RNA–Protein interactions for RNA: ENST00000569957.5

INO80E-213, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 4,469 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-213ENST00000569957 ROCK1Q13464 1354 aa16.47■□□□□ 0.23
INO80E-213ENST00000569957 ARHGEF11O15085 1522 aa16.46■□□□□ 0.23
INO80E-213ENST00000569957 PPP4R2Q9NY27 417 aa16.46■□□□□ 0.23
INO80E-213ENST00000569957 WASHC2CQ9Y4E1 1318 aa16.46■□□□□ 0.23
INO80E-213ENST00000569957 ANKRD50Q9ULJ7 1429 aa16.46■□□□□ 0.23
INO80E-213ENST00000569957 ARHGAP5Q13017 1502 aa16.44■□□□□ 0.22
INO80E-213ENST00000569957 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
INO80E-213ENST00000569957 DAPK1P53355 1430 aa16.44■□□□□ 0.22
INO80E-213ENST00000569957 CCDC146Q8IYE0 955 aa16.43■□□□□ 0.22
INO80E-213ENST00000569957 AFAP1Q8N556 730 aa16.43■□□□□ 0.22
INO80E-213ENST00000569957 ITSN2Q9NZM3 1697 aa16.43■□□□□ 0.22
INO80E-213ENST00000569957 MAGI3Q5TCQ9 1506 aa16.42■□□□□ 0.22
INO80E-213ENST00000569957 FTSJ3Q8IY81 847 aaKnown RBP16.42■□□□□ 0.22
INO80E-213ENST00000569957 KIF14Q15058 1648 aa16.42■□□□□ 0.22
INO80E-213ENST00000569957 MAPKBP1O60336 1514 aa16.41■□□□□ 0.22
INO80E-213ENST00000569957 ANP32BQ92688 251 aaKnown RBP16.41■□□□□ 0.22
INO80E-213ENST00000569957 NUDCQ9Y266 331 aa16.41■□□□□ 0.22
INO80E-213ENST00000569957 CCDC144AA2RUR9 1427 aa16.4■□□□□ 0.22
INO80E-213ENST00000569957 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
INO80E-213ENST00000569957 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
INO80E-213ENST00000569957 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
INO80E-213ENST00000569957 PANK3Q9H999 370 aa16.38■□□□□ 0.21
INO80E-213ENST00000569957 C9orf84Q5VXU9 1444 aa16.38■□□□□ 0.21
INO80E-213ENST00000569957 PRKRIP1Q9H875 184 aaPredicted RBP16.38■□□□□ 0.21
INO80E-213ENST00000569957 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
INO80E-213ENST00000569957 CAMSAP2Q08AD1 1489 aa16.37■□□□□ 0.21
INO80E-213ENST00000569957 PLEKHH2Q8IVE3 1493 aa16.36■□□□□ 0.21
INO80E-213ENST00000569957 LRRIQ1Q96JM4 1722 aa16.36■□□□□ 0.21
INO80E-213ENST00000569957 ABCC5O15440 1437 aa16.36■□□□□ 0.21
INO80E-213ENST00000569957 HAP1P54257 671 aaPredicted RBP16.35■□□□□ 0.21
INO80E-213ENST00000569957 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
INO80E-213ENST00000569957 GPATCH8Q9UKJ3 1502 aaKnown RBP16.34■□□□□ 0.21
INO80E-213ENST00000569957 ATP10BO94823 1461 aa16.34■□□□□ 0.21
INO80E-213ENST00000569957 ABCA8O94911 1581 aa16.33■□□□□ 0.21
INO80E-213ENST00000569957 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.21
INO80E-213ENST00000569957 MYH16Q9H6N6 1097 aa16.33■□□□□ 0.21
INO80E-213ENST00000569957 DDRGK1Q96HY6 314 aa16.33■□□□□ 0.2
INO80E-213ENST00000569957 DNMT1P26358 1616 aaKnown RBP16.32■□□□□ 0.2
INO80E-213ENST00000569957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.32■□□□□ 0.2
INO80E-213ENST00000569957 RCAN3Q9UKA8 241 aa16.32■□□□□ 0.2
INO80E-213ENST00000569957 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
INO80E-213ENST00000569957 CLUAP1Q96AJ1 413 aa16.32■□□□□ 0.2
INO80E-213ENST00000569957 RBM19Q9Y4C8 960 aaKnown RBP16.32■□□□□ 0.2
INO80E-213ENST00000569957 USP47Q96K76 1375 aa16.31■□□□□ 0.2
INO80E-213ENST00000569957 GCC2Q8IWJ2 1684 aa16.31■□□□□ 0.2
INO80E-213ENST00000569957 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
INO80E-213ENST00000569957 PLIN1O60240 522 aa16.3■□□□□ 0.2
INO80E-213ENST00000569957 NLRP13Q86W25 1043 aa16.29■□□□□ 0.2
INO80E-213ENST00000569957 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
INO80E-213ENST00000569957 DEKP35659 375 aaKnown RBP16.29■□□□□ 0.2
INO80E-213ENST00000569957 RALBP1Q15311 655 aa16.28■□□□□ 0.2
INO80E-213ENST00000569957 NBPF8Q3BBV2 869 aa16.28■□□□□ 0.2
INO80E-213ENST00000569957 ADCY10Q96PN6 1610 aa16.27■□□□□ 0.2
INO80E-213ENST00000569957 CHD1O14646 1710 aa16.27■□□□□ 0.2
INO80E-213ENST00000569957 APBB1O00213 710 aa16.27■□□□□ 0.19
INO80E-213ENST00000569957 NBPF1Q3BBV0 1214 aa16.27■□□□□ 0.19
INO80E-213ENST00000569957 TPRNQ4KMQ1 711 aa16.27■□□□□ 0.19
INO80E-213ENST00000569957 TMEM132EQ6IEE7 984 aa16.27■□□□□ 0.19
INO80E-213ENST00000569957 TSHZ2Q9NRE2 1034 aa16.27■□□□□ 0.19
INO80E-213ENST00000569957 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
INO80E-213ENST00000569957 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
INO80E-213ENST00000569957 BCL2L13Q9BXK5 485 aa16.26■□□□□ 0.19
INO80E-213ENST00000569957 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
INO80E-213ENST00000569957 CCDC141Q6ZP82 1450 aa16.25■□□□□ 0.19
INO80E-213ENST00000569957 MINK1Q8N4C8 1332 aaPredicted RBP16.25■□□□□ 0.19
INO80E-213ENST00000569957 NCOA1Q15788 1441 aa16.25■□□□□ 0.19
INO80E-213ENST00000569957 KIAA1107Q9UPP5 1409 aa16.25■□□□□ 0.19
INO80E-213ENST00000569957 SHANK2Q9UPX8 1470 aa16.24■□□□□ 0.19
INO80E-213ENST00000569957 HDGFL2Q7Z4V5 671 aaPredicted RBP16.23■□□□□ 0.19
INO80E-213ENST00000569957 ABCC2Q92887 1545 aa16.23■□□□□ 0.19
INO80E-213ENST00000569957 ELL2O00472 640 aaPredicted RBP16.22■□□□□ 0.19
INO80E-213ENST00000569957 SCAPERQ9BY12 1400 aa16.22■□□□□ 0.19
INO80E-213ENST00000569957 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
INO80E-213ENST00000569957 LTV1Q96GA3 475 aaPredicted RBP16.2■□□□□ 0.18
INO80E-213ENST00000569957 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
INO80E-213ENST00000569957 SPRYD3Q8NCJ5 442 aa16.2■□□□□ 0.18
INO80E-213ENST00000569957 CCDC184Q52MB2 194 aa16.2■□□□□ 0.18
INO80E-213ENST00000569957 ADGBQ8N7X0 1667 aa16.19■□□□□ 0.18
INO80E-213ENST00000569957 CFAP70Q5T0N1 1121 aa16.19■□□□□ 0.18
INO80E-213ENST00000569957 ABCC10Q5T3U5 1492 aa16.19■□□□□ 0.18
INO80E-213ENST00000569957 APAF1O14727 1248 aa16.18■□□□□ 0.18
INO80E-213ENST00000569957 GOLGA2Q08379 1002 aa16.18■□□□□ 0.18
INO80E-213ENST00000569957 STAC3Q96MF2 364 aa16.17■□□□□ 0.18
INO80E-213ENST00000569957 ANKRD30BQ9BXX2 1392 aa16.17■□□□□ 0.18
INO80E-213ENST00000569957 CCDC7Q96M83 1385 aa16.15■□□□□ 0.18
INO80E-213ENST00000569957 RAPGEF3O95398 923 aa16.15■□□□□ 0.18
INO80E-213ENST00000569957 TAOK2Q9UL54 1235 aa16.15■□□□□ 0.18
INO80E-213ENST00000569957 MYBBP1AQ9BQG0 1328 aaKnown RBP16.15■□□□□ 0.18
INO80E-213ENST00000569957 UHRF1BP1LA0JNW5 1464 aa16.15■□□□□ 0.18
INO80E-213ENST00000569957 SHROOM2Q13796 1616 aa16.14■□□□□ 0.18
INO80E-213ENST00000569957 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
INO80E-213ENST00000569957 NGDNQ8NEJ9 315 aaKnown RBP16.14■□□□□ 0.17
INO80E-213ENST00000569957 ARHGEF5Q12774 1597 aa16.14■□□□□ 0.17
INO80E-213ENST00000569957 CD109Q6YHK3 1445 aa16.13■□□□□ 0.17
INO80E-213ENST00000569957 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
INO80E-213ENST00000569957 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
INO80E-213ENST00000569957 TERF2IPQ9NYB0 399 aa16.13■□□□□ 0.17
INO80E-213ENST00000569957 RPRD2Q5VT52 1461 aaKnown RBP16.13■□□□□ 0.17
INO80E-213ENST00000569957 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
INO80E-213ENST00000569957 BECN1Q14457 450 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms