RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 DNMT1P26358 1616 aaKnown RBP25.23■■□□□ 1.63
HERPUD1-215ENST00000568676 KDM5DQ9BY66 1539 aa25.22■■□□□ 1.63
HERPUD1-215ENST00000568676 UBAP1LF5GYI3 381 aa25.21■■□□□ 1.63
HERPUD1-215ENST00000568676 KIF3BO15066 747 aa25.21■■□□□ 1.63
HERPUD1-215ENST00000568676 PZPP20742 1482 aa25.21■■□□□ 1.63
HERPUD1-215ENST00000568676 NCOA2Q15596 1464 aa25.21■■□□□ 1.63
HERPUD1-215ENST00000568676 CAMSAP2Q08AD1 1489 aa25.2■■□□□ 1.62
HERPUD1-215ENST00000568676 TNRQ92752 1358 aa25.19■■□□□ 1.62
HERPUD1-215ENST00000568676 WASHC2CQ9Y4E1 1318 aa25.16■■□□□ 1.62
HERPUD1-215ENST00000568676 ARHGEF5Q12774 1597 aa25.16■■□□□ 1.62
HERPUD1-215ENST00000568676 TSPY4P0CV99 314 aa25.15■■□□□ 1.62
HERPUD1-215ENST00000568676 TSPY10P0CW01 314 aa25.15■■□□□ 1.62
HERPUD1-215ENST00000568676 POLR1AO95602 1720 aaPredicted RBP25.14■■□□□ 1.61
HERPUD1-215ENST00000568676 CPS1P31327 1500 aa25.13■■□□□ 1.61
HERPUD1-215ENST00000568676 NLRP1Q9C000 1473 aa25.13■■□□□ 1.61
HERPUD1-215ENST00000568676 FBXO31Q5XUX0 539 aaPredicted RBP25.12■■□□□ 1.61
HERPUD1-215ENST00000568676 THEMISQ8N1K5 641 aaPredicted RBP25.12■■□□□ 1.61
HERPUD1-215ENST00000568676 MIA2Q96PC5 1412 aa25.11■■□□□ 1.61
HERPUD1-215ENST00000568676 ANKLE2Q86XL3 938 aa25.1■■□□□ 1.61
HERPUD1-215ENST00000568676 NEURL4Q96JN8 1562 aa25.09■■□□□ 1.61
HERPUD1-215ENST00000568676 SHANK2Q9UPX8 1470 aa25.07■■□□□ 1.6
HERPUD1-215ENST00000568676 UGGT1Q9NYU2 1555 aa25.06■■□□□ 1.6
HERPUD1-215ENST00000568676 TOM1O60784 492 aa25.06■■□□□ 1.6
HERPUD1-215ENST00000568676 MED14O60244 1454 aa25.05■■□□□ 1.6
HERPUD1-215ENST00000568676 MAST1Q9Y2H9 1570 aa25.05■■□□□ 1.6
HERPUD1-215ENST00000568676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.05■■□□□ 1.6
HERPUD1-215ENST00000568676 DEPDC5O75140 1603 aa25.04■■□□□ 1.6
HERPUD1-215ENST00000568676 LRRC9Q6ZRR7 1453 aa25.04■■□□□ 1.6
HERPUD1-215ENST00000568676 RNF17Q9BXT8 1623 aaKnown RBP25.04■■□□□ 1.6
HERPUD1-215ENST00000568676 ZC3H13Q5T200 1668 aaKnown RBP25.04■■□□□ 1.6
HERPUD1-215ENST00000568676 VPS8Q8N3P4 1428 aa25.02■■□□□ 1.6
HERPUD1-215ENST00000568676 EIF2AK4Q9P2K8 1649 aaKnown RBP25.01■■□□□ 1.59
HERPUD1-215ENST00000568676 NPHP4O75161 1426 aaPredicted RBP25■■□□□ 1.59
HERPUD1-215ENST00000568676 MAP3K1Q13233 1512 aa25■■□□□ 1.59
HERPUD1-215ENST00000568676 ABCC3O15438 1527 aa24.98■■□□□ 1.59
HERPUD1-215ENST00000568676 VWDEQ8N2E2 1590 aa24.97■■□□□ 1.59
HERPUD1-215ENST00000568676 SCAF1Q9H7N4 1312 aaKnown RBP24.95■■□□□ 1.58
HERPUD1-215ENST00000568676 MYOM3Q5VTT5 1437 aa24.94■■□□□ 1.58
HERPUD1-215ENST00000568676 HSPA1LP34931 641 aa24.93■■□□□ 1.58
HERPUD1-215ENST00000568676 PIP4K2BP78356 416 aa24.93■■□□□ 1.58
HERPUD1-215ENST00000568676 ERVK-7P63135 1459 aa24.93■■□□□ 1.58
HERPUD1-215ENST00000568676 IQGAP1P46940 1657 aa24.93■■□□□ 1.58
HERPUD1-215ENST00000568676 DUOX2Q9NRD8 1548 aa24.91■■□□□ 1.58
HERPUD1-215ENST00000568676 MROH1Q8NDA8 1641 aa24.89■■□□□ 1.57
HERPUD1-215ENST00000568676 SYNMO15061 1565 aa24.86■■□□□ 1.57
HERPUD1-215ENST00000568676 MED1Q15648 1581 aaPredicted RBP24.86■■□□□ 1.57
HERPUD1-215ENST00000568676 ARHGAP31Q2M1Z3 1444 aa24.86■■□□□ 1.57
HERPUD1-215ENST00000568676 KANK4Q5T7N3 995 aaPredicted RBP24.85■■□□□ 1.57
HERPUD1-215ENST00000568676 ERBINQ96RT1 1412 aa24.84■■□□□ 1.57
HERPUD1-215ENST00000568676 UBR1Q8IWV7 1749 aa24.83■■□□□ 1.57
HERPUD1-215ENST00000568676 PRDM15P57071 1507 aaPredicted RBP24.82■■□□□ 1.56
HERPUD1-215ENST00000568676 LRRC7Q96NW7 1537 aa24.82■■□□□ 1.56
HERPUD1-215ENST00000568676 CEP152O94986 1710 aa24.82■■□□□ 1.56
HERPUD1-215ENST00000568676 SCAF11Q99590 1463 aaKnown RBP24.82■■□□□ 1.56
HERPUD1-215ENST00000568676 KIF15Q9NS87 1388 aa24.8■■□□□ 1.56
HERPUD1-215ENST00000568676 ALKQ9UM73 1620 aa24.8■■□□□ 1.56
HERPUD1-215ENST00000568676 SLIT1O75093 1534 aa24.8■■□□□ 1.56
HERPUD1-215ENST00000568676 ARHGAP23Q9P227 1491 aa24.79■■□□□ 1.56
HERPUD1-215ENST00000568676 STRCP1A6NGW2 1772 aa24.77■■□□□ 1.56
HERPUD1-215ENST00000568676 CROCC2H7BZ55 1655 aa24.76■■□□□ 1.55
HERPUD1-215ENST00000568676 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
HERPUD1-215ENST00000568676 EID1Q9Y6B2 187 aa24.76■■□□□ 1.55
HERPUD1-215ENST00000568676 TXNDC2Q86VQ3 553 aa24.75■■□□□ 1.55
HERPUD1-215ENST00000568676 KANK1Q14678 1352 aa24.75■■□□□ 1.55
HERPUD1-215ENST00000568676 ABCC5O15440 1437 aa24.75■■□□□ 1.55
HERPUD1-215ENST00000568676 APLP2Q06481 763 aa24.74■■□□□ 1.55
HERPUD1-215ENST00000568676 PTPN23Q9H3S7 1636 aa24.72■■□□□ 1.55
HERPUD1-215ENST00000568676 PHF23Q9BUL5 403 aaPredicted RBP24.72■■□□□ 1.55
HERPUD1-215ENST00000568676 RRP7BPQ9NSQ0 103 aa24.72■■□□□ 1.55
HERPUD1-215ENST00000568676 DAPK1P53355 1430 aa24.71■■□□□ 1.55
HERPUD1-215ENST00000568676 LTKP29376 864 aa24.71■■□□□ 1.55
HERPUD1-215ENST00000568676 KDM5AP29375 1690 aaKnown RBP24.7■■□□□ 1.54
HERPUD1-215ENST00000568676 CFAP65Q6ZU64 1925 aaKnown RBP24.7■■□□□ 1.54
HERPUD1-215ENST00000568676 TMEM2Q9UHN6 1383 aa24.68■■□□□ 1.54
HERPUD1-215ENST00000568676 LMTK2Q8IWU2 1503 aa24.68■■□□□ 1.54
HERPUD1-215ENST00000568676 ANKRD30AQ9BXX3 1397 aa24.67■■□□□ 1.54
HERPUD1-215ENST00000568676 STAG3Q9UJ98 1225 aa24.67■■□□□ 1.54
HERPUD1-215ENST00000568676 PIK3C2BO00750 1634 aa24.66■■□□□ 1.54
HERPUD1-215ENST00000568676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.66■■□□□ 1.545e-14■□□□□ 8.6
HERPUD1-215ENST00000568676 FGD6Q6ZV73 1430 aa24.66■■□□□ 1.54
HERPUD1-215ENST00000568676 EFCAB6Q5THR3 1501 aa24.64■■□□□ 1.53
HERPUD1-215ENST00000568676 IDI1Q13907 227 aa24.59■■□□□ 1.53
HERPUD1-215ENST00000568676 FAM135BQ49AJ0 1406 aa24.59■■□□□ 1.53
HERPUD1-215ENST00000568676 SLC52A1Q9NWF4 448 aa24.58■■□□□ 1.53
HERPUD1-215ENST00000568676 NOS1P29475 1434 aa24.58■■□□□ 1.53
HERPUD1-215ENST00000568676 XIRP1Q702N8 1843 aaKnown RBP24.57■■□□□ 1.52
HERPUD1-215ENST00000568676 KCNA6P17658 529 aa24.57■■□□□ 1.52
HERPUD1-215ENST00000568676 ADGRL2O95490 1459 aa24.56■■□□□ 1.52
HERPUD1-215ENST00000568676 TET3O43151 1660 aa24.55■■□□□ 1.52
HERPUD1-215ENST00000568676 RPRD2Q5VT52 1461 aaKnown RBP24.54■■□□□ 1.52
HERPUD1-215ENST00000568676 SENP3Q9H4L4 574 aaPredicted RBP24.54■■□□□ 1.52
HERPUD1-215ENST00000568676 CHIC2Q9UKJ5 165 aa24.54■■□□□ 1.52
HERPUD1-215ENST00000568676 ADGRB3O60242 1522 aa24.54■■□□□ 1.52
HERPUD1-215ENST00000568676 TMEM94Q12767 1356 aa24.54■■□□□ 1.52
HERPUD1-215ENST00000568676 NKTRP30414 1462 aaKnown RBP24.52■■□□□ 1.52
HERPUD1-215ENST00000568676 PROSER2Q86WR7 435 aaPredicted RBP24.49■■□□□ 1.51
HERPUD1-215ENST00000568676 HDGFP51858 240 aaKnown RBP24.48■■□□□ 1.51
HERPUD1-215ENST00000568676 NWD1Q149M9 1564 aa24.48■■□□□ 1.51
HERPUD1-215ENST00000568676 SLC26A8Q96RN1 970 aa24.48■■□□□ 1.51
HERPUD1-215ENST00000568676 ANKRD50Q9ULJ7 1429 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms