RNA–Protein interactions for RNA: ENST00000568530.5

PDPR-210, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPR, Length 7,223 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-210ENST00000568530 CCNB3Q8WWL7 1395 aa10.55□□□□□ -0.72
PDPR-210ENST00000568530 MSNP26038 577 aaKnown RBP10.55□□□□□ -0.72
PDPR-210ENST00000568530 GRM1Q13255 1194 aa10.55□□□□□ -0.72
PDPR-210ENST00000568530 R3HCC1Q9Y3T6 440 aaKnown RBP10.55□□□□□ -0.72
PDPR-210ENST00000568530 FAM177BA6PVY3 158 aa10.55□□□□□ -0.72
PDPR-210ENST00000568530 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
PDPR-210ENST00000568530 CCAR2Q8N163 923 aaKnown RBP10.55□□□□□ -0.72
PDPR-210ENST00000568530 KIF27Q86VH2 1401 aa10.55□□□□□ -0.72
PDPR-210ENST00000568530 MORC1Q86VD1 984 aa10.55□□□□□ -0.72
PDPR-210ENST00000568530 GOLGA6L1Q8N7Z2 621 aa10.55□□□□□ -0.72
PDPR-210ENST00000568530 TNIKQ9UKE5 1360 aa10.54□□□□□ -0.72
PDPR-210ENST00000568530 NUTM2BA6NNL0 878 aaPredicted RBP10.54□□□□□ -0.72
PDPR-210ENST00000568530 NUTM2EB1AL46 878 aaPredicted RBP10.54□□□□□ -0.72
PDPR-210ENST00000568530 NUTM2AQ8IVF1 878 aaPredicted RBP10.54□□□□□ -0.72
PDPR-210ENST00000568530 TPM4P67936 248 aa10.54□□□□□ -0.72
PDPR-210ENST00000568530 AMOTL1Q8IY63 956 aa10.54□□□□□ -0.72
PDPR-210ENST00000568530 CDCA8Q53HL2 280 aa10.53□□□□□ -0.72
PDPR-210ENST00000568530 TMF1P82094 1093 aa10.53□□□□□ -0.72
PDPR-210ENST00000568530 FOXD4L6Q3SYB3 417 aaPredicted RBP10.53□□□□□ -0.72
PDPR-210ENST00000568530 FOXD4L3Q6VB84 417 aaPredicted RBP10.53□□□□□ -0.72
PDPR-210ENST00000568530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.53□□□□□ -0.728e-7■■□□□ 11.5
PDPR-210ENST00000568530 AMPHP49418 695 aa10.53□□□□□ -0.72
PDPR-210ENST00000568530 RBM33Q96EV2 1170 aaKnown RBP10.53□□□□□ -0.72
PDPR-210ENST00000568530 WWC2Q6AWC2 1192 aa10.52□□□□□ -0.72
PDPR-210ENST00000568530 ITPRIPQ8IWB1 547 aa10.52□□□□□ -0.73
PDPR-210ENST00000568530 USP35Q9P2H5 1018 aa10.52□□□□□ -0.73
PDPR-210ENST00000568530 AKAP17AQ02040 695 aaKnown RBP10.52□□□□□ -0.73
PDPR-210ENST00000568530 ODF2Q5BJF6 829 aa10.52□□□□□ -0.73
PDPR-210ENST00000568530 TNNT3P45378 269 aaPredicted RBP10.52□□□□□ -0.73
PDPR-210ENST00000568530 CECR2Q9BXF3 1484 aa10.51□□□□□ -0.73
PDPR-210ENST00000568530 APPP05067 770 aa10.51□□□□□ -0.73
PDPR-210ENST00000568530 GPATCH3Q96I76 525 aa10.51□□□□□ -0.73
PDPR-210ENST00000568530 MFAP1P55081 439 aaKnown RBP10.51□□□□□ -0.73
PDPR-210ENST00000568530 ROCK2O75116 1388 aaKnown RBP10.51□□□□□ -0.73
PDPR-210ENST00000568530 TPM3P06753 285 aa10.51□□□□□ -0.73
PDPR-210ENST00000568530 HDGFL2Q7Z4V5 671 aaPredicted RBP10.51□□□□□ -0.73
PDPR-210ENST00000568530 NECTIN2Q92692 538 aa10.51□□□□□ -0.73
PDPR-210ENST00000568530 EID1Q9Y6B2 187 aa10.51□□□□□ -0.73
PDPR-210ENST00000568530 FOSBP53539 338 aa10.51□□□□□ -0.73
PDPR-210ENST00000568530 ARHGAP35Q9NRY4 1499 aa10.5□□□□□ -0.73
PDPR-210ENST00000568530 SF3A1Q15459 793 aaKnown RBP10.5□□□□□ -0.73
PDPR-210ENST00000568530 CT47A1Q5JQC4 288 aaPredicted RBP10.5□□□□□ -0.73
PDPR-210ENST00000568530 BCL11BQ9C0K0 894 aaPredicted RBP10.5□□□□□ -0.73
PDPR-210ENST00000568530 SETD5Q9C0A6 1442 aa10.5□□□□□ -0.73
PDPR-210ENST00000568530 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDPR-210ENST00000568530 TSHZ2Q9NRE2 1034 aa10.49□□□□□ -0.73
PDPR-210ENST00000568530 CUX2O14529 1486 aa10.49□□□□□ -0.73
PDPR-210ENST00000568530 CA8P35219 290 aa10.49□□□□□ -0.73
PDPR-210ENST00000568530 SKIDA1Q1XH10 827 aa10.48□□□□□ -0.73
PDPR-210ENST00000568530 CCDC27Q2M243 656 aa10.48□□□□□ -0.73
PDPR-210ENST00000568530 PRDM2Q13029 1718 aa10.48□□□□□ -0.73
PDPR-210ENST00000568530 RCAN3Q9UKA8 241 aa10.48□□□□□ -0.73
PDPR-210ENST00000568530 PLIN1O60240 522 aa10.48□□□□□ -0.73
PDPR-210ENST00000568530 PKD2Q13563 968 aa10.48□□□□□ -0.73
PDPR-210ENST00000568530 TMEM87AQ8NBN3 555 aa10.48□□□□□ -0.73
PDPR-210ENST00000568530 STK31Q9BXU1 1019 aa10.47□□□□□ -0.73
PDPR-210ENST00000568530 RAB3GAP2Q9H2M9 1393 aa10.47□□□□□ -0.73
PDPR-210ENST00000568530 CLUAP1Q96AJ1 413 aa10.47□□□□□ -0.73
PDPR-210ENST00000568530 EEA1Q15075 1411 aa10.47□□□□□ -0.73
PDPR-210ENST00000568530 TCERG1O14776 1098 aaKnown RBP10.47□□□□□ -0.73
PDPR-210ENST00000568530 ZNF428Q96B54 188 aa10.46□□□□□ -0.73
PDPR-210ENST00000568530 CHMP4BQ9H444 224 aaKnown RBP10.46□□□□□ -0.73
PDPR-210ENST00000568530 CCDC88BA6NC98 1476 aa10.46□□□□□ -0.73
PDPR-210ENST00000568530 SPAG9O60271 1321 aaKnown RBP10.46□□□□□ -0.73
PDPR-210ENST00000568530 RRP7AQ9Y3A4 280 aaKnown RBP10.46□□□□□ -0.73
PDPR-210ENST00000568530 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.74
PDPR-210ENST00000568530 MCTP1Q6DN14 999 aa10.46□□□□□ -0.74
PDPR-210ENST00000568530 NAP1L1P55209 391 aaKnown RBP10.45□□□□□ -0.74
PDPR-210ENST00000568530 KTN1Q86UP2 1357 aaKnown RBP10.45□□□□□ -0.74
PDPR-210ENST00000568530 ECM2O94769 699 aaPredicted RBP10.45□□□□□ -0.74
PDPR-210ENST00000568530 TPM2P07951 284 aa10.45□□□□□ -0.74
PDPR-210ENST00000568530 KANK1Q14678 1352 aa10.45□□□□□ -0.74
PDPR-210ENST00000568530 ATP2B2Q01814 1243 aa10.45□□□□□ -0.74
PDPR-210ENST00000568530 EIF2S2P20042 333 aaKnown RBP10.45□□□□□ -0.74
PDPR-210ENST00000568530 CCDC34Q96HJ3 373 aa10.45□□□□□ -0.74
PDPR-210ENST00000568530 H3BQV1 296 aa10.45□□□□□ -0.74
PDPR-210ENST00000568530 RRP12Q5JTH9 1297 aaKnown RBP10.45□□□□□ -0.74
PDPR-210ENST00000568530 C1orf141Q5JVX7 400 aa10.45□□□□□ -0.74
PDPR-210ENST00000568530 IFFO2Q5TF58 517 aa10.45□□□□□ -0.74
PDPR-210ENST00000568530 U2AF1L5P0DN76 240 aaPredicted RBP10.44□□□□□ -0.74
PDPR-210ENST00000568530 U2AF1Q01081 240 aaKnown RBP eCLIP10.44□□□□□ -0.74
PDPR-210ENST00000568530 PODXL2Q9NZ53 605 aa10.44□□□□□ -0.74
PDPR-210ENST00000568530 RBM5P52756 815 aaKnown RBP eCLIP10.43□□□□□ -0.74
PDPR-210ENST00000568530 DHX37Q8IY37 1157 aaKnown RBP10.43□□□□□ -0.74
PDPR-210ENST00000568530 HSP90AB2PQ58FF8 381 aa10.43□□□□□ -0.74
PDPR-210ENST00000568530 STK11IPQ8N1F8 1099 aa10.43□□□□□ -0.74
PDPR-210ENST00000568530 TTC16Q8NEE8 873 aa10.43□□□□□ -0.74
PDPR-210ENST00000568530 HTATSF1O43719 755 aaKnown RBP10.42□□□□□ -0.74
PDPR-210ENST00000568530 RILPL2Q969X0 211 aa10.42□□□□□ -0.74
PDPR-210ENST00000568530 HNRNPMP52272 730 aaKnown RBP eCLIP10.42□□□□□ -0.74
PDPR-210ENST00000568530 MPHOSPH9Q99550 1183 aa10.42□□□□□ -0.74
PDPR-210ENST00000568530 CARMIL1Q5VZK9 1371 aa10.42□□□□□ -0.74
PDPR-210ENST00000568530 SYNE3Q6ZMZ3 975 aa10.42□□□□□ -0.74
PDPR-210ENST00000568530 BCL2L13Q9BXK5 485 aa10.42□□□□□ -0.74
PDPR-210ENST00000568530 CHMP4CQ96CF2 233 aa10.42□□□□□ -0.74
PDPR-210ENST00000568530 RSPH4AQ5TD94 716 aa10.41□□□□□ -0.74
PDPR-210ENST00000568530 TTC5Q8N0Z6 440 aa10.41□□□□□ -0.74
PDPR-210ENST00000568530 WDR78Q5VTH9 848 aa10.41□□□□□ -0.74
PDPR-210ENST00000568530 NACADO15069 1562 aa10.41□□□□□ -0.74
PDPR-210ENST00000568530 NFXL1Q6ZNB6 911 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms