 VARS2Q5ST30 1063 aaKnown RBP15.97■□□□□ 0.15
ITGAE-208ENST00000572433 DDX11L8A8MPP1 907 aa15.96■□□□□ 0.15
ITGAE-208ENST00000572433 ARHGAP33O14559 1287 aa15.96■□□□□ 0.15
ITGAE-208ENST00000572433 KIAA1468Q9P260 1216 aa15.96■□□□□ 0.15
ITGAE-208ENST00000572433 SMAPO00193 183 aa15.95■□□□□ 0.14
ITGAE-208ENST00000572433 PSEN2P49810 448 aa15.95■□□□□ 0.14
ITGAE-208ENST00000572433 CLK2P49760 499 aaKnown RBP15.94■□□□□ 0.14
ITGAE-208ENST00000572433 PROCA1Q8NCQ7 364 aaPredicted RBP15.93■□□□□ 0.14
ITGAE-208ENST00000572433 SLC4A5Q9BY07 1137 aa15.93■□□□□ 0.14
ITGAE-208ENST00000572433 PBX2P40425 430 aa15.92■□□□□ 0.14
ITGAE-208ENST00000572433 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms