RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 KDM5DQ9BY66 1539 aa25.96■■□□□ 1.75
CDR2-207ENST00000569045 MYO3AQ8NEV4 1616 aa25.96■■□□□ 1.75
CDR2-207ENST00000569045 CAMSAP1Q5T5Y3 1602 aa25.95■■□□□ 1.74
CDR2-207ENST00000569045 CEP170BQ9Y4F5 1589 aaPredicted RBP25.92■■□□□ 1.74
CDR2-207ENST00000569045 ZNF142P52746 1687 aaPredicted RBP25.92■■□□□ 1.74
CDR2-207ENST00000569045 PKD2Q13563 968 aa25.89■■□□□ 1.74
CDR2-207ENST00000569045 PZPP20742 1482 aa25.89■■□□□ 1.73
CDR2-207ENST00000569045 TNRQ92752 1358 aa25.88■■□□□ 1.73
CDR2-207ENST00000569045 PTPN23Q9H3S7 1636 aa25.88■■□□□ 1.73
CDR2-207ENST00000569045 PLA2R1Q13018 1463 aa25.87■■□□□ 1.73
CDR2-207ENST00000569045 A2ML1A8K2U0 1454 aa25.86■■□□□ 1.73
CDR2-207ENST00000569045 EIF2AK4Q9P2K8 1649 aaKnown RBP25.86■■□□□ 1.73
CDR2-207ENST00000569045 NCKAP5LQ9HCH0 1330 aa25.86■■□□□ 1.73
CDR2-207ENST00000569045 DUOX2Q9NRD8 1548 aa25.85■■□□□ 1.73
CDR2-207ENST00000569045 FBXO31Q5XUX0 539 aaPredicted RBP25.85■■□□□ 1.73
CDR2-207ENST00000569045 RNF17Q9BXT8 1623 aaKnown RBP25.85■■□□□ 1.73
CDR2-207ENST00000569045 FGD6Q6ZV73 1430 aa25.84■■□□□ 1.73
CDR2-207ENST00000569045 SHANK2Q9UPX8 1470 aa25.84■■□□□ 1.73
CDR2-207ENST00000569045 KIF15Q9NS87 1388 aa25.82■■□□□ 1.72
CDR2-207ENST00000569045 ABCC5O15440 1437 aa25.81■■□□□ 1.72
CDR2-207ENST00000569045 ZC3H13Q5T200 1668 aaKnown RBP25.81■■□□□ 1.72
CDR2-207ENST00000569045 CROCC2H7BZ55 1655 aa25.8■■□□□ 1.72
CDR2-207ENST00000569045 DNMT1P26358 1616 aaKnown RBP25.79■■□□□ 1.72
CDR2-207ENST00000569045 RRP7BPQ9NSQ0 103 aa25.79■■□□□ 1.72
CDR2-207ENST00000569045 DAPK1P53355 1430 aa25.79■■□□□ 1.72
CDR2-207ENST00000569045 TCOF1Q13428 1488 aaKnown RBP25.79■■□□□ 1.72
CDR2-207ENST00000569045 ABCC3O15438 1527 aa25.78■■□□□ 1.72
CDR2-207ENST00000569045 NLRP1Q9C000 1473 aa25.77■■□□□ 1.72
CDR2-207ENST00000569045 THEMISQ8N1K5 641 aaPredicted RBP25.76■■□□□ 1.71
CDR2-207ENST00000569045 ERBINQ96RT1 1412 aa25.76■■□□□ 1.71
CDR2-207ENST00000569045 ANKRD30AQ9BXX3 1397 aa25.74■■□□□ 1.71
CDR2-207ENST00000569045 LTBP4Q8N2S1 1624 aa25.73■■□□□ 1.71
CDR2-207ENST00000569045 ANKLE2Q86XL3 938 aa25.71■■□□□ 1.71
CDR2-207ENST00000569045 CHIC2Q9UKJ5 165 aa25.71■■□□□ 1.71
CDR2-207ENST00000569045 IQSEC2Q5JU85 1478 aa25.71■■□□□ 1.71
CDR2-207ENST00000569045 KANK1Q14678 1352 aa25.7■■□□□ 1.71
CDR2-207ENST00000569045 MROH1Q8NDA8 1641 aa25.7■■□□□ 1.71
CDR2-207ENST00000569045 FAM50AQ14320 339 aaKnown RBP25.7■■□□□ 1.7
CDR2-207ENST00000569045 UGGT1Q9NYU2 1555 aa25.69■■□□□ 1.7
CDR2-207ENST00000569045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.69■■□□□ 1.79e-8■■□□□ 12.4
CDR2-207ENST00000569045 ZNF335Q9H4Z2 1342 aaPredicted RBP25.68■■□□□ 1.7
CDR2-207ENST00000569045 SPATA31D1Q6ZQQ2 1576 aa25.68■■□□□ 1.7
CDR2-207ENST00000569045 CEP152O94986 1710 aa25.68■■□□□ 1.7
CDR2-207ENST00000569045 ERVK-7P63135 1459 aa25.67■■□□□ 1.7
CDR2-207ENST00000569045 POLR1AO95602 1720 aaPredicted RBP25.67■■□□□ 1.7
CDR2-207ENST00000569045 PRDM15P57071 1507 aaPredicted RBP25.67■■□□□ 1.7
CDR2-207ENST00000569045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.67■■□□□ 1.7
CDR2-207ENST00000569045 ARHGAP31Q2M1Z3 1444 aa25.63■■□□□ 1.69
CDR2-207ENST00000569045 CFAP65Q6ZU64 1925 aaKnown RBP25.61■■□□□ 1.69
CDR2-207ENST00000569045 DEPDC5O75140 1603 aa25.6■■□□□ 1.69
CDR2-207ENST00000569045 NEURL4Q96JN8 1562 aa25.59■■□□□ 1.69
CDR2-207ENST00000569045 ADGRL2O95490 1459 aa25.59■■□□□ 1.69
CDR2-207ENST00000569045 NPHP4O75161 1426 aaPredicted RBP25.56■■□□□ 1.68
CDR2-207ENST00000569045 MED14O60244 1454 aa25.55■■□□□ 1.68
CDR2-207ENST00000569045 UBAP1LF5GYI3 381 aa25.54■■□□□ 1.68
CDR2-207ENST00000569045 STAG3Q9UJ98 1225 aa25.53■■□□□ 1.68
CDR2-207ENST00000569045 CPS1P31327 1500 aa25.53■■□□□ 1.68
CDR2-207ENST00000569045 LMTK2Q8IWU2 1503 aa25.53■■□□□ 1.68
CDR2-207ENST00000569045 ANKRD50Q9ULJ7 1429 aa25.52■■□□□ 1.68
CDR2-207ENST00000569045 UBR1Q8IWV7 1749 aa25.51■■□□□ 1.67
CDR2-207ENST00000569045 IQGAP1P46940 1657 aa25.5■■□□□ 1.67
CDR2-207ENST00000569045 EID1Q9Y6B2 187 aa25.49■■□□□ 1.67
CDR2-207ENST00000569045 VWDEQ8N2E2 1590 aa25.48■■□□□ 1.67
CDR2-207ENST00000569045 TXNDC2Q86VQ3 553 aa25.46■■□□□ 1.67
CDR2-207ENST00000569045 SCAF11Q99590 1463 aaKnown RBP25.46■■□□□ 1.67
CDR2-207ENST00000569045 EFCAB6Q5THR3 1501 aa25.44■■□□□ 1.66
CDR2-207ENST00000569045 ROCK1Q13464 1354 aa25.43■■□□□ 1.66
CDR2-207ENST00000569045 SLIT1O75093 1534 aa25.42■■□□□ 1.66
CDR2-207ENST00000569045 PIK3C2BO00750 1634 aa25.42■■□□□ 1.66
CDR2-207ENST00000569045 TOM1O60784 492 aa25.42■■□□□ 1.66
CDR2-207ENST00000569045 ARHGAP23Q9P227 1491 aa25.41■■□□□ 1.66
CDR2-207ENST00000569045 PPARGC1BQ86YN6 1023 aaKnown RBP25.41■■□□□ 1.66
CDR2-207ENST00000569045 ITGAEP38570 1179 aa25.4■■□□□ 1.66
CDR2-207ENST00000569045 IDI1Q13907 227 aa25.4■■□□□ 1.66
CDR2-207ENST00000569045 SLC52A1Q9NWF4 448 aa25.4■■□□□ 1.66
CDR2-207ENST00000569045 RPRD2Q5VT52 1461 aaKnown RBP25.4■■□□□ 1.66
CDR2-207ENST00000569045 LTKP29376 864 aa25.39■■□□□ 1.66
CDR2-207ENST00000569045 TMEM2Q9UHN6 1383 aa25.39■■□□□ 1.65
CDR2-207ENST00000569045 KDM5AP29375 1690 aaKnown RBP25.39■■□□□ 1.65
CDR2-207ENST00000569045 SCAF1Q9H7N4 1312 aaKnown RBP25.38■■□□□ 1.65
CDR2-207ENST00000569045 NOS1P29475 1434 aa25.38■■□□□ 1.65
CDR2-207ENST00000569045 SYNMO15061 1565 aa25.35■■□□□ 1.65
CDR2-207ENST00000569045 TET3O43151 1660 aa25.35■■□□□ 1.65
CDR2-207ENST00000569045 DISP3Q9P2K9 1392 aa25.34■■□□□ 1.65
CDR2-207ENST00000569045 PIP4K2BP78356 416 aa25.34■■□□□ 1.65
CDR2-207ENST00000569045 UNC13BO14795 1591 aa25.34■■□□□ 1.65
CDR2-207ENST00000569045 ADGRB3O60242 1522 aa25.32■■□□□ 1.64
CDR2-207ENST00000569045 GCC2Q8IWJ2 1684 aa25.31■■□□□ 1.64
CDR2-207ENST00000569045 HDGFP51858 240 aaKnown RBP25.29■■□□□ 1.64
CDR2-207ENST00000569045 LRRC7Q96NW7 1537 aa25.28■■□□□ 1.64
CDR2-207ENST00000569045 BCANQ96GW7 911 aa25.28■■□□□ 1.64
CDR2-207ENST00000569045 NUP155O75694 1391 aa25.27■■□□□ 1.64
CDR2-207ENST00000569045 STRCP1A6NGW2 1772 aa25.26■■□□□ 1.63
CDR2-207ENST00000569045 IQGAP3Q86VI3 1631 aa25.24■■□□□ 1.63
CDR2-207ENST00000569045 PPP1R15AO75807 674 aaPredicted RBP25.23■■□□□ 1.63
CDR2-207ENST00000569045 CHGAP10645 457 aaKnown RBP25.22■■□□□ 1.63
CDR2-207ENST00000569045 HSPA1LP34931 641 aa25.21■■□□□ 1.63
CDR2-207ENST00000569045 SLC26A8Q96RN1 970 aa25.21■■□□□ 1.63
CDR2-207ENST00000569045 E9PCH4 1651 aa25.2■■□□□ 1.63
CDR2-207ENST00000569045 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms