RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
RPAP1-211ENST00000568413 PTPRKQ15262 1439 aa13.44□□□□□ -0.26
RPAP1-211ENST00000568413 ROCK1Q13464 1354 aa13.44□□□□□ -0.26
RPAP1-211ENST00000568413 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
RPAP1-211ENST00000568413 ADGRL2O95490 1459 aa13.43□□□□□ -0.26
RPAP1-211ENST00000568413 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
RPAP1-211ENST00000568413 ESF1Q9H501 851 aaKnown RBP13.43□□□□□ -0.26
RPAP1-211ENST00000568413 KIF3BO15066 747 aa13.42□□□□□ -0.26
RPAP1-211ENST00000568413 CERKQ8TCT0 537 aa13.42□□□□□ -0.26
RPAP1-211ENST00000568413 DUOX2Q9NRD8 1548 aa13.42□□□□□ -0.26
RPAP1-211ENST00000568413 MROH2AA6NES4 1674 aa13.41□□□□□ -0.26
RPAP1-211ENST00000568413 GGT6Q6P531 493 aa13.4□□□□□ -0.26
RPAP1-211ENST00000568413 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
RPAP1-211ENST00000568413 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
RPAP1-211ENST00000568413 ERBINQ96RT1 1412 aa13.38□□□□□ -0.27
RPAP1-211ENST00000568413 ANKRD50Q9ULJ7 1429 aa13.37□□□□□ -0.27
RPAP1-211ENST00000568413 ZMYM3Q14202 1370 aa13.36□□□□□ -0.27
RPAP1-211ENST00000568413 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
RPAP1-211ENST00000568413 MYO3AQ8NEV4 1616 aa13.36□□□□□ -0.27
RPAP1-211ENST00000568413 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
RPAP1-211ENST00000568413 ZNF142P52746 1687 aaPredicted RBP13.34□□□□□ -0.27
RPAP1-211ENST00000568413 NPATQ14207 1427 aa13.33□□□□□ -0.28
RPAP1-211ENST00000568413 WASHC2CQ9Y4E1 1318 aa13.33□□□□□ -0.28
RPAP1-211ENST00000568413 HFM1A2PYH4 1435 aa13.32□□□□□ -0.28
RPAP1-211ENST00000568413 PTPRTO14522 1441 aa13.32□□□□□ -0.28
RPAP1-211ENST00000568413 NAIPQ13075 1403 aa13.32□□□□□ -0.28
RPAP1-211ENST00000568413 TRIM26Q12899 539 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-211ENST00000568413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
RPAP1-211ENST00000568413 DMRT2Q9Y5R5 561 aa13.32□□□□□ -0.28
RPAP1-211ENST00000568413 NCKAP5LQ9HCH0 1330 aa13.32□□□□□ -0.28
RPAP1-211ENST00000568413 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
RPAP1-211ENST00000568413 KANK1Q14678 1352 aa13.32□□□□□ -0.28
RPAP1-211ENST00000568413 LTBP4Q8N2S1 1624 aa13.31□□□□□ -0.28
RPAP1-211ENST00000568413 RNF17Q9BXT8 1623 aaKnown RBP13.3□□□□□ -0.28
RPAP1-211ENST00000568413 ACIN1Q9UKV3 1341 aaKnown RBP13.29□□□□□ -0.28
RPAP1-211ENST00000568413 FAM135AQ9P2D6 1515 aa13.29□□□□□ -0.28
RPAP1-211ENST00000568413 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
RPAP1-211ENST00000568413 FBXO31Q5XUX0 539 aaPredicted RBP13.27□□□□□ -0.29
RPAP1-211ENST00000568413 DEPDC5O75140 1603 aa13.26□□□□□ -0.29
RPAP1-211ENST00000568413 GCC2Q8IWJ2 1684 aa13.26□□□□□ -0.29
RPAP1-211ENST00000568413 KDM5DQ9BY66 1539 aa13.26□□□□□ -0.29
RPAP1-211ENST00000568413 ZNF335Q9H4Z2 1342 aaPredicted RBP13.26□□□□□ -0.29
RPAP1-211ENST00000568413 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
RPAP1-211ENST00000568413 PRDM15P57071 1507 aaPredicted RBP13.25□□□□□ -0.29
RPAP1-211ENST00000568413 NUP155O75694 1391 aa13.25□□□□□ -0.29
RPAP1-211ENST00000568413 TRIM52Q96A61 297 aa13.25□□□□□ -0.29
RPAP1-211ENST00000568413 HRCP23327 699 aa13.24□□□□□ -0.29
RPAP1-211ENST00000568413 ABCC3O15438 1527 aa13.23□□□□□ -0.29
RPAP1-211ENST00000568413 A2ML1A8K2U0 1454 aa13.23□□□□□ -0.29
RPAP1-211ENST00000568413 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
RPAP1-211ENST00000568413 ZC3H13Q5T200 1668 aaKnown RBP13.23□□□□□ -0.29
RPAP1-211ENST00000568413 VWDEQ8N2E2 1590 aa13.23□□□□□ -0.29
RPAP1-211ENST00000568413 POLR1AO95602 1720 aaPredicted RBP13.22□□□□□ -0.29
RPAP1-211ENST00000568413 TNRQ92752 1358 aa13.22□□□□□ -0.29
RPAP1-211ENST00000568413 UNC13BO14795 1591 aa13.22□□□□□ -0.29
RPAP1-211ENST00000568413 PZPP20742 1482 aa13.22□□□□□ -0.29
RPAP1-211ENST00000568413 CEP152O94986 1710 aa13.22□□□□□ -0.29
RPAP1-211ENST00000568413 CFAP65Q6ZU64 1925 aaKnown RBP13.21□□□□□ -0.29
RPAP1-211ENST00000568413 NEURL4Q96JN8 1562 aa13.21□□□□□ -0.29
RPAP1-211ENST00000568413 LMTK2Q8IWU2 1503 aa13.21□□□□□ -0.29
RPAP1-211ENST00000568413 ARHGAP31Q2M1Z3 1444 aa13.21□□□□□ -0.3
RPAP1-211ENST00000568413 RAB3GAP2Q9H2M9 1393 aa13.2□□□□□ -0.3
RPAP1-211ENST00000568413 PKD2Q13563 968 aa13.19□□□□□ -0.3
RPAP1-211ENST00000568413 IQGAP3Q86VI3 1631 aa13.18□□□□□ -0.3
RPAP1-211ENST00000568413 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
RPAP1-211ENST00000568413 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
RPAP1-211ENST00000568413 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
RPAP1-211ENST00000568413 TET3O43151 1660 aa13.16□□□□□ -0.3
RPAP1-211ENST00000568413 RPRD2Q5VT52 1461 aaKnown RBP13.16□□□□□ -0.3
RPAP1-211ENST00000568413 EFCAB6Q5THR3 1501 aa13.15□□□□□ -0.3
RPAP1-211ENST00000568413 UBAP1LF5GYI3 381 aa13.15□□□□□ -0.3
RPAP1-211ENST00000568413 ILDR2Q71H61 639 aa13.15□□□□□ -0.3
RPAP1-211ENST00000568413 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
RPAP1-211ENST00000568413 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
RPAP1-211ENST00000568413 UGGT1Q9NYU2 1555 aa13.15□□□□□ -0.3
RPAP1-211ENST00000568413 ERVK-7P63135 1459 aa13.13□□□□□ -0.31
RPAP1-211ENST00000568413 PCGF6Q9BYE7 350 aa13.13□□□□□ -0.31
RPAP1-211ENST00000568413 NLRP1Q9C000 1473 aa13.12□□□□□ -0.31
RPAP1-211ENST00000568413 SLC52A1Q9NWF4 448 aa13.12□□□□□ -0.31
RPAP1-211ENST00000568413 STRCP1A6NGW2 1772 aa13.11□□□□□ -0.31
RPAP1-211ENST00000568413 NOS1P29475 1434 aa13.11□□□□□ -0.31
RPAP1-211ENST00000568413 E9PCH4 1651 aa13.11□□□□□ -0.31
RPAP1-211ENST00000568413 IQGAP1P46940 1657 aa13.1□□□□□ -0.31
RPAP1-211ENST00000568413 NPHP4O75161 1426 aaPredicted RBP13.1□□□□□ -0.31
RPAP1-211ENST00000568413 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
RPAP1-211ENST00000568413 IDI1Q13907 227 aa13.09□□□□□ -0.31
RPAP1-211ENST00000568413 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
RPAP1-211ENST00000568413 ANKLE2Q86XL3 938 aa13.08□□□□□ -0.32
RPAP1-211ENST00000568413 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
RPAP1-211ENST00000568413 PIP4K2BP78356 416 aa13.07□□□□□ -0.32
RPAP1-211ENST00000568413 FOXD1Q16676 465 aa13.07□□□□□ -0.32
RPAP1-211ENST00000568413 STAG3Q9UJ98 1225 aa13.07□□□□□ -0.32
RPAP1-211ENST00000568413 CPS1P31327 1500 aa13.07□□□□□ -0.32
RPAP1-211ENST00000568413 MED14O60244 1454 aa13.06□□□□□ -0.32
RPAP1-211ENST00000568413 SYNMO15061 1565 aa13.05□□□□□ -0.32
RPAP1-211ENST00000568413 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
RPAP1-211ENST00000568413 ALKQ9UM73 1620 aa13.05□□□□□ -0.32
RPAP1-211ENST00000568413 SENP3Q9H4L4 574 aaPredicted RBP13.04□□□□□ -0.32
RPAP1-211ENST00000568413 SPHKAPQ2M3C7 1700 aa13.04□□□□□ -0.32
RPAP1-211ENST00000568413 HSPA1LP34931 641 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms