RNA–Protein interactions for RNA: ENST00000570415.5

ITGAE-203, Transcript of integrin subunit alpha E, humanhuman

TSL 3

Gene ITGAE, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-203ENST00000570415 ABCC2Q92887 1545 aa17.1■□□□□ 0.33
ITGAE-203ENST00000570415 IGF1RP08069 1367 aa17.09■□□□□ 0.33
ITGAE-203ENST00000570415 COL17A1Q9UMD9 1497 aaPredicted RBP17.07■□□□□ 0.32
ITGAE-203ENST00000570415 ASXL2Q76L83 1435 aa17.07■□□□□ 0.32
ITGAE-203ENST00000570415 PTPRGP23470 1445 aa17.06■□□□□ 0.32
ITGAE-203ENST00000570415 C3orf67Q6ZVT6 689 aa17.06■□□□□ 0.32
ITGAE-203ENST00000570415 HECW2Q9P2P5 1572 aa17.05■□□□□ 0.32
ITGAE-203ENST00000570415 GLI2P10070 1586 aa17.04■□□□□ 0.32
ITGAE-203ENST00000570415 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
ITGAE-203ENST00000570415 MAP3K4Q9Y6R4 1608 aa17.03■□□□□ 0.32
ITGAE-203ENST00000570415 IQGAP2Q13576 1575 aa17.02■□□□□ 0.32
ITGAE-203ENST00000570415 LHX8Q68G74 356 aa17.02■□□□□ 0.32
ITGAE-203ENST00000570415 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
ITGAE-203ENST00000570415 ZCCHC11Q5TAX3 1644 aaKnown RBP17■□□□□ 0.31
ITGAE-203ENST00000570415 EIF2AK3Q9NZJ5 1116 aaKnown RBP17■□□□□ 0.31
ITGAE-203ENST00000570415 DISP1Q96F81 1524 aa17■□□□□ 0.31
ITGAE-203ENST00000570415 TNIKQ9UKE5 1360 aa17■□□□□ 0.31
ITGAE-203ENST00000570415 TMEM92Q6UXU6 159 aa16.98■□□□□ 0.31
ITGAE-203ENST00000570415 MAMSTRQ6ZN01 415 aa16.98■□□□□ 0.31
ITGAE-203ENST00000570415 SCUBE2Q9NQ36 999 aa16.98■□□□□ 0.31
ITGAE-203ENST00000570415 PLB1Q6P1J6 1458 aa16.98■□□□□ 0.31
ITGAE-203ENST00000570415 NCKAP5LQ9HCH0 1330 aa16.97■□□□□ 0.31
ITGAE-203ENST00000570415 EPRSP07814 1512 aaKnown RBP16.97■□□□□ 0.31
ITGAE-203ENST00000570415 CRISPLD2Q9H0B8 497 aa16.96■□□□□ 0.31
ITGAE-203ENST00000570415 UHRF1BP1LA0JNW5 1464 aa16.96■□□□□ 0.31
ITGAE-203ENST00000570415 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
ITGAE-203ENST00000570415 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
ITGAE-203ENST00000570415 UACAQ9BZF9 1416 aa16.94■□□□□ 0.3
ITGAE-203ENST00000570415 PDE4AP27815 886 aa16.93■□□□□ 0.3
ITGAE-203ENST00000570415 TMC2Q8TDI7 906 aa16.92■□□□□ 0.3
ITGAE-203ENST00000570415 KIAA0556O60303 1618 aa16.92■□□□□ 0.3
ITGAE-203ENST00000570415 KDM5BQ9UGL1 1544 aa16.91■□□□□ 0.3
ITGAE-203ENST00000570415 KIF3CO14782 793 aa16.91■□□□□ 0.3
ITGAE-203ENST00000570415 VSIG10Q8N0Z9 540 aa16.91■□□□□ 0.3
ITGAE-203ENST00000570415 GPHNQ9NQX3 736 aaPredicted RBP16.91■□□□□ 0.3
ITGAE-203ENST00000570415 C2orf72A6NCS6 295 aa16.9■□□□□ 0.3
ITGAE-203ENST00000570415 OTUD5Q96G74 571 aa16.9■□□□□ 0.3
ITGAE-203ENST00000570415 KDM2AQ9Y2K7 1162 aa16.9■□□□□ 0.3
ITGAE-203ENST00000570415 LARP6Q9BRS8 491 aaKnown RBP16.89■□□□□ 0.29
ITGAE-203ENST00000570415 KIF21BO75037 1637 aa16.88■□□□□ 0.29
ITGAE-203ENST00000570415 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
ITGAE-203ENST00000570415 SLAIN1Q8ND83 568 aa16.86■□□□□ 0.29
ITGAE-203ENST00000570415 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
ITGAE-203ENST00000570415 MFSD10Q14728 455 aa16.85■□□□□ 0.29
ITGAE-203ENST00000570415 DDX27Q96GQ7 796 aaKnown RBP16.83■□□□□ 0.28
ITGAE-203ENST00000570415 WDR7Q9Y4E6 1490 aa16.83■□□□□ 0.28
ITGAE-203ENST00000570415 FOXK1P85037 733 aa16.81■□□□□ 0.28
ITGAE-203ENST00000570415 DSG2Q14126 1118 aa16.81■□□□□ 0.28
ITGAE-203ENST00000570415 PPP1R15BQ5SWA1 713 aa16.8■□□□□ 0.28
ITGAE-203ENST00000570415 CTTNBP2Q8WZ74 1663 aa16.8■□□□□ 0.28
ITGAE-203ENST00000570415 CFAP43Q8NDM7 1665 aa16.79■□□□□ 0.28
ITGAE-203ENST00000570415 WDR70Q9NW82 654 aa16.79■□□□□ 0.28
ITGAE-203ENST00000570415 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
ITGAE-203ENST00000570415 ABCA8O94911 1581 aa16.76■□□□□ 0.27
ITGAE-203ENST00000570415 PLPP6Q8IY26 295 aa16.75■□□□□ 0.27
ITGAE-203ENST00000570415 CD109Q6YHK3 1445 aa16.73■□□□□ 0.27
ITGAE-203ENST00000570415 MAGI3Q5TCQ9 1506 aa16.73■□□□□ 0.27
ITGAE-203ENST00000570415 KCNH8Q96L42 1107 aa16.72■□□□□ 0.27
ITGAE-203ENST00000570415 ARID3CA6NKF2 412 aa16.7■□□□□ 0.26
ITGAE-203ENST00000570415 ADAMTSL3P82987 1691 aa16.66■□□□□ 0.26
ITGAE-203ENST00000570415 E2F4Q16254 413 aa16.66■□□□□ 0.26
ITGAE-203ENST00000570415 CAMK2BQ13554 666 aa16.65■□□□□ 0.26
ITGAE-203ENST00000570415 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
ITGAE-203ENST00000570415 MADDQ8WXG6 1647 aa16.63■□□□□ 0.25
ITGAE-203ENST00000570415 PTPRMP28827 1452 aa16.62■□□□□ 0.25
ITGAE-203ENST00000570415 HOXB3P14651 431 aaPredicted RBP16.61■□□□□ 0.25
ITGAE-203ENST00000570415 ARAP3Q8WWN8 1544 aa16.6■□□□□ 0.25
ITGAE-203ENST00000570415 ABCA9Q8IUA7 1624 aa16.6■□□□□ 0.25
ITGAE-203ENST00000570415 BCORL1Q5H9F3 1711 aa16.6■□□□□ 0.25
ITGAE-203ENST00000570415 KCNV2Q8TDN2 545 aa16.6■□□□□ 0.25
ITGAE-203ENST00000570415 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
ITGAE-203ENST00000570415 FBXO41Q8TF61 875 aa16.59■□□□□ 0.25
ITGAE-203ENST00000570415 EMILIN3Q9NT22 766 aa16.59■□□□□ 0.25
ITGAE-203ENST00000570415 P3H3Q8IVL6 736 aa16.58■□□□□ 0.24
ITGAE-203ENST00000570415 ATP10BO94823 1461 aa16.58■□□□□ 0.24
ITGAE-203ENST00000570415 RIMS1Q86UR5 1692 aaKnown RBP16.57■□□□□ 0.24
ITGAE-203ENST00000570415 SNPHO15079 494 aa16.57■□□□□ 0.24
ITGAE-203ENST00000570415 SLC34A2O95436 690 aa16.57■□□□□ 0.24
ITGAE-203ENST00000570415 DOK7Q18PE1 504 aa16.57■□□□□ 0.24
ITGAE-203ENST00000570415 SIGLEC1Q9BZZ2 1709 aa16.56■□□□□ 0.24
ITGAE-203ENST00000570415 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
ITGAE-203ENST00000570415 RAPGEF3O95398 923 aa16.56■□□□□ 0.24
ITGAE-203ENST00000570415 LMTK3Q96Q04 1460 aa16.55■□□□□ 0.24
ITGAE-203ENST00000570415 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
ITGAE-203ENST00000570415 PRXQ9BXM0 1461 aa16.54■□□□□ 0.24
ITGAE-203ENST00000570415 OXER1Q8TDS5 423 aa16.53■□□□□ 0.24
ITGAE-203ENST00000570415 PTCD2Q8WV60 388 aaKnown RBP16.53■□□□□ 0.24
ITGAE-203ENST00000570415 RAPGEF6Q8TEU7 1601 aa16.52■□□□□ 0.23
ITGAE-203ENST00000570415 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
ITGAE-203ENST00000570415 ARHGEF40Q8TER5 1519 aa16.5■□□□□ 0.23
ITGAE-203ENST00000570415 RIMBP2O15034 1052 aa16.49■□□□□ 0.23
ITGAE-203ENST00000570415 RICTORQ6R327 1708 aa16.49■□□□□ 0.23
ITGAE-203ENST00000570415 ZNF710Q8N1W2 664 aa16.49■□□□□ 0.23
ITGAE-203ENST00000570415 ARIH1Q9Y4X5 557 aaPredicted RBP16.49■□□□□ 0.23
ITGAE-203ENST00000570415 DPYSL4O14531 572 aa16.48■□□□□ 0.23
ITGAE-203ENST00000570415 ARHGEF1Q92888 912 aaKnown RBP16.48■□□□□ 0.23
ITGAE-203ENST00000570415 PCDHGA4Q9Y5G9 962 aa16.48■□□□□ 0.23
ITGAE-203ENST00000570415 ZSWIM6Q9HCJ5 1215 aa16.46■□□□□ 0.23
ITGAE-203ENST00000570415 NEO1Q92859 1461 aa16.46■□□□□ 0.23
ITGAE-203ENST00000570415 HSPA2P54652 639 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms