RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 CCDC144AA2RUR9 1427 aa20.12■□□□□ 0.81
USP43-202ENST00000570475 ADAMTS8Q9UP79 889 aa20.11■□□□□ 0.81
USP43-202ENST00000570475 PZPP20742 1482 aa20.11■□□□□ 0.81
USP43-202ENST00000570475 C9orf84Q5VXU9 1444 aa20.1■□□□□ 0.81
USP43-202ENST00000570475 C20orf194Q5TEA3 1177 aa20.1■□□□□ 0.81
USP43-202ENST00000570475 KIAA0586Q9BVV6 1533 aa20.09■□□□□ 0.81
USP43-202ENST00000570475 ARXQ96QS3 562 aa20.09■□□□□ 0.81
USP43-202ENST00000570475 WDR62O43379 1518 aa20.09■□□□□ 0.81
USP43-202ENST00000570475 BRD4O60885 1362 aaPredicted RBP20.08■□□□□ 0.81
USP43-202ENST00000570475 ARHGEF11O15085 1522 aa20.08■□□□□ 0.81
USP43-202ENST00000570475 GPATCH8Q9UKJ3 1502 aaKnown RBP20.08■□□□□ 0.8
USP43-202ENST00000570475 KIF21AQ7Z4S6 1674 aa20.06■□□□□ 0.8
USP43-202ENST00000570475 FRAT1Q92837 279 aaPredicted RBP20.06■□□□□ 0.8
USP43-202ENST00000570475 ARID4BQ4LE39 1312 aaPredicted RBP20.05■□□□□ 0.8
USP43-202ENST00000570475 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
USP43-202ENST00000570475 PDE3BQ13370 1112 aa20.03■□□□□ 0.8
USP43-202ENST00000570475 GCC2Q8IWJ2 1684 aa20.03■□□□□ 0.8
USP43-202ENST00000570475 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.02■□□□□ 0.8
USP43-202ENST00000570475 DISP1Q96F81 1524 aa20.01■□□□□ 0.79
USP43-202ENST00000570475 PTPRGP23470 1445 aa20■□□□□ 0.79
USP43-202ENST00000570475 IL27Q8NEV9 243 aa20■□□□□ 0.79
USP43-202ENST00000570475 BACH2Q9BYV9 841 aa20■□□□□ 0.79
USP43-202ENST00000570475 APAF1O14727 1248 aa19.99■□□□□ 0.79
USP43-202ENST00000570475 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
USP43-202ENST00000570475 GOLGA2Q08379 1002 aa19.98■□□□□ 0.79
USP43-202ENST00000570475 RRP7AQ9Y3A4 280 aaKnown RBP19.98■□□□□ 0.79
USP43-202ENST00000570475 DISP3Q9P2K9 1392 aa19.96■□□□□ 0.79
USP43-202ENST00000570475 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
USP43-202ENST00000570475 DNMT1P26358 1616 aaKnown RBP19.96■□□□□ 0.79
USP43-202ENST00000570475 PPM1GO15355 546 aaPredicted RBP19.96■□□□□ 0.79
USP43-202ENST00000570475 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
USP43-202ENST00000570475 DDRGK1Q96HY6 314 aa19.96■□□□□ 0.79
USP43-202ENST00000570475 TARBP1Q13395 1621 aaKnown RBP19.95■□□□□ 0.78
USP43-202ENST00000570475 RAPGEF6Q8TEU7 1601 aa19.94■□□□□ 0.78
USP43-202ENST00000570475 BCL2L13Q9BXK5 485 aa19.94■□□□□ 0.78
USP43-202ENST00000570475 RNF123Q5XPI4 1314 aa19.93■□□□□ 0.78
USP43-202ENST00000570475 PPP2R1AP30153 589 aa19.92■□□□□ 0.78
USP43-202ENST00000570475 AFAP1Q8N556 730 aa19.92■□□□□ 0.78
USP43-202ENST00000570475 KIAA0556O60303 1618 aa19.92■□□□□ 0.78
USP43-202ENST00000570475 SAFB2Q14151 953 aaKnown RBP eCLIP19.92■□□□□ 0.78
USP43-202ENST00000570475 KIF14Q15058 1648 aa19.92■□□□□ 0.78
USP43-202ENST00000570475 NUTM2DQ5VT03 806 aaPredicted RBP19.92■□□□□ 0.78
USP43-202ENST00000570475 CLUAP1Q96AJ1 413 aa19.92■□□□□ 0.78
USP43-202ENST00000570475 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.92■□□□□ 0.78
USP43-202ENST00000570475 BCORL1Q5H9F3 1711 aa19.91■□□□□ 0.78
USP43-202ENST00000570475 PER1O15534 1290 aaPredicted RBP19.91■□□□□ 0.78
USP43-202ENST00000570475 EIF5BO60841 1220 aaKnown RBP19.91■□□□□ 0.78
USP43-202ENST00000570475 BCAR3O75815 825 aa19.91■□□□□ 0.78
USP43-202ENST00000570475 SPRYD3Q8NCJ5 442 aa19.9■□□□□ 0.78
USP43-202ENST00000570475 MAGI1Q96QZ7 1491 aaPredicted RBP19.9■□□□□ 0.78
USP43-202ENST00000570475 KIF3BO15066 747 aa19.9■□□□□ 0.78
USP43-202ENST00000570475 CDCA8Q53HL2 280 aa19.89■□□□□ 0.77
USP43-202ENST00000570475 PBRM1Q86U86 1689 aa19.88■□□□□ 0.77
USP43-202ENST00000570475 SLKQ9H2G2 1235 aaPredicted RBP19.88■□□□□ 0.77
USP43-202ENST00000570475 RALGAPBQ86X10 1494 aa19.88■□□□□ 0.77
USP43-202ENST00000570475 COG6Q9Y2V7 657 aa19.88■□□□□ 0.77
USP43-202ENST00000570475 MS4A1P11836 297 aa19.87■□□□□ 0.77
USP43-202ENST00000570475 TESK2Q96S53 571 aa19.87■□□□□ 0.77
USP43-202ENST00000570475 EFCAB2Q5VUJ9 269 aa19.86■□□□□ 0.77
USP43-202ENST00000570475 RSPH4AQ5TD94 716 aa19.86■□□□□ 0.77
USP43-202ENST00000570475 ATP10BO94823 1461 aa19.86■□□□□ 0.77
USP43-202ENST00000570475 LRPPRCP42704 1394 aaKnown RBP19.86■□□□□ 0.77
USP43-202ENST00000570475 ERBINQ96RT1 1412 aa19.85■□□□□ 0.77
USP43-202ENST00000570475 CFAP70Q5T0N1 1121 aa19.85■□□□□ 0.77
USP43-202ENST00000570475 TRAK1Q9UPV9 953 aa19.84■□□□□ 0.77
USP43-202ENST00000570475 PANK1Q8TE04 598 aa19.84■□□□□ 0.77
USP43-202ENST00000570475 SPAG9O60271 1321 aaKnown RBP19.84■□□□□ 0.77
USP43-202ENST00000570475 CENPQQ7L2Z9 268 aaPredicted RBP19.83■□□□□ 0.76
USP43-202ENST00000570475 NFKBIBQ15653 356 aa19.82■□□□□ 0.76
USP43-202ENST00000570475 PARD3Q8TEW0 1356 aa19.82■□□□□ 0.76
USP43-202ENST00000570475 FAM161AQ3B820 660 aa19.81■□□□□ 0.76
USP43-202ENST00000570475 MORC1Q86VD1 984 aa19.81■□□□□ 0.76
USP43-202ENST00000570475 ARHGAP5Q13017 1502 aa19.81■□□□□ 0.76
USP43-202ENST00000570475 BRPF3Q9ULD4 1205 aa19.81■□□□□ 0.76
USP43-202ENST00000570475 PLEKHH2Q8IVE3 1493 aa19.81■□□□□ 0.76
USP43-202ENST00000570475 ANO8Q9HCE9 1232 aaPredicted RBP19.8■□□□□ 0.76
USP43-202ENST00000570475 GGT6Q6P531 493 aa19.79■□□□□ 0.76
USP43-202ENST00000570475 DUSP27Q5VZP5 1158 aa19.79■□□□□ 0.76
USP43-202ENST00000570475 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
USP43-202ENST00000570475 PRAG1Q86YV5 1406 aa19.78■□□□□ 0.76
USP43-202ENST00000570475 KDM5CP41229 1560 aa19.78■□□□□ 0.76
USP43-202ENST00000570475 SPINK5Q9NQ38 1064 aaPredicted RBP19.78■□□□□ 0.76
USP43-202ENST00000570475 U2SURPO15042 1029 aaKnown RBP19.76■□□□□ 0.75
USP43-202ENST00000570475 FRAT2O75474 233 aaPredicted RBP19.76■□□□□ 0.75
USP43-202ENST00000570475 MBD5Q9P267 1494 aa19.76■□□□□ 0.75
USP43-202ENST00000570475 PLEKHH1Q9ULM0 1364 aa19.76■□□□□ 0.75
USP43-202ENST00000570475 UHRF1BP1Q6BDS2 1440 aa19.76■□□□□ 0.75
USP43-202ENST00000570475 UPF2Q9HAU5 1272 aaKnown RBP19.76■□□□□ 0.75
USP43-202ENST00000570475 TMEM132EQ6IEE7 984 aa19.75■□□□□ 0.75
USP43-202ENST00000570475 CCDC141Q6ZP82 1450 aa19.75■□□□□ 0.75
USP43-202ENST00000570475 GSE1Q14687 1217 aa19.74■□□□□ 0.75
USP43-202ENST00000570475 CENPJQ9HC77 1338 aaPredicted RBP19.74■□□□□ 0.75
USP43-202ENST00000570475 STK26Q9P289 416 aa19.73■□□□□ 0.75
USP43-202ENST00000570475 U2AF1L5P0DN76 240 aaPredicted RBP19.72■□□□□ 0.75
USP43-202ENST00000570475 U2AF1Q01081 240 aaKnown RBP eCLIP19.72■□□□□ 0.75
USP43-202ENST00000570475 FAM135AQ9P2D6 1515 aa19.72■□□□□ 0.75
USP43-202ENST00000570475 ADGRL2O95490 1459 aa19.72■□□□□ 0.75
USP43-202ENST00000570475 WASHC2CQ9Y4E1 1318 aa19.71■□□□□ 0.75
USP43-202ENST00000570475 FTSJ3Q8IY81 847 aaKnown RBP19.71■□□□□ 0.75
USP43-202ENST00000570475 DMRT2Q9Y5R5 561 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms