RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 LTBP4Q8N2S1 1624 aa20.4■□□□□ 0.86
ATP2A3-211ENST00000572176 MIA2Q96PC5 1412 aa20.4■□□□□ 0.86
ATP2A3-211ENST00000572176 KIF3BO15066 747 aa20.39■□□□□ 0.85
ATP2A3-211ENST00000572176 PZPP20742 1482 aa20.38■□□□□ 0.85
ATP2A3-211ENST00000572176 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
ATP2A3-211ENST00000572176 RNF17Q9BXT8 1623 aaKnown RBP20.37■□□□□ 0.85
ATP2A3-211ENST00000572176 A2ML1A8K2U0 1454 aa20.37■□□□□ 0.85
ATP2A3-211ENST00000572176 TSPY4P0CV99 314 aa20.36■□□□□ 0.85
ATP2A3-211ENST00000572176 TSPY10P0CW01 314 aa20.36■□□□□ 0.85
ATP2A3-211ENST00000572176 DNMT1P26358 1616 aaKnown RBP20.35■□□□□ 0.85
ATP2A3-211ENST00000572176 EIF2AK4Q9P2K8 1649 aaKnown RBP20.35■□□□□ 0.85
ATP2A3-211ENST00000572176 IQSEC2Q5JU85 1478 aa20.32■□□□□ 0.84
ATP2A3-211ENST00000572176 TNRQ92752 1358 aa20.32■□□□□ 0.84
ATP2A3-211ENST00000572176 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
ATP2A3-211ENST00000572176 NCKAP5LQ9HCH0 1330 aa20.31■□□□□ 0.84
ATP2A3-211ENST00000572176 PKD2Q13563 968 aa20.31■□□□□ 0.84
ATP2A3-211ENST00000572176 WASHC2CQ9Y4E1 1318 aa20.3■□□□□ 0.84
ATP2A3-211ENST00000572176 CROCC2H7BZ55 1655 aa20.3■□□□□ 0.84
ATP2A3-211ENST00000572176 MROH1Q8NDA8 1641 aa20.3■□□□□ 0.84
ATP2A3-211ENST00000572176 ABCC3O15438 1527 aa20.29■□□□□ 0.84
ATP2A3-211ENST00000572176 FBXO31Q5XUX0 539 aaPredicted RBP20.29■□□□□ 0.84
ATP2A3-211ENST00000572176 SHANK2Q9UPX8 1470 aa20.29■□□□□ 0.84
ATP2A3-211ENST00000572176 PTPN23Q9H3S7 1636 aa20.27■□□□□ 0.84
ATP2A3-211ENST00000572176 POLR1AO95602 1720 aaPredicted RBP20.27■□□□□ 0.83
ATP2A3-211ENST00000572176 DUOX2Q9NRD8 1548 aa20.27■□□□□ 0.83
ATP2A3-211ENST00000572176 NLRP1Q9C000 1473 aa20.26■□□□□ 0.83
ATP2A3-211ENST00000572176 NEURL4Q96JN8 1562 aa20.25■□□□□ 0.83
ATP2A3-211ENST00000572176 ABCC5O15440 1437 aa20.25■□□□□ 0.83
ATP2A3-211ENST00000572176 SPATA31D1Q6ZQQ2 1576 aa20.25■□□□□ 0.83
ATP2A3-211ENST00000572176 ZNF335Q9H4Z2 1342 aaPredicted RBP20.24■□□□□ 0.83
ATP2A3-211ENST00000572176 APLP2Q06481 763 aa20.23■□□□□ 0.83
ATP2A3-211ENST00000572176 FGD6Q6ZV73 1430 aa20.23■□□□□ 0.83
ATP2A3-211ENST00000572176 CEP152O94986 1710 aa20.22■□□□□ 0.83
ATP2A3-211ENST00000572176 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
ATP2A3-211ENST00000572176 UGGT1Q9NYU2 1555 aa20.21■□□□□ 0.83
ATP2A3-211ENST00000572176 DAPK1P53355 1430 aa20.21■□□□□ 0.83
ATP2A3-211ENST00000572176 ERBINQ96RT1 1412 aa20.21■□□□□ 0.83
ATP2A3-211ENST00000572176 KIF15Q9NS87 1388 aa20.21■□□□□ 0.83
ATP2A3-211ENST00000572176 ERVK-7P63135 1459 aa20.2■□□□□ 0.82
ATP2A3-211ENST00000572176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.18■□□□□ 0.82
ATP2A3-211ENST00000572176 DEPDC5O75140 1603 aa20.17■□□□□ 0.82
ATP2A3-211ENST00000572176 MED14O60244 1454 aa20.15■□□□□ 0.82
ATP2A3-211ENST00000572176 ARHGAP31Q2M1Z3 1444 aa20.14■□□□□ 0.81
ATP2A3-211ENST00000572176 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
ATP2A3-211ENST00000572176 ANKLE2Q86XL3 938 aa20.12■□□□□ 0.81
ATP2A3-211ENST00000572176 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
ATP2A3-211ENST00000572176 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
ATP2A3-211ENST00000572176 CPS1P31327 1500 aa20.12■□□□□ 0.81
ATP2A3-211ENST00000572176 NPHP4O75161 1426 aaPredicted RBP20.11■□□□□ 0.81
ATP2A3-211ENST00000572176 UBR1Q8IWV7 1749 aa20.1■□□□□ 0.81
ATP2A3-211ENST00000572176 IQGAP1P46940 1657 aa20.1■□□□□ 0.81
ATP2A3-211ENST00000572176 ANKRD30AQ9BXX3 1397 aa20.09■□□□□ 0.81
ATP2A3-211ENST00000572176 ADGRL2O95490 1459 aa20.09■□□□□ 0.81
ATP2A3-211ENST00000572176 LMTK2Q8IWU2 1503 aa20.08■□□□□ 0.81
ATP2A3-211ENST00000572176 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.8
ATP2A3-211ENST00000572176 UBAP1LF5GYI3 381 aa20.05■□□□□ 0.8
ATP2A3-211ENST00000572176 ARHGAP23Q9P227 1491 aa20.05■□□□□ 0.8
ATP2A3-211ENST00000572176 SLIT1O75093 1534 aa20.04■□□□□ 0.8
ATP2A3-211ENST00000572176 CHIC2Q9UKJ5 165 aa20.04■□□□□ 0.8
ATP2A3-211ENST00000572176 KANK1Q14678 1352 aa20.04■□□□□ 0.8
ATP2A3-211ENST00000572176 SCAF11Q99590 1463 aaKnown RBP20.03■□□□□ 0.8
ATP2A3-211ENST00000572176 PIK3C2BO00750 1634 aa20.02■□□□□ 0.8
ATP2A3-211ENST00000572176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.02■□□□□ 0.8
ATP2A3-211ENST00000572176 EFCAB6Q5THR3 1501 aa20.02■□□□□ 0.79
ATP2A3-211ENST00000572176 STRCP1A6NGW2 1772 aa20■□□□□ 0.79
ATP2A3-211ENST00000572176 DISP3Q9P2K9 1392 aa20■□□□□ 0.79
ATP2A3-211ENST00000572176 KDM5AP29375 1690 aaKnown RBP20■□□□□ 0.79
ATP2A3-211ENST00000572176 SYNMO15061 1565 aa19.99■□□□□ 0.79
ATP2A3-211ENST00000572176 FAM50AQ14320 339 aaKnown RBP19.98■□□□□ 0.79
ATP2A3-211ENST00000572176 NOS1P29475 1434 aa19.97■□□□□ 0.79
ATP2A3-211ENST00000572176 ANKRD50Q9ULJ7 1429 aa19.97■□□□□ 0.79
ATP2A3-211ENST00000572176 ALKQ9UM73 1620 aa19.96■□□□□ 0.79
ATP2A3-211ENST00000572176 LTKP29376 864 aa19.95■□□□□ 0.78
ATP2A3-211ENST00000572176 LRRC7Q96NW7 1537 aa19.95■□□□□ 0.78
ATP2A3-211ENST00000572176 TMEM2Q9UHN6 1383 aa19.95■□□□□ 0.78
ATP2A3-211ENST00000572176 RPRD2Q5VT52 1461 aaKnown RBP19.92■□□□□ 0.78
ATP2A3-211ENST00000572176 ADGRB3O60242 1522 aa19.92■□□□□ 0.78
ATP2A3-211ENST00000572176 UNC13BO14795 1591 aa19.92■□□□□ 0.78
ATP2A3-211ENST00000572176 TOM1O60784 492 aa19.92■□□□□ 0.78
ATP2A3-211ENST00000572176 TXNDC2Q86VQ3 553 aa19.92■□□□□ 0.78
ATP2A3-211ENST00000572176 TET3O43151 1660 aa19.91■□□□□ 0.78
ATP2A3-211ENST00000572176 IDI1Q13907 227 aa19.9■□□□□ 0.78
ATP2A3-211ENST00000572176 ILDR2Q71H61 639 aa19.89■□□□□ 0.77
ATP2A3-211ENST00000572176 EID1Q9Y6B2 187 aa19.89■□□□□ 0.77
ATP2A3-211ENST00000572176 GCC2Q8IWJ2 1684 aa19.88■□□□□ 0.77
ATP2A3-211ENST00000572176 ROCK1Q13464 1354 aa19.88■□□□□ 0.77
ATP2A3-211ENST00000572176 PIP4K2BP78356 416 aa19.88■□□□□ 0.77
ATP2A3-211ENST00000572176 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
ATP2A3-211ENST00000572176 STAG3Q9UJ98 1225 aa19.87■□□□□ 0.77
ATP2A3-211ENST00000572176 HSPA1LP34931 641 aa19.86■□□□□ 0.77
ATP2A3-211ENST00000572176 SLC52A1Q9NWF4 448 aa19.85■□□□□ 0.77
ATP2A3-211ENST00000572176 XIRP1Q702N8 1843 aaKnown RBP19.84■□□□□ 0.77
ATP2A3-211ENST00000572176 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.76
ATP2A3-211ENST00000572176 E9PCH4 1651 aa19.81■□□□□ 0.76
ATP2A3-211ENST00000572176 NWD1Q149M9 1564 aa19.8■□□□□ 0.76
ATP2A3-211ENST00000572176 MED1Q15648 1581 aaPredicted RBP19.8■□□□□ 0.76
ATP2A3-211ENST00000572176 ZFYVE9O95405 1425 aa19.8■□□□□ 0.76
ATP2A3-211ENST00000572176 MYO5BQ9ULV0 1848 aa19.8■□□□□ 0.76
ATP2A3-211ENST00000572176 TMEM131LA2VDJ0 1609 aa19.8■□□□□ 0.76
ATP2A3-211ENST00000572176 NKTRP30414 1462 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms