RNA–Protein interactions for RNA: ENST00000570199.1

EPB42-209, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-209ENST00000570199 EMILIN3Q9NT22 766 aa8.2□□□□□ -1.1
EPB42-209ENST00000570199 PDE4AP27815 886 aa8.19□□□□□ -1.1
EPB42-209ENST00000570199 NYAP1Q6ZVC0 841 aa8.19□□□□□ -1.1
EPB42-209ENST00000570199 KIAA1468Q9P260 1216 aa8.19□□□□□ -1.1
EPB42-209ENST00000570199 SEPT9Q9UHD8 586 aaPredicted RBP8.19□□□□□ -1.1
EPB42-209ENST00000570199 MAP3K9P80192 1104 aa8.16□□□□□ -1.1
EPB42-209ENST00000570199 MFSD10Q14728 455 aa8.16□□□□□ -1.1
EPB42-209ENST00000570199 TRAF7Q6Q0C0 670 aa8.16□□□□□ -1.1
EPB42-209ENST00000570199 LARP6Q9BRS8 491 aaKnown RBP8.16□□□□□ -1.1
EPB42-209ENST00000570199 GFRA3O60609 400 aa8.15□□□□□ -1.1
EPB42-209ENST00000570199 LAPTM4AQ15012 233 aa8.15□□□□□ -1.1
EPB42-209ENST00000570199 TYW1BQ6NUM6 668 aa8.15□□□□□ -1.1
EPB42-209ENST00000570199 DDX27Q96GQ7 796 aaKnown RBP8.15□□□□□ -1.1
EPB42-209ENST00000570199 PHF14O94880 888 aa8.13□□□□□ -1.11
EPB42-209ENST00000570199 FBXW7Q969H0 707 aa8.13□□□□□ -1.11
EPB42-209ENST00000570199 HPS5Q9UPZ3 1129 aa8.13□□□□□ -1.11
EPB42-209ENST00000570199 ONECUT3O60422 494 aaPredicted RBP8.12□□□□□ -1.11
EPB42-209ENST00000570199 TSR3Q9UJK0 312 aaKnown RBP8.12□□□□□ -1.11
EPB42-209ENST00000570199 TRIM6-TRIM34B2RNG4 842 aa8.11□□□□□ -1.11
EPB42-209ENST00000570199 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
EPB42-209ENST00000570199 C6orf132Q5T0Z8 1188 aa8.11□□□□□ -1.11
EPB42-209ENST00000570199 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.11□□□□□ -1.11
EPB42-209ENST00000570199 RYDENQ9NUL5 291 aaKnown RBP8.1□□□□□ -1.11
EPB42-209ENST00000570199 NRG2O14511 850 aaPredicted RBP8.08□□□□□ -1.12
EPB42-209ENST00000570199 GTPBP6O43824 516 aaPredicted RBP8.08□□□□□ -1.12
EPB42-209ENST00000570199 TJAP1Q5JTD0 557 aa8.08□□□□□ -1.12
EPB42-209ENST00000570199 LRCH3Q96II8 777 aa8.08□□□□□ -1.12
EPB42-209ENST00000570199 PRKD2Q9BZL6 878 aa8.08□□□□□ -1.12
EPB42-209ENST00000570199 CADPS2Q86UW7 1296 aa8.05□□□□□ -1.12
EPB42-209ENST00000570199 TSKSQ9UJT2 592 aa8.05□□□□□ -1.12
EPB42-209ENST00000570199 PPP1R18Q6NYC8 613 aa8.04□□□□□ -1.12
EPB42-209ENST00000570199 RBM33Q96EV2 1170 aaKnown RBP8.04□□□□□ -1.12
EPB42-209ENST00000570199 EPAS1Q99814 870 aa8.04□□□□□ -1.12
EPB42-209ENST00000570199 MTRQ99707 1265 aa8.02□□□□□ -1.13
EPB42-209ENST00000570199 DPYSL4O14531 572 aa8.01□□□□□ -1.13
EPB42-209ENST00000570199 V9GY48 417 aaPredicted RBP8.01□□□□□ -1.13
EPB42-209ENST00000570199 C3orf80F5H4A9 247 aa8□□□□□ -1.13
EPB42-209ENST00000570199 PPP4CP60510 307 aa8□□□□□ -1.13
EPB42-209ENST00000570199 CAMK2BQ13554 666 aa8□□□□□ -1.13
EPB42-209ENST00000570199 TSR1Q2NL82 804 aaKnown RBP8□□□□□ -1.13
EPB42-209ENST00000570199 ZNF787Q6DD87 383 aa8□□□□□ -1.13
EPB42-209ENST00000570199 ZNF516Q92618 1163 aa8□□□□□ -1.13
EPB42-209ENST00000570199 DDX12PQ92771 950 aa8□□□□□ -1.13
EPB42-209ENST00000570199 ZNF775Q96BV0 537 aaPredicted RBP8□□□□□ -1.13
EPB42-209ENST00000570199 SMAPO00193 183 aa7.99□□□□□ -1.13
EPB42-209ENST00000570199 SAMD7Q7Z3H4 446 aa7.99□□□□□ -1.13
EPB42-209ENST00000570199 FAM198AQ9UFP1 575 aa7.99□□□□□ -1.13
EPB42-209ENST00000570199 IL21Q9HBE4 155 aa7.97□□□□□ -1.13
EPB42-209ENST00000570199 EN1Q05925 392 aaPredicted RBP7.96□□□□□ -1.14
EPB42-209ENST00000570199 NKX2-3Q8TAU0 364 aa7.96□□□□□ -1.14
EPB42-209ENST00000570199 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.96□□□□□ -1.14
EPB42-209ENST00000570199 PDZRN3Q9UPQ7 1066 aa7.96□□□□□ -1.14
EPB42-209ENST00000570199 PACS2Q86VP3 889 aa7.95□□□□□ -1.14
EPB42-209ENST00000570199 NBR1Q14596 966 aa7.94□□□□□ -1.14
EPB42-209ENST00000570199 MAP3K7O43318 606 aa7.93□□□□□ -1.14
EPB42-209ENST00000570199 PRIM1P49642 420 aaKnown RBP7.93□□□□□ -1.14
EPB42-209ENST00000570199 APLP1P51693 650 aa7.93□□□□□ -1.14
EPB42-209ENST00000570199 CDCA7LQ96GN5 454 aa7.93□□□□□ -1.14
EPB42-209ENST00000570199 TRIM67Q6ZTA4 783 aa7.92□□□□□ -1.14
EPB42-209ENST00000570199 PRSS12P56730 875 aa7.89□□□□□ -1.15
EPB42-209ENST00000570199 POTECB2RU33 542 aa7.88□□□□□ -1.15
EPB42-209ENST00000570199 PDIA6Q15084 440 aa7.88□□□□□ -1.15
EPB42-209ENST00000570199 TATDN2Q93075 761 aa7.88□□□□□ -1.15
EPB42-209ENST00000570199 EMID1Q96A84 441 aaPredicted RBP7.88□□□□□ -1.15
EPB42-209ENST00000570199 PNMA3Q9UL41 463 aa7.87□□□□□ -1.15
EPB42-209ENST00000570199 RNF40O75150 1001 aa7.86□□□□□ -1.15
EPB42-209ENST00000570199 COPS2P61201 443 aa7.86□□□□□ -1.15
EPB42-209ENST00000570199 NBPF26B4DH59 902 aa7.85□□□□□ -1.15
EPB42-209ENST00000570199 MYT1Q01538 1121 aa7.84□□□□□ -1.15
EPB42-209ENST00000570199 CDHR5Q9HBB8 845 aa7.84□□□□□ -1.15
EPB42-209ENST00000570199 NUDT18Q6ZVK8 323 aa7.83□□□□□ -1.16
EPB42-209ENST00000570199 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
EPB42-209ENST00000570199 TMUB1Q9BVT8 246 aa7.82□□□□□ -1.16
EPB42-209ENST00000570199 ZPR1O75312 459 aa7.81□□□□□ -1.16
EPB42-209ENST00000570199 RNF223E7ERA6 249 aa7.8□□□□□ -1.16
EPB42-209ENST00000570199 GGCXP38435 758 aa7.8□□□□□ -1.16
EPB42-209ENST00000570199 SWT1Q5T5J6 900 aaKnown RBP7.8□□□□□ -1.16
EPB42-209ENST00000570199 CERKQ8TCT0 537 aa7.8□□□□□ -1.16
EPB42-209ENST00000570199 SLC19A1P41440 591 aa7.79□□□□□ -1.16
EPB42-209ENST00000570199 PKDCCQ504Y2 493 aa7.79□□□□□ -1.16
EPB42-209ENST00000570199 SPRYD7Q5W111 196 aa7.78□□□□□ -1.16
EPB42-209ENST00000570199 TTC13Q8NBP0 860 aa7.78□□□□□ -1.16
EPB42-209ENST00000570199 TLL1O43897 1013 aa7.77□□□□□ -1.17
EPB42-209ENST00000570199 DGAT1O75907 488 aa7.77□□□□□ -1.17
EPB42-209ENST00000570199 PRR20EP86478 221 aa7.77□□□□□ -1.17
EPB42-209ENST00000570199 PRR20CP86479 221 aa7.77□□□□□ -1.17
EPB42-209ENST00000570199 PRR20DP86480 221 aa7.77□□□□□ -1.17
EPB42-209ENST00000570199 PRR20BP86481 221 aa7.77□□□□□ -1.17
EPB42-209ENST00000570199 PRR20AP86496 221 aa7.77□□□□□ -1.17
EPB42-209ENST00000570199 RTN4Q9NQC3 1192 aaKnown RBP7.77□□□□□ -1.17
EPB42-209ENST00000570199 RBM27Q9P2N5 1060 aaKnown RBP7.77□□□□□ -1.17
EPB42-209ENST00000570199 GRXCR2A6NFK2 248 aa7.76□□□□□ -1.17
EPB42-209ENST00000570199 SPDYE16A6NNV3 312 aaPredicted RBP7.76□□□□□ -1.17
EPB42-209ENST00000570199 OSBPP22059 807 aa7.76□□□□□ -1.17
EPB42-209ENST00000570199 BLOC1S3Q6QNY0 202 aa7.75□□□□□ -1.17
EPB42-209ENST00000570199 PPEF1O14829 653 aaPredicted RBP7.74□□□□□ -1.17
EPB42-209ENST00000570199 ST8SIA5O15466 376 aa7.74□□□□□ -1.17
EPB42-209ENST00000570199 GDF9O60383 454 aa7.74□□□□□ -1.17
EPB42-209ENST00000570199 HDGFP51858 240 aaKnown RBP7.74□□□□□ -1.17
EPB42-209ENST00000570199 TREML4Q6UXN2 200 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms