RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 KDM4FA0A1W2PPD8 638 aa10.16□□□□□ -0.78
CDH13-211ENST00000568770 MFSD10Q14728 455 aa10.16□□□□□ -0.78
CDH13-211ENST00000568770 JPH4Q96JJ6 628 aa10.16□□□□□ -0.78
CDH13-211ENST00000568770 GPHNQ9NQX3 736 aaPredicted RBP10.16□□□□□ -0.78
CDH13-211ENST00000568770 G3V3G9 751 aa10.15□□□□□ -0.78
CDH13-211ENST00000568770 C2orf72A6NCS6 295 aa10.14□□□□□ -0.79
CDH13-211ENST00000568770 KIF3CO14782 793 aa10.14□□□□□ -0.79
CDH13-211ENST00000568770 DSG2Q14126 1118 aa10.13□□□□□ -0.79
CDH13-211ENST00000568770 KCNV2Q8TDN2 545 aa10.13□□□□□ -0.79
CDH13-211ENST00000568770 DDX27Q96GQ7 796 aaKnown RBP10.13□□□□□ -0.79
CDH13-211ENST00000568770 PPP1R15BQ5SWA1 713 aa10.1□□□□□ -0.79
CDH13-211ENST00000568770 TMC2Q8TDI7 906 aa10.1□□□□□ -0.79
CDH13-211ENST00000568770 E2F4Q16254 413 aa10.09□□□□□ -0.79
CDH13-211ENST00000568770 FOXK1P85037 733 aa10.08□□□□□ -0.8
CDH13-211ENST00000568770 PPRC1Q5VV67 1664 aaKnown RBP10.07□□□□□ -0.8
CDH13-211ENST00000568770 SUPT5HO00267 1087 aaKnown RBP10.07□□□□□ -0.8
CDH13-211ENST00000568770 BCANQ96GW7 911 aa10.07□□□□□ -0.8
CDH13-211ENST00000568770 CAMK2BQ13554 666 aa10.06□□□□□ -0.8
CDH13-211ENST00000568770 C3orf67Q6ZVT6 689 aa10.06□□□□□ -0.8
CDH13-211ENST00000568770 PLPP6Q8IY26 295 aa10.06□□□□□ -0.8
CDH13-211ENST00000568770 EMILIN3Q9NT22 766 aa10.05□□□□□ -0.8
CDH13-211ENST00000568770 KIAA0586Q9BVV6 1533 aa10.05□□□□□ -0.8
CDH13-211ENST00000568770 CUL7Q14999 1698 aa10.05□□□□□ -0.8
CDH13-211ENST00000568770 ADGRL1O94910 1474 aa10.04□□□□□ -0.8
CDH13-211ENST00000568770 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.03□□□□□ -0.8
CDH13-211ENST00000568770 P3H3Q8IVL6 736 aa10.02□□□□□ -0.81
CDH13-211ENST00000568770 ARHGEF1Q92888 912 aaKnown RBP10.01□□□□□ -0.81
CDH13-211ENST00000568770 TTBK1Q5TCY1 1321 aaPredicted RBP10.01□□□□□ -0.81
CDH13-211ENST00000568770 GLI2P10070 1586 aa10.01□□□□□ -0.81
CDH13-211ENST00000568770 PTPRGP23470 1445 aa10□□□□□ -0.81
CDH13-211ENST00000568770 ABCC2Q92887 1545 aa10□□□□□ -0.81
CDH13-211ENST00000568770 HECW2Q9P2P5 1572 aa10□□□□□ -0.81
CDH13-211ENST00000568770 ASXL2Q76L83 1435 aa9.99□□□□□ -0.81
CDH13-211ENST00000568770 NBR1Q14596 966 aa9.99□□□□□ -0.81
CDH13-211ENST00000568770 MAP3K4Q9Y6R4 1608 aa9.99□□□□□ -0.81
CDH13-211ENST00000568770 IGF1RP08069 1367 aa9.99□□□□□ -0.81
CDH13-211ENST00000568770 PLB1Q6P1J6 1458 aa9.98□□□□□ -0.81
CDH13-211ENST00000568770 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
CDH13-211ENST00000568770 COL17A1Q9UMD9 1497 aaPredicted RBP9.97□□□□□ -0.81
CDH13-211ENST00000568770 DPYSL4O14531 572 aa9.96□□□□□ -0.82
CDH13-211ENST00000568770 TNIKQ9UKE5 1360 aa9.96□□□□□ -0.82
CDH13-211ENST00000568770 KIF27Q86VH2 1401 aa9.96□□□□□ -0.82
CDH13-211ENST00000568770 SEMA3EO15041 775 aa9.95□□□□□ -0.82
CDH13-211ENST00000568770 SLAIN1Q8ND83 568 aa9.95□□□□□ -0.82
CDH13-211ENST00000568770 CARMIL2Q6F5E8 1435 aa9.95□□□□□ -0.82
CDH13-211ENST00000568770 IQGAP2Q13576 1575 aa9.95□□□□□ -0.82
CDH13-211ENST00000568770 ZCCHC11Q5TAX3 1644 aaKnown RBP9.95□□□□□ -0.82
CDH13-211ENST00000568770 UHRF1BP1LA0JNW5 1464 aa9.94□□□□□ -0.82
CDH13-211ENST00000568770 UPF1Q92900 1129 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDH13-211ENST00000568770 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
CDH13-211ENST00000568770 EPRSP07814 1512 aaKnown RBP9.93□□□□□ -0.82
CDH13-211ENST00000568770 OXER1Q8TDS5 423 aa9.93□□□□□ -0.82
CDH13-211ENST00000568770 LHX8Q68G74 356 aa9.92□□□□□ -0.82
CDH13-211ENST00000568770 SCUBE2Q9NQ36 999 aa9.92□□□□□ -0.82
CDH13-211ENST00000568770 TEX14Q8IWB6 1497 aa9.91□□□□□ -0.82
CDH13-211ENST00000568770 UACAQ9BZF9 1416 aa9.91□□□□□ -0.82
CDH13-211ENST00000568770 CARMIL1Q5VZK9 1371 aa9.91□□□□□ -0.82
CDH13-211ENST00000568770 MAMSTRQ6ZN01 415 aa9.91□□□□□ -0.82
CDH13-211ENST00000568770 DISP1Q96F81 1524 aa9.91□□□□□ -0.82
CDH13-211ENST00000568770 KDM5BQ9UGL1 1544 aa9.9□□□□□ -0.82
CDH13-211ENST00000568770 HOXB3P14651 431 aaPredicted RBP9.89□□□□□ -0.83
CDH13-211ENST00000568770 TESPA1A2RU30 521 aaPredicted RBP9.88□□□□□ -0.83
CDH13-211ENST00000568770 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
CDH13-211ENST00000568770 PTCD2Q8WV60 388 aaKnown RBP9.88□□□□□ -0.83
CDH13-211ENST00000568770 CFAP43Q8NDM7 1665 aa9.87□□□□□ -0.83
CDH13-211ENST00000568770 KIF21BO75037 1637 aa9.87□□□□□ -0.83
CDH13-211ENST00000568770 SLC34A2O95436 690 aa9.87□□□□□ -0.83
CDH13-211ENST00000568770 MLLT3P42568 568 aaPredicted RBP9.87□□□□□ -0.83
CDH13-211ENST00000568770 KIAA0556O60303 1618 aa9.86□□□□□ -0.83
CDH13-211ENST00000568770 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
CDH13-211ENST00000568770 PDIA6Q15084 440 aa9.86□□□□□ -0.83
CDH13-211ENST00000568770 UGGT2Q9NYU1 1516 aa9.86□□□□□ -0.83
CDH13-211ENST00000568770 WDR7Q9Y4E6 1490 aa9.85□□□□□ -0.83
CDH13-211ENST00000568770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.84□□□□□ -0.83
CDH13-211ENST00000568770 PCDHGA4Q9Y5G9 962 aa9.84□□□□□ -0.83
CDH13-211ENST00000568770 CTTNBP2Q8WZ74 1663 aa9.83□□□□□ -0.84
CDH13-211ENST00000568770 KHSRPQ92945 711 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDH13-211ENST00000568770 SPDYE16A6NNV3 312 aaPredicted RBP9.82□□□□□ -0.84
CDH13-211ENST00000568770 EVI5O60447 810 aa9.82□□□□□ -0.84
CDH13-211ENST00000568770 MAGI3Q5TCQ9 1506 aa9.82□□□□□ -0.84
CDH13-211ENST00000568770 FBXO41Q8TF61 875 aa9.81□□□□□ -0.84
CDH13-211ENST00000568770 CD109Q6YHK3 1445 aa9.81□□□□□ -0.84
CDH13-211ENST00000568770 RAPGEF2Q9Y4G8 1499 aa9.8□□□□□ -0.84
CDH13-211ENST00000568770 ARSIQ5FYB1 569 aa9.8□□□□□ -0.84
CDH13-211ENST00000568770 TBC1D12O60347 775 aa9.79□□□□□ -0.84
CDH13-211ENST00000568770 TPRNQ4KMQ1 711 aa9.79□□□□□ -0.84
CDH13-211ENST00000568770 KCNH8Q96L42 1107 aa9.79□□□□□ -0.84
CDH13-211ENST00000568770 ADAMTSL3P82987 1691 aa9.78□□□□□ -0.84
CDH13-211ENST00000568770 DOK7Q18PE1 504 aa9.78□□□□□ -0.84
CDH13-211ENST00000568770 GPR153Q6NV75 609 aa9.78□□□□□ -0.84
CDH13-211ENST00000568770 LMOD2Q6P5Q4 547 aa9.78□□□□□ -0.84
CDH13-211ENST00000568770 ANO8Q9HCE9 1232 aaPredicted RBP9.78□□□□□ -0.84
CDH13-211ENST00000568770 ABCA8O94911 1581 aa9.78□□□□□ -0.84
CDH13-211ENST00000568770 GRXCR2A6NFK2 248 aa9.77□□□□□ -0.85
CDH13-211ENST00000568770 DDX12PQ92771 950 aa9.77□□□□□ -0.85
CDH13-211ENST00000568770 PTGER2P43116 358 aa9.76□□□□□ -0.85
CDH13-211ENST00000568770 RBM26Q5T8P6 1007 aaKnown RBP9.76□□□□□ -0.85
CDH13-211ENST00000568770 ARAP3Q8WWN8 1544 aa9.76□□□□□ -0.85
CDH13-211ENST00000568770 PTPRMP28827 1452 aa9.75□□□□□ -0.85
CDH13-211ENST00000568770 NUDT7P0C024 238 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms