RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
TOM1L1-213ENST00000572405 HECW2Q9P2P5 1572 aa17.22■□□□□ 0.35
TOM1L1-213ENST00000572405 DEPDC5O75140 1603 aa17.2■□□□□ 0.34
TOM1L1-213ENST00000572405 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
TOM1L1-213ENST00000572405 RAPGEF3O95398 923 aa17.2■□□□□ 0.34
TOM1L1-213ENST00000572405 MLH3Q9UHC1 1453 aa17.19■□□□□ 0.34
TOM1L1-213ENST00000572405 EIF2AK4Q9P2K8 1649 aaKnown RBP17.19■□□□□ 0.34
TOM1L1-213ENST00000572405 TSPOAP1O95153 1857 aa17.18■□□□□ 0.34
TOM1L1-213ENST00000572405 ABCA6Q8N139 1617 aa17.17■□□□□ 0.34
TOM1L1-213ENST00000572405 KIF3BO15066 747 aa17.17■□□□□ 0.34
TOM1L1-213ENST00000572405 RICTORQ6R327 1708 aa17.17■□□□□ 0.34
TOM1L1-213ENST00000572405 PPRC1Q5VV67 1664 aaKnown RBP17.16■□□□□ 0.34
TOM1L1-213ENST00000572405 A2MP01023 1474 aa17.16■□□□□ 0.34
TOM1L1-213ENST00000572405 PLA2R1Q13018 1463 aa17.16■□□□□ 0.34
TOM1L1-213ENST00000572405 MROH1Q8NDA8 1641 aa17.16■□□□□ 0.34
TOM1L1-213ENST00000572405 FRMPD1Q5SYB0 1578 aa17.15■□□□□ 0.34
TOM1L1-213ENST00000572405 HIRIP3Q9BW71 556 aaPredicted RBP17.15■□□□□ 0.34
TOM1L1-213ENST00000572405 PRDM15P57071 1507 aaPredicted RBP17.14■□□□□ 0.33
TOM1L1-213ENST00000572405 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
TOM1L1-213ENST00000572405 VWDEQ8N2E2 1590 aa17.13■□□□□ 0.33
TOM1L1-213ENST00000572405 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
TOM1L1-213ENST00000572405 E9PCH4 1651 aa17.13■□□□□ 0.33
TOM1L1-213ENST00000572405 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
TOM1L1-213ENST00000572405 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
TOM1L1-213ENST00000572405 KANK1Q14678 1352 aa17.11■□□□□ 0.33
TOM1L1-213ENST00000572405 TET3O43151 1660 aa17.11■□□□□ 0.33
TOM1L1-213ENST00000572405 RNF17Q9BXT8 1623 aaKnown RBP17.1■□□□□ 0.33
TOM1L1-213ENST00000572405 YEATS2Q9ULM3 1422 aa17.09■□□□□ 0.33
TOM1L1-213ENST00000572405 ATP10AO60312 1499 aa17.09■□□□□ 0.33
TOM1L1-213ENST00000572405 ZNF326Q5BKZ1 582 aaKnown RBP17.07■□□□□ 0.32
TOM1L1-213ENST00000572405 CEP152O94986 1710 aa17.06■□□□□ 0.32
TOM1L1-213ENST00000572405 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
TOM1L1-213ENST00000572405 SPHKAPQ2M3C7 1700 aa17.05■□□□□ 0.32
TOM1L1-213ENST00000572405 BCORL1Q5H9F3 1711 aa17.05■□□□□ 0.32
TOM1L1-213ENST00000572405 TRPM2O94759 1503 aa17.05■□□□□ 0.32
TOM1L1-213ENST00000572405 EFCAB6Q5THR3 1501 aa17.04■□□□□ 0.32
TOM1L1-213ENST00000572405 MIER1Q8N108 512 aa17.04■□□□□ 0.32
TOM1L1-213ENST00000572405 HSPA5P11021 654 aaKnown RBP17.03■□□□□ 0.32
TOM1L1-213ENST00000572405 GGT6Q6P531 493 aa17.03■□□□□ 0.32
TOM1L1-213ENST00000572405 RGL3Q3MIN7 710 aa17.03■□□□□ 0.32
TOM1L1-213ENST00000572405 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
TOM1L1-213ENST00000572405 KDM2AQ9Y2K7 1162 aa17.03■□□□□ 0.32
TOM1L1-213ENST00000572405 UHRF1BP1Q6BDS2 1440 aa17.03■□□□□ 0.32
TOM1L1-213ENST00000572405 PTPRTO14522 1441 aa17.02■□□□□ 0.32
TOM1L1-213ENST00000572405 LMTK2Q8IWU2 1503 aa17.02■□□□□ 0.32
TOM1L1-213ENST00000572405 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
TOM1L1-213ENST00000572405 CLTCL1P53675 1640 aa17.01■□□□□ 0.31
TOM1L1-213ENST00000572405 COL17A1Q9UMD9 1497 aaPredicted RBP16.99■□□□□ 0.31
TOM1L1-213ENST00000572405 ABCC3O15438 1527 aa16.99■□□□□ 0.31
TOM1L1-213ENST00000572405 RALGAPBQ86X10 1494 aa16.98■□□□□ 0.31
TOM1L1-213ENST00000572405 DDX10Q13206 875 aaKnown RBP16.98■□□□□ 0.31
TOM1L1-213ENST00000572405 SPATA31E1Q6ZUB1 1445 aa16.98■□□□□ 0.31
TOM1L1-213ENST00000572405 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
TOM1L1-213ENST00000572405 NPATQ14207 1427 aa16.96■□□□□ 0.31
TOM1L1-213ENST00000572405 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
TOM1L1-213ENST00000572405 WASHC2CQ9Y4E1 1318 aa16.95■□□□□ 0.3
TOM1L1-213ENST00000572405 CAMSAP1Q5T5Y3 1602 aa16.94■□□□□ 0.3
TOM1L1-213ENST00000572405 USP47Q96K76 1375 aa16.93■□□□□ 0.3
TOM1L1-213ENST00000572405 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
TOM1L1-213ENST00000572405 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
TOM1L1-213ENST00000572405 WASHC2AQ641Q2 1341 aa16.91■□□□□ 0.3
TOM1L1-213ENST00000572405 ARHGEF40Q8TER5 1519 aa16.91■□□□□ 0.3
TOM1L1-213ENST00000572405 SIGLEC1Q9BZZ2 1709 aa16.91■□□□□ 0.3
TOM1L1-213ENST00000572405 REREQ9P2R6 1566 aa16.9■□□□□ 0.3
TOM1L1-213ENST00000572405 ZC3H13Q5T200 1668 aaKnown RBP16.9■□□□□ 0.3
TOM1L1-213ENST00000572405 CARD11Q9BXL7 1154 aa16.9■□□□□ 0.3
TOM1L1-213ENST00000572405 ROCK2O75116 1388 aaKnown RBP16.9■□□□□ 0.3
TOM1L1-213ENST00000572405 C11orf95C9JLR9 678 aaPredicted RBP16.88■□□□□ 0.29
TOM1L1-213ENST00000572405 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
TOM1L1-213ENST00000572405 KIF1BO60333 1816 aa16.87■□□□□ 0.29
TOM1L1-213ENST00000572405 AGLP35573 1532 aa16.87■□□□□ 0.29
TOM1L1-213ENST00000572405 MADDQ8WXG6 1647 aa16.87■□□□□ 0.29
TOM1L1-213ENST00000572405 CNTLNQ9NXG0 1405 aa16.86■□□□□ 0.29
TOM1L1-213ENST00000572405 NEURL4Q96JN8 1562 aa16.86■□□□□ 0.29
TOM1L1-213ENST00000572405 NBPF1Q3BBV0 1214 aa16.86■□□□□ 0.29
TOM1L1-213ENST00000572405 CCDC7Q96M83 1385 aa16.85■□□□□ 0.29
TOM1L1-213ENST00000572405 NOS1P29475 1434 aa16.84■□□□□ 0.29
TOM1L1-213ENST00000572405 SYNMO15061 1565 aa16.84■□□□□ 0.29
TOM1L1-213ENST00000572405 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
TOM1L1-213ENST00000572405 ARHGAP31Q2M1Z3 1444 aa16.84■□□□□ 0.29
TOM1L1-213ENST00000572405 POLR1AO95602 1720 aaPredicted RBP16.84■□□□□ 0.29
TOM1L1-213ENST00000572405 GPRASP1Q5JY77 1395 aa16.83■□□□□ 0.29
TOM1L1-213ENST00000572405 KIF7Q2M1P5 1343 aa16.82■□□□□ 0.28
TOM1L1-213ENST00000572405 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
TOM1L1-213ENST00000572405 CHGAP10645 457 aaKnown RBP16.81■□□□□ 0.28
TOM1L1-213ENST00000572405 LAMC1P11047 1609 aa16.81■□□□□ 0.28
TOM1L1-213ENST00000572405 IFT172Q9UG01 1749 aa16.81■□□□□ 0.28
TOM1L1-213ENST00000572405 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
TOM1L1-213ENST00000572405 MLECQ14165 292 aa16.8■□□□□ 0.28
TOM1L1-213ENST00000572405 PIK3C2BO00750 1634 aa16.8■□□□□ 0.28
TOM1L1-213ENST00000572405 PREX1Q8TCU6 1659 aa16.8■□□□□ 0.28
TOM1L1-213ENST00000572405 YTHDC1Q96MU7 727 aaKnown RBP16.79■□□□□ 0.28
TOM1L1-213ENST00000572405 CLTCQ00610 1675 aaKnown RBP16.79■□□□□ 0.28
TOM1L1-213ENST00000572405 MYOM2P54296 1465 aa16.79■□□□□ 0.28
TOM1L1-213ENST00000572405 ADGRF5Q8IZF2 1346 aa16.76■□□□□ 0.27
TOM1L1-213ENST00000572405 STAC3Q96MF2 364 aa16.76■□□□□ 0.27
TOM1L1-213ENST00000572405 FBXO31Q5XUX0 539 aaPredicted RBP16.75■□□□□ 0.27
TOM1L1-213ENST00000572405 ANP32CO43423 234 aa16.75■□□□□ 0.27
TOM1L1-213ENST00000572405 POLR3GLQ9BT43 218 aa16.75■□□□□ 0.27
TOM1L1-213ENST00000572405 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms