RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
SPG7-222ENST00000569820 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
SPG7-222ENST00000569820 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
SPG7-222ENST00000569820 CFAP74Q9C0B2 1584 aa16.63■□□□□ 0.25
SPG7-222ENST00000569820 ATP7AQ04656 1500 aa16.63■□□□□ 0.25
SPG7-222ENST00000569820 FANCIQ9NVI1 1328 aa16.61■□□□□ 0.25
SPG7-222ENST00000569820 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
SPG7-222ENST00000569820 SPAG9O60271 1321 aaKnown RBP16.6■□□□□ 0.25
SPG7-222ENST00000569820 AFAP1Q8N556 730 aa16.6■□□□□ 0.25
SPG7-222ENST00000569820 SCAPERQ9BY12 1400 aa16.6■□□□□ 0.25
SPG7-222ENST00000569820 DEPDC5O75140 1603 aa16.59■□□□□ 0.25
SPG7-222ENST00000569820 CD109Q6YHK3 1445 aa16.58■□□□□ 0.24
SPG7-222ENST00000569820 KIDINS220Q9ULH0 1771 aa16.57■□□□□ 0.24
SPG7-222ENST00000569820 ERICH6BQ5W0A0 696 aa16.57■□□□□ 0.24
SPG7-222ENST00000569820 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
SPG7-222ENST00000569820 EIF2AK4Q9P2K8 1649 aaKnown RBP16.55■□□□□ 0.24
SPG7-222ENST00000569820 CCER2I3L3R5 266 aa16.55■□□□□ 0.24
SPG7-222ENST00000569820 KDM5CP41229 1560 aa16.55■□□□□ 0.24
SPG7-222ENST00000569820 MAP3K4Q9Y6R4 1608 aa16.54■□□□□ 0.24
SPG7-222ENST00000569820 ZNF518AQ6AHZ1 1483 aa16.54■□□□□ 0.24
SPG7-222ENST00000569820 NBPF8Q3BBV2 869 aa16.54■□□□□ 0.24
SPG7-222ENST00000569820 PLA2R1Q13018 1463 aa16.52■□□□□ 0.24
SPG7-222ENST00000569820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.241e-6■□□□□ 10.5
SPG7-222ENST00000569820 POGZQ7Z3K3 1410 aa16.52■□□□□ 0.24
SPG7-222ENST00000569820 E9PCH4 1651 aa16.51■□□□□ 0.23
SPG7-222ENST00000569820 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
SPG7-222ENST00000569820 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
SPG7-222ENST00000569820 MROH1Q8NDA8 1641 aa16.51■□□□□ 0.23
SPG7-222ENST00000569820 ATP10AO60312 1499 aa16.5■□□□□ 0.23
SPG7-222ENST00000569820 GLI2P10070 1586 aa16.5■□□□□ 0.23
SPG7-222ENST00000569820 HECW2Q9P2P5 1572 aa16.5■□□□□ 0.23
SPG7-222ENST00000569820 NEO1Q92859 1461 aa16.5■□□□□ 0.23
SPG7-222ENST00000569820 ANP32CO43423 234 aa16.5■□□□□ 0.23
SPG7-222ENST00000569820 PRDM15P57071 1507 aaPredicted RBP16.49■□□□□ 0.23
SPG7-222ENST00000569820 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
SPG7-222ENST00000569820 TET3O43151 1660 aa16.49■□□□□ 0.23
SPG7-222ENST00000569820 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
SPG7-222ENST00000569820 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
SPG7-222ENST00000569820 HSPA5P11021 654 aaKnown RBP16.47■□□□□ 0.23
SPG7-222ENST00000569820 DHX29Q7Z478 1369 aaKnown RBP16.47■□□□□ 0.23
SPG7-222ENST00000569820 POLR1AO95602 1720 aaPredicted RBP16.46■□□□□ 0.23
SPG7-222ENST00000569820 MLH3Q9UHC1 1453 aa16.46■□□□□ 0.23
SPG7-222ENST00000569820 EIF4G2P78344 907 aaKnown RBP eCLIP16.46■□□□□ 0.23
SPG7-222ENST00000569820 DIP2BQ9P265 1576 aa16.46■□□□□ 0.22
SPG7-222ENST00000569820 SPHKAPQ2M3C7 1700 aa16.46■□□□□ 0.22
SPG7-222ENST00000569820 ABCA6Q8N139 1617 aa16.45■□□□□ 0.22
SPG7-222ENST00000569820 RICTORQ6R327 1708 aa16.45■□□□□ 0.22
SPG7-222ENST00000569820 SPATA31E1Q6ZUB1 1445 aa16.45■□□□□ 0.22
SPG7-222ENST00000569820 RNF17Q9BXT8 1623 aaKnown RBP16.45■□□□□ 0.22
SPG7-222ENST00000569820 FRMPD1Q5SYB0 1578 aa16.45■□□□□ 0.22
SPG7-222ENST00000569820 RALGAPBQ86X10 1494 aa16.44■□□□□ 0.22
SPG7-222ENST00000569820 BCORL1Q5H9F3 1711 aa16.43■□□□□ 0.22
SPG7-222ENST00000569820 TRPM2O94759 1503 aa16.43■□□□□ 0.22
SPG7-222ENST00000569820 A2MP01023 1474 aa16.43■□□□□ 0.22
SPG7-222ENST00000569820 DEKP35659 375 aaKnown RBP16.42■□□□□ 0.22
SPG7-222ENST00000569820 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
SPG7-222ENST00000569820 CEP152O94986 1710 aa16.41■□□□□ 0.22
SPG7-222ENST00000569820 EIF5BO60841 1220 aaKnown RBP16.41■□□□□ 0.22
SPG7-222ENST00000569820 TRPM1Q7Z4N2 1603 aa16.4■□□□□ 0.22
SPG7-222ENST00000569820 KIF3BO15066 747 aa16.4■□□□□ 0.22
SPG7-222ENST00000569820 PPRC1Q5VV67 1664 aaKnown RBP16.4■□□□□ 0.22
SPG7-222ENST00000569820 WASHC2AQ641Q2 1341 aa16.4■□□□□ 0.22
SPG7-222ENST00000569820 KANK1Q14678 1352 aa16.39■□□□□ 0.21
SPG7-222ENST00000569820 CLTCL1P53675 1640 aa16.39■□□□□ 0.21
SPG7-222ENST00000569820 PTPRTO14522 1441 aa16.39■□□□□ 0.21
SPG7-222ENST00000569820 EFCAB6Q5THR3 1501 aa16.39■□□□□ 0.21
SPG7-222ENST00000569820 ZNF326Q5BKZ1 582 aaKnown RBP16.39■□□□□ 0.21
SPG7-222ENST00000569820 DIP2CQ9Y2E4 1556 aa16.39■□□□□ 0.21
SPG7-222ENST00000569820 LMTK2Q8IWU2 1503 aa16.37■□□□□ 0.21
SPG7-222ENST00000569820 PRAG1Q86YV5 1406 aa16.37■□□□□ 0.21
SPG7-222ENST00000569820 DCAF11Q8TEB1 546 aa16.36■□□□□ 0.21
SPG7-222ENST00000569820 USP47Q96K76 1375 aa16.36■□□□□ 0.21
SPG7-222ENST00000569820 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
SPG7-222ENST00000569820 TSPOAP1O95153 1857 aa16.35■□□□□ 0.21
SPG7-222ENST00000569820 CCDC7Q96M83 1385 aa16.34■□□□□ 0.21
SPG7-222ENST00000569820 RAPGEF3O95398 923 aa16.34■□□□□ 0.21
SPG7-222ENST00000569820 KDM2AQ9Y2K7 1162 aa16.34■□□□□ 0.21
SPG7-222ENST00000569820 C11orf95C9JLR9 678 aaPredicted RBP16.34■□□□□ 0.21
SPG7-222ENST00000569820 ZMYM4Q5VZL5 1548 aa16.33■□□□□ 0.2
SPG7-222ENST00000569820 HNRNPUQ00839 825 aaKnown RBP eCLIP16.33■□□□□ 0.2
SPG7-222ENST00000569820 KIF13AQ9H1H9 1805 aa16.32■□□□□ 0.2
SPG7-222ENST00000569820 LAMC1P11047 1609 aa16.32■□□□□ 0.2
SPG7-222ENST00000569820 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
SPG7-222ENST00000569820 NEURL4Q96JN8 1562 aa16.31■□□□□ 0.2
SPG7-222ENST00000569820 FAM69CQ0P6D2 419 aa16.31■□□□□ 0.2
SPG7-222ENST00000569820 CNTLNQ9NXG0 1405 aa16.3■□□□□ 0.2
SPG7-222ENST00000569820 MADDQ8WXG6 1647 aa16.3■□□□□ 0.2
SPG7-222ENST00000569820 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
SPG7-222ENST00000569820 UGGT1Q9NYU2 1555 aa16.29■□□□□ 0.2
SPG7-222ENST00000569820 ABCC3O15438 1527 aa16.29■□□□□ 0.2
SPG7-222ENST00000569820 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
SPG7-222ENST00000569820 CAMSAP1Q5T5Y3 1602 aa16.29■□□□□ 0.2
SPG7-222ENST00000569820 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
SPG7-222ENST00000569820 ROCK2O75116 1388 aaKnown RBP16.28■□□□□ 0.2
SPG7-222ENST00000569820 CARD11Q9BXL7 1154 aa16.28■□□□□ 0.2
SPG7-222ENST00000569820 KIF1BO60333 1816 aa16.28■□□□□ 0.2
SPG7-222ENST00000569820 GPRASP1Q5JY77 1395 aa16.28■□□□□ 0.2
SPG7-222ENST00000569820 MROH2AA6NES4 1674 aa16.27■□□□□ 0.19
SPG7-222ENST00000569820 ZC3H13Q5T200 1668 aaKnown RBP16.26■□□□□ 0.19
SPG7-222ENST00000569820 IFT172Q9UG01 1749 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms