RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 TET3O43151 1660 aa10.97□□□□□ -0.65
LINC00559-201ENST00000569476 EFCAB2Q5VUJ9 269 aa10.96□□□□□ -0.65
LINC00559-201ENST00000569476 YTHDC1Q96MU7 727 aaKnown RBP10.96□□□□□ -0.65
LINC00559-201ENST00000569476 PKD2Q13563 968 aa10.96□□□□□ -0.66
LINC00559-201ENST00000569476 KIAA1210Q9ULL0 1709 aa10.95□□□□□ -0.66
LINC00559-201ENST00000569476 WASHC2AQ641Q2 1341 aa10.95□□□□□ -0.66
LINC00559-201ENST00000569476 TRPM2O94759 1503 aa10.95□□□□□ -0.66
LINC00559-201ENST00000569476 CEP152O94986 1710 aa10.94□□□□□ -0.66
LINC00559-201ENST00000569476 ARID3CA6NKF2 412 aa10.94□□□□□ -0.66
LINC00559-201ENST00000569476 ZNF777Q9ULD5 760 aaPredicted RBP10.94□□□□□ -0.66
LINC00559-201ENST00000569476 ZMYM4Q5VZL5 1548 aa10.93□□□□□ -0.66
LINC00559-201ENST00000569476 LMTK2Q8IWU2 1503 aa10.93□□□□□ -0.66
LINC00559-201ENST00000569476 ERICH6BQ5W0A0 696 aa10.93□□□□□ -0.66
LINC00559-201ENST00000569476 INSRP06213 1382 aa10.93□□□□□ -0.66
LINC00559-201ENST00000569476 CCDC144AA2RUR9 1427 aa10.93□□□□□ -0.66
LINC00559-201ENST00000569476 USP47Q96K76 1375 aa10.92□□□□□ -0.66
LINC00559-201ENST00000569476 NBPF8Q3BBV2 869 aa10.92□□□□□ -0.66
LINC00559-201ENST00000569476 PTPRTO14522 1441 aa10.92□□□□□ -0.66
LINC00559-201ENST00000569476 PRAG1Q86YV5 1406 aa10.92□□□□□ -0.66
LINC00559-201ENST00000569476 ATP7AQ04656 1500 aa10.91□□□□□ -0.66
LINC00559-201ENST00000569476 SPHKAPQ2M3C7 1700 aa10.91□□□□□ -0.66
LINC00559-201ENST00000569476 HNRNPMP52272 730 aaKnown RBP eCLIP10.9□□□□□ -0.66
LINC00559-201ENST00000569476 PLA2R1Q13018 1463 aa10.88□□□□□ -0.67
LINC00559-201ENST00000569476 SCAPERQ9BY12 1400 aa10.88□□□□□ -0.67
LINC00559-201ENST00000569476 KIF7Q2M1P5 1343 aa10.88□□□□□ -0.67
LINC00559-201ENST00000569476 WASHC2CQ9Y4E1 1318 aa10.87□□□□□ -0.67
LINC00559-201ENST00000569476 A2MP01023 1474 aa10.86□□□□□ -0.67
LINC00559-201ENST00000569476 MADDQ8WXG6 1647 aa10.86□□□□□ -0.67
LINC00559-201ENST00000569476 IQGAP1P46940 1657 aa10.86□□□□□ -0.67
LINC00559-201ENST00000569476 FANCAO15360 1455 aa10.86□□□□□ -0.67
LINC00559-201ENST00000569476 KANK1Q14678 1352 aa10.86□□□□□ -0.67
LINC00559-201ENST00000569476 DHX29Q7Z478 1369 aaKnown RBP10.86□□□□□ -0.67
LINC00559-201ENST00000569476 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
LINC00559-201ENST00000569476 MYOM2P54296 1465 aa10.86□□□□□ -0.67
LINC00559-201ENST00000569476 PRKRIP1Q9H875 184 aaPredicted RBP10.85□□□□□ -0.67
LINC00559-201ENST00000569476 TRAPPC8Q9Y2L5 1435 aa10.85□□□□□ -0.67
LINC00559-201ENST00000569476 ZNF518AQ6AHZ1 1483 aa10.85□□□□□ -0.67
LINC00559-201ENST00000569476 FOXD1Q16676 465 aa10.84□□□□□ -0.67
LINC00559-201ENST00000569476 SUPT16HQ9Y5B9 1047 aaKnown RBP10.84□□□□□ -0.67
LINC00559-201ENST00000569476 NEO1Q92859 1461 aa10.84□□□□□ -0.67
LINC00559-201ENST00000569476 COL17A1Q9UMD9 1497 aaPredicted RBP10.84□□□□□ -0.67
LINC00559-201ENST00000569476 MROH1Q8NDA8 1641 aa10.84□□□□□ -0.67
LINC00559-201ENST00000569476 MLH3Q9UHC1 1453 aa10.84□□□□□ -0.67
LINC00559-201ENST00000569476 IFT172Q9UG01 1749 aa10.83□□□□□ -0.68
LINC00559-201ENST00000569476 SPAG9O60271 1321 aaKnown RBP10.83□□□□□ -0.68
LINC00559-201ENST00000569476 ADGRL1O94910 1474 aa10.83□□□□□ -0.68
LINC00559-201ENST00000569476 GLI2P10070 1586 aa10.83□□□□□ -0.68
LINC00559-201ENST00000569476 ASXL2Q76L83 1435 aa10.83□□□□□ -0.68
LINC00559-201ENST00000569476 EFCAB6Q5THR3 1501 aa10.83□□□□□ -0.68
LINC00559-201ENST00000569476 ZC3H13Q5T200 1668 aaKnown RBP10.83□□□□□ -0.68
LINC00559-201ENST00000569476 NEFLP07196 543 aa10.82□□□□□ -0.68
LINC00559-201ENST00000569476 ZBED9Q6R2W3 1325 aa10.82□□□□□ -0.68
LINC00559-201ENST00000569476 RALBP1Q15311 655 aa10.82□□□□□ -0.68
LINC00559-201ENST00000569476 KIDINS220Q9ULH0 1771 aa10.81□□□□□ -0.68
LINC00559-201ENST00000569476 HECW2Q9P2P5 1572 aa10.81□□□□□ -0.68
LINC00559-201ENST00000569476 BRD4O60885 1362 aaPredicted RBP10.81□□□□□ -0.68
LINC00559-201ENST00000569476 MYO3AQ8NEV4 1616 aa10.81□□□□□ -0.68
LINC00559-201ENST00000569476 CLTCL1P53675 1640 aa10.8□□□□□ -0.68
LINC00559-201ENST00000569476 SETBP1Q9Y6X0 1596 aa10.8□□□□□ -0.68
LINC00559-201ENST00000569476 KIF1BO60333 1816 aa10.8□□□□□ -0.68
LINC00559-201ENST00000569476 CARD11Q9BXL7 1154 aa10.8□□□□□ -0.68
LINC00559-201ENST00000569476 NRXN1Q9ULB1 1477 aa10.79□□□□□ -0.68
LINC00559-201ENST00000569476 SYNMO15061 1565 aa10.79□□□□□ -0.68
LINC00559-201ENST00000569476 POGZQ7Z3K3 1410 aa10.79□□□□□ -0.68
LINC00559-201ENST00000569476 C11orf95C9JLR9 678 aaPredicted RBP10.78□□□□□ -0.68
LINC00559-201ENST00000569476 MAP3K4Q9Y6R4 1608 aa10.77□□□□□ -0.68
LINC00559-201ENST00000569476 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.69
LINC00559-201ENST00000569476 HIRIP3Q9BW71 556 aaPredicted RBP10.77□□□□□ -0.69
LINC00559-201ENST00000569476 SCAF11Q99590 1463 aaKnown RBP10.76□□□□□ -0.69
LINC00559-201ENST00000569476 ADGRB3O60242 1522 aa10.76□□□□□ -0.69
LINC00559-201ENST00000569476 SMG6Q86US8 1419 aaKnown RBP10.76□□□□□ -0.69
LINC00559-201ENST00000569476 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
LINC00559-201ENST00000569476 LRPPRCP42704 1394 aaKnown RBP10.75□□□□□ -0.69
LINC00559-201ENST00000569476 REREQ9P2R6 1566 aa10.75□□□□□ -0.69
LINC00559-201ENST00000569476 CDCA8Q53HL2 280 aa10.75□□□□□ -0.69
LINC00559-201ENST00000569476 NPC1L1Q9UHC9 1359 aa10.75□□□□□ -0.69
LINC00559-201ENST00000569476 PARD3Q8TEW0 1356 aa10.75□□□□□ -0.69
LINC00559-201ENST00000569476 PPRC1Q5VV67 1664 aaKnown RBP10.75□□□□□ -0.69
LINC00559-201ENST00000569476 MYT1Q01538 1121 aa10.75□□□□□ -0.69
LINC00559-201ENST00000569476 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
LINC00559-201ENST00000569476 DCAF11Q8TEB1 546 aa10.75□□□□□ -0.69
LINC00559-201ENST00000569476 MYBBP1AQ9BQG0 1328 aaKnown RBP10.75□□□□□ -0.69
LINC00559-201ENST00000569476 SBNO2Q9Y2G9 1366 aa10.73□□□□□ -0.69
LINC00559-201ENST00000569476 ARHGAP31Q2M1Z3 1444 aa10.73□□□□□ -0.69
LINC00559-201ENST00000569476 FRMPD1Q5SYB0 1578 aa10.72□□□□□ -0.69
LINC00559-201ENST00000569476 NPM1P06748 294 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00559-201ENST00000569476 KDM5AP29375 1690 aaKnown RBP10.72□□□□□ -0.69
LINC00559-201ENST00000569476 PIK3C2BO00750 1634 aa10.72□□□□□ -0.69
LINC00559-201ENST00000569476 MRS2Q9HD23 443 aa10.72□□□□□ -0.69
LINC00559-201ENST00000569476 RPGRIP1LQ68CZ1 1315 aa10.72□□□□□ -0.69
LINC00559-201ENST00000569476 CD109Q6YHK3 1445 aa10.72□□□□□ -0.69
LINC00559-201ENST00000569476 CAMSAP1Q5T5Y3 1602 aa10.71□□□□□ -0.69
LINC00559-201ENST00000569476 PPLO60437 1756 aa10.71□□□□□ -0.7
LINC00559-201ENST00000569476 RICTORQ6R327 1708 aa10.71□□□□□ -0.7
LINC00559-201ENST00000569476 ABCA6Q8N139 1617 aa10.71□□□□□ -0.7
LINC00559-201ENST00000569476 TMF1P82094 1093 aa10.7□□□□□ -0.7
LINC00559-201ENST00000569476 HNRNPUQ00839 825 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC00559-201ENST00000569476 USP32Q8NFA0 1604 aa10.7□□□□□ -0.7
LINC00559-201ENST00000569476 ABCC3O15438 1527 aa10.69□□□□□ -0.7
LINC00559-201ENST00000569476 ST20-MTHFSA0A0A6YYL1 179 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms