RNA–Protein interactions for RNA: ENST00000568672.1

NAE1-219, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-219ENST00000568672 PLCG2P16885 1265 aa12.92□□□□□ -0.34
NAE1-219ENST00000568672 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
NAE1-219ENST00000568672 PKD2Q13563 968 aa12.91□□□□□ -0.34
NAE1-219ENST00000568672 CABP2Q9NPB3 220 aa12.91□□□□□ -0.34
NAE1-219ENST00000568672 MAGI3Q5TCQ9 1506 aa12.9□□□□□ -0.34
NAE1-219ENST00000568672 FYCO1Q9BQS8 1478 aa12.9□□□□□ -0.34
NAE1-219ENST00000568672 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
NAE1-219ENST00000568672 GLI2P10070 1586 aa12.89□□□□□ -0.35
NAE1-219ENST00000568672 VPS8Q8N3P4 1428 aa12.88□□□□□ -0.35
NAE1-219ENST00000568672 TSPOAP1O95153 1857 aa12.87□□□□□ -0.35
NAE1-219ENST00000568672 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
NAE1-219ENST00000568672 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
NAE1-219ENST00000568672 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
NAE1-219ENST00000568672 PPRC1Q5VV67 1664 aaKnown RBP12.85□□□□□ -0.35
NAE1-219ENST00000568672 TROQ12816 1431 aaPredicted RBP12.85□□□□□ -0.35
NAE1-219ENST00000568672 CD109Q6YHK3 1445 aa12.85□□□□□ -0.35
NAE1-219ENST00000568672 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
NAE1-219ENST00000568672 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
NAE1-219ENST00000568672 KIF14Q15058 1648 aa12.84□□□□□ -0.35
NAE1-219ENST00000568672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.83□□□□□ -0.35
NAE1-219ENST00000568672 KANK4Q5T7N3 995 aaPredicted RBP12.83□□□□□ -0.36
NAE1-219ENST00000568672 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
NAE1-219ENST00000568672 SCUBE2Q9NQ36 999 aa12.83□□□□□ -0.36
NAE1-219ENST00000568672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
NAE1-219ENST00000568672 CCDC18Q5T9S5 1454 aa12.83□□□□□ -0.36
NAE1-219ENST00000568672 RGL2O15211 777 aa12.82□□□□□ -0.36
NAE1-219ENST00000568672 CDK11AQ9UQ88 783 aaPredicted RBP12.82□□□□□ -0.36
NAE1-219ENST00000568672 TTC37Q6PGP7 1564 aa12.81□□□□□ -0.36
NAE1-219ENST00000568672 COL17A1Q9UMD9 1497 aaPredicted RBP12.81□□□□□ -0.36
NAE1-219ENST00000568672 ABCA9Q8IUA7 1624 aa12.8□□□□□ -0.36
NAE1-219ENST00000568672 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
NAE1-219ENST00000568672 EFCAB3Q8N7B9 438 aa12.79□□□□□ -0.36
NAE1-219ENST00000568672 CFAP43Q8NDM7 1665 aa12.78□□□□□ -0.36
NAE1-219ENST00000568672 TIAM1Q13009 1591 aa12.77□□□□□ -0.36
NAE1-219ENST00000568672 MTUS2Q5JR59 1369 aa12.77□□□□□ -0.37
NAE1-219ENST00000568672 PPARGC1BQ86YN6 1023 aaKnown RBP12.76□□□□□ -0.37
NAE1-219ENST00000568672 PLCH2O75038 1416 aa12.75□□□□□ -0.37
NAE1-219ENST00000568672 LRRC9Q6ZRR7 1453 aa12.74□□□□□ -0.37
NAE1-219ENST00000568672 DPY19L2Q6NUT2 758 aa12.74□□□□□ -0.37
NAE1-219ENST00000568672 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
NAE1-219ENST00000568672 TEX14Q8IWB6 1497 aa12.73□□□□□ -0.37
NAE1-219ENST00000568672 RAPGEF3O95398 923 aa12.72□□□□□ -0.37
NAE1-219ENST00000568672 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
NAE1-219ENST00000568672 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
NAE1-219ENST00000568672 EHBP1L1Q8N3D4 1523 aa12.72□□□□□ -0.37
NAE1-219ENST00000568672 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
NAE1-219ENST00000568672 AKNAQ7Z591 1439 aa12.71□□□□□ -0.37
NAE1-219ENST00000568672 KDM6BO15054 1643 aa12.71□□□□□ -0.37
NAE1-219ENST00000568672 STK25O00506 426 aa12.71□□□□□ -0.37
NAE1-219ENST00000568672 ZNF777Q9ULD5 760 aaPredicted RBP12.71□□□□□ -0.37
NAE1-219ENST00000568672 MAP3K1Q13233 1512 aa12.71□□□□□ -0.38
NAE1-219ENST00000568672 FANCAO15360 1455 aa12.71□□□□□ -0.38
NAE1-219ENST00000568672 NCOA2Q15596 1464 aa12.71□□□□□ -0.38
NAE1-219ENST00000568672 ZNF644Q9H582 1327 aaPredicted RBP12.7□□□□□ -0.38
NAE1-219ENST00000568672 EFCAB2Q5VUJ9 269 aa12.7□□□□□ -0.38
NAE1-219ENST00000568672 CCNB3Q8WWL7 1395 aa12.69□□□□□ -0.38
NAE1-219ENST00000568672 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
NAE1-219ENST00000568672 ARHGAP5Q13017 1502 aa12.68□□□□□ -0.38
NAE1-219ENST00000568672 NEO1Q92859 1461 aa12.68□□□□□ -0.38
NAE1-219ENST00000568672 SLAIN1Q8ND83 568 aa12.68□□□□□ -0.38
NAE1-219ENST00000568672 MYO5CQ9NQX4 1742 aa12.68□□□□□ -0.38
NAE1-219ENST00000568672 CDC42BPBQ9Y5S2 1711 aa12.68□□□□□ -0.38
NAE1-219ENST00000568672 ARHGEF12Q9NZN5 1544 aa12.67□□□□□ -0.38
NAE1-219ENST00000568672 CFDP1Q9UEE9 299 aaPredicted RBP12.67□□□□□ -0.38
NAE1-219ENST00000568672 SCAPERQ9BY12 1400 aa12.67□□□□□ -0.38
NAE1-219ENST00000568672 CDC42BPAQ5VT25 1732 aa12.67□□□□□ -0.38
NAE1-219ENST00000568672 ARAP3Q8WWN8 1544 aa12.67□□□□□ -0.38
NAE1-219ENST00000568672 HNRNPMP52272 730 aaKnown RBP eCLIP12.66□□□□□ -0.38
NAE1-219ENST00000568672 L3MBTL3Q96JM7 780 aaPredicted RBP12.66□□□□□ -0.38
NAE1-219ENST00000568672 PREX2Q70Z35 1606 aa12.66□□□□□ -0.38
NAE1-219ENST00000568672 FRMPD1Q5SYB0 1578 aa12.65□□□□□ -0.38
NAE1-219ENST00000568672 AFAP1Q8N556 730 aa12.65□□□□□ -0.38
NAE1-219ENST00000568672 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
NAE1-219ENST00000568672 PHLDB1Q86UU1 1377 aa12.65□□□□□ -0.38
NAE1-219ENST00000568672 ADGRL1O94910 1474 aa12.65□□□□□ -0.38
NAE1-219ENST00000568672 TRAPPC8Q9Y2L5 1435 aa12.64□□□□□ -0.39
NAE1-219ENST00000568672 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.64□□□□□ -0.39
NAE1-219ENST00000568672 SUPT6HQ7KZ85 1726 aaKnown RBP12.64□□□□□ -0.39
NAE1-219ENST00000568672 DENND4BO75064 1496 aaPredicted RBP12.64□□□□□ -0.39
NAE1-219ENST00000568672 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
NAE1-219ENST00000568672 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
NAE1-219ENST00000568672 SOX12O15370 315 aa12.62□□□□□ -0.39
NAE1-219ENST00000568672 G3V3G9 751 aa12.61□□□□□ -0.39
NAE1-219ENST00000568672 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
NAE1-219ENST00000568672 ABCC1P33527 1531 aa12.6□□□□□ -0.39
NAE1-219ENST00000568672 POGZQ7Z3K3 1410 aa12.6□□□□□ -0.39
NAE1-219ENST00000568672 CFAP74Q9C0B2 1584 aa12.6□□□□□ -0.39
NAE1-219ENST00000568672 BOLA1Q9Y3E2 137 aa12.59□□□□□ -0.39
NAE1-219ENST00000568672 MYOM3Q5VTT5 1437 aa12.59□□□□□ -0.39
NAE1-219ENST00000568672 YEATS2Q9ULM3 1422 aa12.59□□□□□ -0.39
NAE1-219ENST00000568672 RICTORQ6R327 1708 aa12.59□□□□□ -0.39
NAE1-219ENST00000568672 SYCP2Q9BX26 1530 aa12.58□□□□□ -0.4
NAE1-219ENST00000568672 FAM163AQ96GL9 167 aaPredicted RBP12.58□□□□□ -0.4
NAE1-219ENST00000568672 CAMSAP2Q08AD1 1489 aa12.57□□□□□ -0.4
NAE1-219ENST00000568672 MBD5Q9P267 1494 aa12.57□□□□□ -0.4
NAE1-219ENST00000568672 ITSN2Q9NZM3 1697 aa12.56□□□□□ -0.4
NAE1-219ENST00000568672 KIAA1107Q9UPP5 1409 aa12.55□□□□□ -0.4
NAE1-219ENST00000568672 NLRP6P59044 892 aa12.55□□□□□ -0.4
NAE1-219ENST00000568672 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
NAE1-219ENST00000568672 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms