RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 LRRC9Q6ZRR7 1453 aa23.46■■□□□ 1.35
NPLOC4-207ENST00000572346 DNMT1P26358 1616 aaKnown RBP23.45■■□□□ 1.34
NPLOC4-207ENST00000572346 KDM5DQ9BY66 1539 aa23.45■■□□□ 1.34
NPLOC4-207ENST00000572346 FAM135AQ9P2D6 1515 aa23.45■■□□□ 1.34
NPLOC4-207ENST00000572346 ZNF335Q9H4Z2 1342 aaPredicted RBP23.45■■□□□ 1.34
NPLOC4-207ENST00000572346 FBXO31Q5XUX0 539 aaPredicted RBP23.43■■□□□ 1.34
NPLOC4-207ENST00000572346 PZPP20742 1482 aa23.43■■□□□ 1.34
NPLOC4-207ENST00000572346 TSPY4P0CV99 314 aa23.42■■□□□ 1.34
NPLOC4-207ENST00000572346 TSPY10P0CW01 314 aa23.42■■□□□ 1.34
NPLOC4-207ENST00000572346 TNRQ92752 1358 aa23.41■■□□□ 1.34
NPLOC4-207ENST00000572346 WASHC2CQ9Y4E1 1318 aa23.41■■□□□ 1.34
NPLOC4-207ENST00000572346 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
NPLOC4-207ENST00000572346 MAP3K1Q13233 1512 aa23.37■■□□□ 1.33
NPLOC4-207ENST00000572346 DISP3Q9P2K9 1392 aa23.37■■□□□ 1.33
NPLOC4-207ENST00000572346 MAST1Q9Y2H9 1570 aa23.36■■□□□ 1.33
NPLOC4-207ENST00000572346 POLR1AO95602 1720 aaPredicted RBP23.36■■□□□ 1.33
NPLOC4-207ENST00000572346 MIA2Q96PC5 1412 aa23.33■■□□□ 1.33
NPLOC4-207ENST00000572346 RNF17Q9BXT8 1623 aaKnown RBP23.33■■□□□ 1.33
NPLOC4-207ENST00000572346 NEURL4Q96JN8 1562 aa23.33■■□□□ 1.33
NPLOC4-207ENST00000572346 MYOM3Q5VTT5 1437 aa23.33■■□□□ 1.32
NPLOC4-207ENST00000572346 NLRP1Q9C000 1473 aa23.31■■□□□ 1.32
NPLOC4-207ENST00000572346 UBAP1LF5GYI3 381 aa23.3■■□□□ 1.32
NPLOC4-207ENST00000572346 EIF2AK4Q9P2K8 1649 aaKnown RBP23.3■■□□□ 1.32
NPLOC4-207ENST00000572346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.29■■□□□ 1.32
NPLOC4-207ENST00000572346 ZC3H13Q5T200 1668 aaKnown RBP23.29■■□□□ 1.32
NPLOC4-207ENST00000572346 UGGT1Q9NYU2 1555 aa23.29■■□□□ 1.32
NPLOC4-207ENST00000572346 ABCC3O15438 1527 aa23.28■■□□□ 1.32
NPLOC4-207ENST00000572346 SPATA31D1Q6ZQQ2 1576 aa23.28■■□□□ 1.32
NPLOC4-207ENST00000572346 ILDR2Q71H61 639 aa23.28■■□□□ 1.32
NPLOC4-207ENST00000572346 ANKLE2Q86XL3 938 aa23.27■■□□□ 1.32
NPLOC4-207ENST00000572346 THEMISQ8N1K5 641 aaPredicted RBP23.27■■□□□ 1.32
NPLOC4-207ENST00000572346 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
NPLOC4-207ENST00000572346 CPS1P31327 1500 aa23.23■■□□□ 1.31
NPLOC4-207ENST00000572346 SHANK2Q9UPX8 1470 aa23.23■■□□□ 1.31
NPLOC4-207ENST00000572346 DUOX2Q9NRD8 1548 aa23.23■■□□□ 1.31
NPLOC4-207ENST00000572346 DEPDC5O75140 1603 aa23.22■■□□□ 1.31
NPLOC4-207ENST00000572346 MED14O60244 1454 aa23.22■■□□□ 1.31
NPLOC4-207ENST00000572346 CEP152O94986 1710 aa23.22■■□□□ 1.31
NPLOC4-207ENST00000572346 ERVK-7P63135 1459 aa23.21■■□□□ 1.31
NPLOC4-207ENST00000572346 NPHP4O75161 1426 aaPredicted RBP23.2■■□□□ 1.3
NPLOC4-207ENST00000572346 VWDEQ8N2E2 1590 aa23.19■■□□□ 1.3
NPLOC4-207ENST00000572346 CROCC2H7BZ55 1655 aa23.19■■□□□ 1.3
NPLOC4-207ENST00000572346 CFAP65Q6ZU64 1925 aaKnown RBP23.18■■□□□ 1.3
NPLOC4-207ENST00000572346 PTPN23Q9H3S7 1636 aa23.18■■□□□ 1.3
NPLOC4-207ENST00000572346 ABCC5O15440 1437 aa23.17■■□□□ 1.3
NPLOC4-207ENST00000572346 KIF15Q9NS87 1388 aa23.16■■□□□ 1.3
NPLOC4-207ENST00000572346 IQGAP1P46940 1657 aa23.16■■□□□ 1.3
NPLOC4-207ENST00000572346 APLP2Q06481 763 aa23.15■■□□□ 1.3
NPLOC4-207ENST00000572346 PRDM15P57071 1507 aaPredicted RBP23.14■■□□□ 1.3
NPLOC4-207ENST00000572346 ERBINQ96RT1 1412 aa23.14■■□□□ 1.29
NPLOC4-207ENST00000572346 SOCS7O14512 581 aa23.13■■□□□ 1.29
NPLOC4-207ENST00000572346 TOM1O60784 492 aa23.13■■□□□ 1.29
NPLOC4-207ENST00000572346 RRP7BPQ9NSQ0 103 aa23.13■■□□□ 1.29
NPLOC4-207ENST00000572346 UBR1Q8IWV7 1749 aa23.13■■□□□ 1.29
NPLOC4-207ENST00000572346 DAPK1P53355 1430 aa23.12■■□□□ 1.29
NPLOC4-207ENST00000572346 SCAF1Q9H7N4 1312 aaKnown RBP23.11■■□□□ 1.29
NPLOC4-207ENST00000572346 ARHGAP31Q2M1Z3 1444 aa23.11■■□□□ 1.29
NPLOC4-207ENST00000572346 PIP4K2BP78356 416 aa23.11■■□□□ 1.29
NPLOC4-207ENST00000572346 FGD6Q6ZV73 1430 aa23.1■■□□□ 1.29
NPLOC4-207ENST00000572346 STRCP1A6NGW2 1772 aa23.09■■□□□ 1.29
NPLOC4-207ENST00000572346 HSPA1LP34931 641 aa23.08■■□□□ 1.29
NPLOC4-207ENST00000572346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.06■■□□□ 1.286e-8■■□□□ 14.5
NPLOC4-207ENST00000572346 SCAF11Q99590 1463 aaKnown RBP23.05■■□□□ 1.28
NPLOC4-207ENST00000572346 ALKQ9UM73 1620 aa23.05■■□□□ 1.28
NPLOC4-207ENST00000572346 ARHGAP23Q9P227 1491 aa23.05■■□□□ 1.28
NPLOC4-207ENST00000572346 SLIT1O75093 1534 aa23.04■■□□□ 1.28
NPLOC4-207ENST00000572346 LRRC7Q96NW7 1537 aa23.03■■□□□ 1.28
NPLOC4-207ENST00000572346 LTKP29376 864 aa23.03■■□□□ 1.28
NPLOC4-207ENST00000572346 CHIC2Q9UKJ5 165 aa23.03■■□□□ 1.28
NPLOC4-207ENST00000572346 KANK1Q14678 1352 aa23.02■■□□□ 1.28
NPLOC4-207ENST00000572346 ANKRD30AQ9BXX3 1397 aa23.02■■□□□ 1.28
NPLOC4-207ENST00000572346 SYNMO15061 1565 aa23.02■■□□□ 1.28
NPLOC4-207ENST00000572346 PIK3C2BO00750 1634 aa23.01■■□□□ 1.27
NPLOC4-207ENST00000572346 TXNDC2Q86VQ3 553 aa23.01■■□□□ 1.27
NPLOC4-207ENST00000572346 LMTK2Q8IWU2 1503 aa22.99■■□□□ 1.27
NPLOC4-207ENST00000572346 MED1Q15648 1581 aaPredicted RBP22.97■■□□□ 1.27
NPLOC4-207ENST00000572346 EID1Q9Y6B2 187 aa22.96■■□□□ 1.27
NPLOC4-207ENST00000572346 TMEM2Q9UHN6 1383 aa22.95■■□□□ 1.26
NPLOC4-207ENST00000572346 KDM5AP29375 1690 aaKnown RBP22.94■■□□□ 1.26
NPLOC4-207ENST00000572346 ADGRL2O95490 1459 aa22.94■■□□□ 1.26
NPLOC4-207ENST00000572346 STAG3Q9UJ98 1225 aa22.94■■□□□ 1.26
NPLOC4-207ENST00000572346 IDI1Q13907 227 aa22.93■■□□□ 1.26
NPLOC4-207ENST00000572346 EFCAB6Q5THR3 1501 aa22.92■■□□□ 1.26
NPLOC4-207ENST00000572346 NOS1P29475 1434 aa22.91■■□□□ 1.26
NPLOC4-207ENST00000572346 XIRP1Q702N8 1843 aaKnown RBP22.9■■□□□ 1.26
NPLOC4-207ENST00000572346 FAM50AQ14320 339 aaKnown RBP22.9■■□□□ 1.26
NPLOC4-207ENST00000572346 ANKRD50Q9ULJ7 1429 aa22.87■■□□□ 1.25
NPLOC4-207ENST00000572346 SENP3Q9H4L4 574 aaPredicted RBP22.86■■□□□ 1.25
NPLOC4-207ENST00000572346 ADGRB3O60242 1522 aa22.86■■□□□ 1.25
NPLOC4-207ENST00000572346 TET3O43151 1660 aa22.84■■□□□ 1.25
NPLOC4-207ENST00000572346 SLC52A1Q9NWF4 448 aa22.84■■□□□ 1.25
NPLOC4-207ENST00000572346 RPRD2Q5VT52 1461 aaKnown RBP22.83■■□□□ 1.25
NPLOC4-207ENST00000572346 SLC26A8Q96RN1 970 aa22.81■■□□□ 1.24
NPLOC4-207ENST00000572346 KCNA6P17658 529 aa22.8■■□□□ 1.24
NPLOC4-207ENST00000572346 TMEM94Q12767 1356 aa22.79■■□□□ 1.24
NPLOC4-207ENST00000572346 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
NPLOC4-207ENST00000572346 MYO5BQ9ULV0 1848 aa22.77■■□□□ 1.24
NPLOC4-207ENST00000572346 UNC13BO14795 1591 aa22.76■■□□□ 1.23
NPLOC4-207ENST00000572346 GCC2Q8IWJ2 1684 aa22.76■■□□□ 1.23
NPLOC4-207ENST00000572346 NWD1Q149M9 1564 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms