RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 HSP90AA2PQ14568 343 aaPredicted RBP17.38■□□□□ 0.37
TRPV1-206ENST00000571088 KIAA1107Q9UPP5 1409 aa17.38■□□□□ 0.37
TRPV1-206ENST00000571088 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
TRPV1-206ENST00000571088 GOLGA6L3A6NEY3 463 aa17.37■□□□□ 0.37
TRPV1-206ENST00000571088 CCDC144AA2RUR9 1427 aa17.37■□□□□ 0.37
TRPV1-206ENST00000571088 IQGAP2Q13576 1575 aa17.37■□□□□ 0.37
TRPV1-206ENST00000571088 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
TRPV1-206ENST00000571088 SMG6Q86US8 1419 aaKnown RBP17.36■□□□□ 0.37
TRPV1-206ENST00000571088 URB2Q14146 1524 aaKnown RBP17.36■□□□□ 0.37
TRPV1-206ENST00000571088 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
TRPV1-206ENST00000571088 FTSJ3Q8IY81 847 aaKnown RBP17.35■□□□□ 0.37
TRPV1-206ENST00000571088 CRBNQ96SW2 442 aa17.35■□□□□ 0.37
TRPV1-206ENST00000571088 BRD4O60885 1362 aaPredicted RBP17.35■□□□□ 0.37
TRPV1-206ENST00000571088 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
TRPV1-206ENST00000571088 RPRD2Q5VT52 1461 aaKnown RBP17.35■□□□□ 0.37
TRPV1-206ENST00000571088 DNTTIP2Q5QJE6 756 aaKnown RBP17.34■□□□□ 0.37
TRPV1-206ENST00000571088 PTMAP06454 111 aaKnown RBP17.34■□□□□ 0.37
TRPV1-206ENST00000571088 TROQ12816 1431 aaPredicted RBP17.33■□□□□ 0.37
TRPV1-206ENST00000571088 HSP90AB1P08238 724 aaKnown RBP17.33■□□□□ 0.36
TRPV1-206ENST00000571088 HSCBQ8IWL3 235 aa17.33■□□□□ 0.36
TRPV1-206ENST00000571088 PNISRQ8TF01 805 aaKnown RBP17.32■□□□□ 0.36
TRPV1-206ENST00000571088 TNNT2P45379 298 aaPredicted RBP17.32■□□□□ 0.36
TRPV1-206ENST00000571088 ABCC5O15440 1437 aa17.31■□□□□ 0.36
TRPV1-206ENST00000571088 MSNP26038 577 aaKnown RBP17.3■□□□□ 0.36
TRPV1-206ENST00000571088 PANK3Q9H999 370 aa17.3■□□□□ 0.36
TRPV1-206ENST00000571088 MYH16Q9H6N6 1097 aa17.3■□□□□ 0.36
TRPV1-206ENST00000571088 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
TRPV1-206ENST00000571088 CENPQQ7L2Z9 268 aaPredicted RBP17.29■□□□□ 0.36
TRPV1-206ENST00000571088 ARID3AQ99856 593 aa17.29■□□□□ 0.36
TRPV1-206ENST00000571088 TCOF1Q13428 1488 aaKnown RBP17.27■□□□□ 0.36
TRPV1-206ENST00000571088 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.36
TRPV1-206ENST00000571088 GOLGA2Q08379 1002 aa17.26■□□□□ 0.35
TRPV1-206ENST00000571088 CFAP53Q96M91 514 aa17.26■□□□□ 0.35
TRPV1-206ENST00000571088 MRC2Q9UBG0 1479 aa17.26■□□□□ 0.35
TRPV1-206ENST00000571088 BACH2Q9BYV9 841 aa17.26■□□□□ 0.35
TRPV1-206ENST00000571088 FRAT2O75474 233 aaPredicted RBP17.26■□□□□ 0.35
TRPV1-206ENST00000571088 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
TRPV1-206ENST00000571088 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
TRPV1-206ENST00000571088 KANK1Q14678 1352 aa17.24■□□□□ 0.35
TRPV1-206ENST00000571088 C9orf84Q5VXU9 1444 aa17.23■□□□□ 0.35
TRPV1-206ENST00000571088 PTPRGP23470 1445 aa17.23■□□□□ 0.35
TRPV1-206ENST00000571088 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRPV1-206ENST00000571088 TPRNQ4KMQ1 711 aa17.21■□□□□ 0.35
TRPV1-206ENST00000571088 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
TRPV1-206ENST00000571088 CAMSAP2Q08AD1 1489 aa17.2■□□□□ 0.34
TRPV1-206ENST00000571088 WASHC2CQ9Y4E1 1318 aa17.2■□□□□ 0.34
TRPV1-206ENST00000571088 GBP4Q96PP9 640 aa17.19■□□□□ 0.34
TRPV1-206ENST00000571088 EIF3AQ14152 1382 aaKnown RBP17.19■□□□□ 0.34
TRPV1-206ENST00000571088 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
TRPV1-206ENST00000571088 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
TRPV1-206ENST00000571088 PKNOX2Q96KN3 472 aa17.17■□□□□ 0.34
TRPV1-206ENST00000571088 SAMD9Q5K651 1589 aa17.17■□□□□ 0.34
TRPV1-206ENST00000571088 ZBTB7CA1YPR0 619 aa17.17■□□□□ 0.34
TRPV1-206ENST00000571088 CLUAP1Q96AJ1 413 aa17.17■□□□□ 0.34
TRPV1-206ENST00000571088 PLCB2Q00722 1185 aa17.16■□□□□ 0.34
TRPV1-206ENST00000571088 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
TRPV1-206ENST00000571088 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
TRPV1-206ENST00000571088 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
TRPV1-206ENST00000571088 SPAG9O60271 1321 aaKnown RBP17.13■□□□□ 0.33
TRPV1-206ENST00000571088 NBPF1Q3BBV0 1214 aa17.13■□□□□ 0.33
TRPV1-206ENST00000571088 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
TRPV1-206ENST00000571088 KIF21AQ7Z4S6 1674 aa17.12■□□□□ 0.33
TRPV1-206ENST00000571088 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
TRPV1-206ENST00000571088 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
TRPV1-206ENST00000571088 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
TRPV1-206ENST00000571088 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
TRPV1-206ENST00000571088 PLB1Q6P1J6 1458 aa17.1■□□□□ 0.33
TRPV1-206ENST00000571088 STAG3Q9UJ98 1225 aa17.1■□□□□ 0.33
TRPV1-206ENST00000571088 COG6Q9Y2V7 657 aa17.1■□□□□ 0.33
TRPV1-206ENST00000571088 WDR62O43379 1518 aa17.09■□□□□ 0.33
TRPV1-206ENST00000571088 CENPJQ9HC77 1338 aaPredicted RBP17.09■□□□□ 0.33
TRPV1-206ENST00000571088 GRIN2AQ12879 1464 aa17.09■□□□□ 0.33
TRPV1-206ENST00000571088 STAC3Q96MF2 364 aa17.09■□□□□ 0.33
TRPV1-206ENST00000571088 ADAMTS8Q9UP79 889 aa17.09■□□□□ 0.33
TRPV1-206ENST00000571088 GCC2Q8IWJ2 1684 aa17.09■□□□□ 0.33
TRPV1-206ENST00000571088 SENP3Q9H4L4 574 aaPredicted RBP17.08■□□□□ 0.33
TRPV1-206ENST00000571088 ABCA5Q8WWZ7 1642 aa17.08■□□□□ 0.33
TRPV1-206ENST00000571088 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
TRPV1-206ENST00000571088 DDX11L8A8MPP1 907 aa17.07■□□□□ 0.32
TRPV1-206ENST00000571088 GPATCH8Q9UKJ3 1502 aaKnown RBP17.07■□□□□ 0.32
TRPV1-206ENST00000571088 E9PSI1 815 aa17.07■□□□□ 0.32
TRPV1-206ENST00000571088 NUP153P49790 1475 aaKnown RBP17.07■□□□□ 0.32
TRPV1-206ENST00000571088 KIF3BO15066 747 aa17.07■□□□□ 0.32
TRPV1-206ENST00000571088 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
TRPV1-206ENST00000571088 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
TRPV1-206ENST00000571088 UBE2Q2Q8WVN8 375 aa17.06■□□□□ 0.32
TRPV1-206ENST00000571088 TEX14Q8IWB6 1497 aa17.06■□□□□ 0.32
TRPV1-206ENST00000571088 APAF1O14727 1248 aa17.06■□□□□ 0.32
TRPV1-206ENST00000571088 RAPGEF6Q8TEU7 1601 aa17.05■□□□□ 0.32
TRPV1-206ENST00000571088 MAGI3Q5TCQ9 1506 aa17.05■□□□□ 0.32
TRPV1-206ENST00000571088 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
TRPV1-206ENST00000571088 BCL2L13Q9BXK5 485 aa17.05■□□□□ 0.32
TRPV1-206ENST00000571088 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
TRPV1-206ENST00000571088 RALGAPBQ86X10 1494 aa17.04■□□□□ 0.32
TRPV1-206ENST00000571088 CGNL1Q0VF96 1302 aa17.04■□□□□ 0.32
TRPV1-206ENST00000571088 ITPRIPQ8IWB1 547 aa17.04■□□□□ 0.32
TRPV1-206ENST00000571088 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
TRPV1-206ENST00000571088 PTMSP20962 102 aa17.03■□□□□ 0.32
TRPV1-206ENST00000571088 DHX29Q7Z478 1369 aaKnown RBP17.03■□□□□ 0.32
TRPV1-206ENST00000571088 ARHGEF11O15085 1522 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms