RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 TMEM92Q6UXU6 159 aa10.82□□□□□ -0.68
UBFD1-209ENST00000569919 ZC3H15Q8WU90 426 aaKnown RBP10.82□□□□□ -0.68
UBFD1-209ENST00000569919 CUX1P39880 1505 aa10.82□□□□□ -0.68
UBFD1-209ENST00000569919 MLLT3P42568 568 aaPredicted RBP10.81□□□□□ -0.68
UBFD1-209ENST00000569919 METRNQ9UJH8 293 aa10.81□□□□□ -0.68
UBFD1-209ENST00000569919 SPDYE16A6NNV3 312 aaPredicted RBP10.79□□□□□ -0.68
UBFD1-209ENST00000569919 FAM69CQ0P6D2 419 aa10.79□□□□□ -0.68
UBFD1-209ENST00000569919 PDIA6Q15084 440 aa10.78□□□□□ -0.68
UBFD1-209ENST00000569919 PBRM1Q86U86 1689 aa10.78□□□□□ -0.68
UBFD1-209ENST00000569919 ERCC6L2Q5T890 1561 aa10.77□□□□□ -0.68
UBFD1-209ENST00000569919 GRIN2AQ12879 1464 aa10.77□□□□□ -0.69
UBFD1-209ENST00000569919 ABCA10Q8WWZ4 1543 aa10.77□□□□□ -0.69
UBFD1-209ENST00000569919 CEP170Q5SW79 1584 aa10.77□□□□□ -0.69
UBFD1-209ENST00000569919 KDM4FA0A1W2PPD8 638 aa10.76□□□□□ -0.69
UBFD1-209ENST00000569919 NUP160Q12769 1436 aa10.75□□□□□ -0.69
UBFD1-209ENST00000569919 RBM26Q5T8P6 1007 aaKnown RBP10.75□□□□□ -0.69
UBFD1-209ENST00000569919 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
UBFD1-209ENST00000569919 MAP3K9P80192 1104 aa10.74□□□□□ -0.69
UBFD1-209ENST00000569919 KIF13AQ9H1H9 1805 aa10.74□□□□□ -0.69
UBFD1-209ENST00000569919 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
UBFD1-209ENST00000569919 C3orf67Q6ZVT6 689 aa10.72□□□□□ -0.69
UBFD1-209ENST00000569919 FHAD1B1AJZ9 1412 aa10.72□□□□□ -0.69
UBFD1-209ENST00000569919 PRG4Q92954 1404 aaPredicted RBP10.72□□□□□ -0.69
UBFD1-209ENST00000569919 ABCC10Q5T3U5 1492 aa10.72□□□□□ -0.69
UBFD1-209ENST00000569919 ABCA5Q8WWZ7 1642 aa10.72□□□□□ -0.69
UBFD1-209ENST00000569919 ZMYND10O75800 440 aa10.71□□□□□ -0.69
UBFD1-209ENST00000569919 SHROOM2Q13796 1616 aa10.71□□□□□ -0.69
UBFD1-209ENST00000569919 WRNQ14191 1432 aaPredicted RBP eCLIP10.71□□□□□ -0.69
UBFD1-209ENST00000569919 OXER1Q8TDS5 423 aa10.71□□□□□ -0.69
UBFD1-209ENST00000569919 SLC24A3Q9HC58 644 aa10.69□□□□□ -0.7
UBFD1-209ENST00000569919 GPIHBP1Q8IV16 184 aa10.68□□□□□ -0.7
UBFD1-209ENST00000569919 ADAMTS12P58397 1594 aa10.66□□□□□ -0.7
UBFD1-209ENST00000569919 GRXCR2A6NFK2 248 aa10.66□□□□□ -0.7
UBFD1-209ENST00000569919 BARGINQ6ZT62 677 aa10.66□□□□□ -0.7
UBFD1-209ENST00000569919 TBC1D12O60347 775 aa10.65□□□□□ -0.7
UBFD1-209ENST00000569919 MAPKBP1O60336 1514 aa10.64□□□□□ -0.71
UBFD1-209ENST00000569919 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.64□□□□□ -0.71
UBFD1-209ENST00000569919 ERICH3Q5RHP9 1530 aa10.63□□□□□ -0.71
UBFD1-209ENST00000569919 KDM6BO15054 1643 aa10.63□□□□□ -0.71
UBFD1-209ENST00000569919 PTCD2Q8WV60 388 aaKnown RBP10.63□□□□□ -0.71
UBFD1-209ENST00000569919 DIP2BQ9P265 1576 aa10.61□□□□□ -0.71
UBFD1-209ENST00000569919 EVI5O60447 810 aa10.61□□□□□ -0.71
UBFD1-209ENST00000569919 PTGER2P43116 358 aa10.61□□□□□ -0.71
UBFD1-209ENST00000569919 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
UBFD1-209ENST00000569919 DDX12PQ92771 950 aa10.61□□□□□ -0.71
UBFD1-209ENST00000569919 SLC34A2O95436 690 aa10.6□□□□□ -0.71
UBFD1-209ENST00000569919 OSBPP22059 807 aa10.6□□□□□ -0.71
UBFD1-209ENST00000569919 KRI1Q8N9T8 703 aaKnown RBP10.59□□□□□ -0.71
UBFD1-209ENST00000569919 NUTM2FA1L443 756 aa10.57□□□□□ -0.72
UBFD1-209ENST00000569919 NEUROD2Q15784 382 aa10.57□□□□□ -0.72
UBFD1-209ENST00000569919 TMEM132AQ24JP5 1023 aa10.57□□□□□ -0.72
UBFD1-209ENST00000569919 TSPOAP1O95153 1857 aa10.57□□□□□ -0.72
UBFD1-209ENST00000569919 TOP2BQ02880 1626 aa10.56□□□□□ -0.72
UBFD1-209ENST00000569919 ADCY10Q96PN6 1610 aa10.56□□□□□ -0.72
UBFD1-209ENST00000569919 GPR37O15354 613 aa10.56□□□□□ -0.72
UBFD1-209ENST00000569919 AK7Q96M32 723 aa10.56□□□□□ -0.72
UBFD1-209ENST00000569919 ZNF316A6NFI3 1004 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-209ENST00000569919 ANO8Q9HCE9 1232 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-209ENST00000569919 BIVM-ERCC5R4GMW8 1640 aa10.54□□□□□ -0.72
UBFD1-209ENST00000569919 KIAA0586Q9BVV6 1533 aa10.53□□□□□ -0.72
UBFD1-209ENST00000569919 PTPRGP23470 1445 aa10.53□□□□□ -0.72
UBFD1-209ENST00000569919 POTEJP0CG39 1038 aa10.52□□□□□ -0.73
UBFD1-209ENST00000569919 PRIM1P49642 420 aaKnown RBP10.52□□□□□ -0.73
UBFD1-209ENST00000569919 PCDHGA4Q9Y5G9 962 aa10.52□□□□□ -0.73
UBFD1-209ENST00000569919 ADGRL1O94910 1474 aa10.52□□□□□ -0.73
UBFD1-209ENST00000569919 RUSC2Q8N2Y8 1516 aa10.51□□□□□ -0.73
UBFD1-209ENST00000569919 PLB1Q6P1J6 1458 aa10.5□□□□□ -0.73
UBFD1-209ENST00000569919 POTEB2H3BUK9 544 aa10.5□□□□□ -0.73
UBFD1-209ENST00000569919 SUPT5HO00267 1087 aaKnown RBP10.49□□□□□ -0.73
UBFD1-209ENST00000569919 FBXO41Q8TF61 875 aa10.49□□□□□ -0.73
UBFD1-209ENST00000569919 TTBK1Q5TCY1 1321 aaPredicted RBP10.49□□□□□ -0.73
UBFD1-209ENST00000569919 TRIM66O15016 1216 aa10.48□□□□□ -0.73
UBFD1-209ENST00000569919 GNPATO15228 680 aa10.48□□□□□ -0.73
UBFD1-209ENST00000569919 FCHSD2O94868 740 aa10.48□□□□□ -0.73
UBFD1-209ENST00000569919 ASXL2Q76L83 1435 aa10.48□□□□□ -0.73
UBFD1-209ENST00000569919 GLI2P10070 1586 aa10.48□□□□□ -0.73
UBFD1-209ENST00000569919 PHF14O94880 888 aa10.47□□□□□ -0.73
UBFD1-209ENST00000569919 HIC1Q14526 733 aa10.47□□□□□ -0.73
UBFD1-209ENST00000569919 IGF1RP08069 1367 aa10.47□□□□□ -0.73
UBFD1-209ENST00000569919 TNIKQ9UKE5 1360 aa10.47□□□□□ -0.73
UBFD1-209ENST00000569919 CARMIL2Q6F5E8 1435 aa10.47□□□□□ -0.73
UBFD1-209ENST00000569919 ABCC2Q92887 1545 aa10.47□□□□□ -0.73
UBFD1-209ENST00000569919 HECW2Q9P2P5 1572 aa10.47□□□□□ -0.73
UBFD1-209ENST00000569919 EPAS1Q99814 870 aa10.46□□□□□ -0.73
UBFD1-209ENST00000569919 GTF3C3Q9Y5Q9 886 aa10.46□□□□□ -0.73
UBFD1-209ENST00000569919 MINK1Q8N4C8 1332 aaPredicted RBP10.46□□□□□ -0.73
UBFD1-209ENST00000569919 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
UBFD1-209ENST00000569919 PTGDRQ13258 359 aa10.45□□□□□ -0.74
UBFD1-209ENST00000569919 PCDHGA10Q9Y5H3 936 aa10.45□□□□□ -0.74
UBFD1-209ENST00000569919 COL17A1Q9UMD9 1497 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-209ENST00000569919 FECHP22830 423 aa10.44□□□□□ -0.74
UBFD1-209ENST00000569919 EN1Q05925 392 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-209ENST00000569919 SLAIN1Q8ND83 568 aa10.44□□□□□ -0.74
UBFD1-209ENST00000569919 GPBP1L1Q9HC44 474 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-209ENST00000569919 TEX14Q8IWB6 1497 aa10.43□□□□□ -0.74
UBFD1-209ENST00000569919 IRF6O14896 467 aa10.43□□□□□ -0.74
UBFD1-209ENST00000569919 PDE4DQ08499 809 aa10.43□□□□□ -0.74
UBFD1-209ENST00000569919 UHRF1BP1LA0JNW5 1464 aa10.42□□□□□ -0.74
UBFD1-209ENST00000569919 PPRC1Q5VV67 1664 aaKnown RBP10.42□□□□□ -0.74
UBFD1-209ENST00000569919 MAP3K7O43318 606 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms