RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 FGD6Q6ZV73 1430 aa11.08□□□□□ -0.64
SMPD3-210ENST00000567811 PPARGC1BQ86YN6 1023 aaKnown RBP11.07□□□□□ -0.64
SMPD3-210ENST00000567811 STRCQ7RTU9 1775 aa11.07□□□□□ -0.64
SMPD3-210ENST00000567811 PTPRKQ15262 1439 aa11.07□□□□□ -0.64
SMPD3-210ENST00000567811 TCOF1Q13428 1488 aaKnown RBP11.06□□□□□ -0.64
SMPD3-210ENST00000567811 DAPK1P53355 1430 aa11.05□□□□□ -0.64
SMPD3-210ENST00000567811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMPD3-210ENST00000567811 DUOX2Q9NRD8 1548 aa11.04□□□□□ -0.64
SMPD3-210ENST00000567811 ANKRD30AQ9BXX3 1397 aa11.04□□□□□ -0.64
SMPD3-210ENST00000567811 DNMT1P26358 1616 aaKnown RBP11.03□□□□□ -0.64
SMPD3-210ENST00000567811 CERKQ8TCT0 537 aa11.03□□□□□ -0.64
SMPD3-210ENST00000567811 FBXO41Q8TF61 875 aa11.03□□□□□ -0.64
SMPD3-210ENST00000567811 NCKAP5LQ9HCH0 1330 aa11.03□□□□□ -0.64
SMPD3-210ENST00000567811 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
SMPD3-210ENST00000567811 PKD2Q13563 968 aa11.02□□□□□ -0.65
SMPD3-210ENST00000567811 THEMISQ8N1K5 641 aaPredicted RBP11.02□□□□□ -0.65
SMPD3-210ENST00000567811 CROCC2H7BZ55 1655 aa11.01□□□□□ -0.65
SMPD3-210ENST00000567811 NCOA1Q15788 1441 aa11.01□□□□□ -0.65
SMPD3-210ENST00000567811 SHANK2Q9UPX8 1470 aa11.01□□□□□ -0.65
SMPD3-210ENST00000567811 KDM5DQ9BY66 1539 aa11.01□□□□□ -0.65
SMPD3-210ENST00000567811 FAM135AQ9P2D6 1515 aa11.01□□□□□ -0.65
SMPD3-210ENST00000567811 EIF2AK4Q9P2K8 1649 aaKnown RBP11.01□□□□□ -0.65
SMPD3-210ENST00000567811 TNRQ92752 1358 aa11.01□□□□□ -0.65
SMPD3-210ENST00000567811 PTPRTO14522 1441 aa11.01□□□□□ -0.65
SMPD3-210ENST00000567811 CAMSAP1Q5T5Y3 1602 aa11□□□□□ -0.65
SMPD3-210ENST00000567811 PZPP20742 1482 aa11□□□□□ -0.65
SMPD3-210ENST00000567811 RNF17Q9BXT8 1623 aaKnown RBP10.99□□□□□ -0.65
SMPD3-210ENST00000567811 ANKLE2Q86XL3 938 aa10.99□□□□□ -0.65
SMPD3-210ENST00000567811 KANK1Q14678 1352 aa10.99□□□□□ -0.65
SMPD3-210ENST00000567811 ERBINQ96RT1 1412 aa10.99□□□□□ -0.65
SMPD3-210ENST00000567811 ITGAEP38570 1179 aa10.98□□□□□ -0.65
SMPD3-210ENST00000567811 A2ML1A8K2U0 1454 aa10.98□□□□□ -0.65
SMPD3-210ENST00000567811 CEP170BQ9Y4F5 1589 aaPredicted RBP10.97□□□□□ -0.65
SMPD3-210ENST00000567811 MYO3AQ8NEV4 1616 aa10.97□□□□□ -0.65
SMPD3-210ENST00000567811 CEP152O94986 1710 aa10.97□□□□□ -0.65
SMPD3-210ENST00000567811 ZNF142P52746 1687 aaPredicted RBP10.96□□□□□ -0.65
SMPD3-210ENST00000567811 ZC3H13Q5T200 1668 aaKnown RBP10.96□□□□□ -0.65
SMPD3-210ENST00000567811 ABCC3O15438 1527 aa10.96□□□□□ -0.65
SMPD3-210ENST00000567811 MROH1Q8NDA8 1641 aa10.95□□□□□ -0.66
SMPD3-210ENST00000567811 ADGRL2O95490 1459 aa10.94□□□□□ -0.66
SMPD3-210ENST00000567811 PLA2R1Q13018 1463 aa10.94□□□□□ -0.66
SMPD3-210ENST00000567811 NLRP1Q9C000 1473 aa10.94□□□□□ -0.66
SMPD3-210ENST00000567811 ANKRD50Q9ULJ7 1429 aa10.94□□□□□ -0.66
SMPD3-210ENST00000567811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMPD3-210ENST00000567811 ARHGAP31Q2M1Z3 1444 aa10.93□□□□□ -0.66
SMPD3-210ENST00000567811 STAG3Q9UJ98 1225 aa10.93□□□□□ -0.66
SMPD3-210ENST00000567811 DEPDC5O75140 1603 aa10.92□□□□□ -0.66
SMPD3-210ENST00000567811 SPATA31D1Q6ZQQ2 1576 aa10.92□□□□□ -0.66
SMPD3-210ENST00000567811 UGGT1Q9NYU2 1555 aa10.92□□□□□ -0.66
SMPD3-210ENST00000567811 IDI1Q13907 227 aa10.92□□□□□ -0.66
SMPD3-210ENST00000567811 ROCK1Q13464 1354 aa10.91□□□□□ -0.66
SMPD3-210ENST00000567811 TXNDC2Q86VQ3 553 aa10.91□□□□□ -0.66
SMPD3-210ENST00000567811 ERVK-7P63135 1459 aa10.91□□□□□ -0.66
SMPD3-210ENST00000567811 ZNF335Q9H4Z2 1342 aaPredicted RBP10.9□□□□□ -0.66
SMPD3-210ENST00000567811 PRDM15P57071 1507 aaPredicted RBP10.9□□□□□ -0.66
SMPD3-210ENST00000567811 SLC52A1Q9NWF4 448 aa10.9□□□□□ -0.66
SMPD3-210ENST00000567811 EID1Q9Y6B2 187 aa10.89□□□□□ -0.67
SMPD3-210ENST00000567811 POLR1AO95602 1720 aaPredicted RBP10.89□□□□□ -0.67
SMPD3-210ENST00000567811 LMTK2Q8IWU2 1503 aa10.89□□□□□ -0.67
SMPD3-210ENST00000567811 LTBP4Q8N2S1 1624 aa10.88□□□□□ -0.67
SMPD3-210ENST00000567811 LTKP29376 864 aa10.88□□□□□ -0.67
SMPD3-210ENST00000567811 VWDEQ8N2E2 1590 aa10.88□□□□□ -0.67
SMPD3-210ENST00000567811 UBR1Q8IWV7 1749 aa10.87□□□□□ -0.67
SMPD3-210ENST00000567811 NUP155O75694 1391 aa10.87□□□□□ -0.67
SMPD3-210ENST00000567811 RRBP1Q9P2E9 1410 aaKnown RBP10.86□□□□□ -0.67
SMPD3-210ENST00000567811 HDGFP51858 240 aaKnown RBP10.86□□□□□ -0.67
SMPD3-210ENST00000567811 MED14O60244 1454 aa10.86□□□□□ -0.67
SMPD3-210ENST00000567811 NPHP4O75161 1426 aaPredicted RBP10.85□□□□□ -0.67
SMPD3-210ENST00000567811 NOS1P29475 1434 aa10.84□□□□□ -0.67
SMPD3-210ENST00000567811 PIK3C2BO00750 1634 aa10.84□□□□□ -0.67
SMPD3-210ENST00000567811 TET3O43151 1660 aa10.83□□□□□ -0.68
SMPD3-210ENST00000567811 GCC2Q8IWJ2 1684 aa10.83□□□□□ -0.68
SMPD3-210ENST00000567811 NEURL4Q96JN8 1562 aa10.83□□□□□ -0.68
SMPD3-210ENST00000567811 IQSEC2Q5JU85 1478 aa10.83□□□□□ -0.68
SMPD3-210ENST00000567811 RPRD2Q5VT52 1461 aaKnown RBP10.83□□□□□ -0.68
SMPD3-210ENST00000567811 TMEM2Q9UHN6 1383 aa10.83□□□□□ -0.68
SMPD3-210ENST00000567811 UBAP1LF5GYI3 381 aa10.83□□□□□ -0.68
SMPD3-210ENST00000567811 CHGAP10645 457 aaKnown RBP10.83□□□□□ -0.68
SMPD3-210ENST00000567811 TRIM52Q96A61 297 aa10.82□□□□□ -0.68
SMPD3-210ENST00000567811 BCANQ96GW7 911 aa10.82□□□□□ -0.68
SMPD3-210ENST00000567811 EFCAB6Q5THR3 1501 aa10.82□□□□□ -0.68
SMPD3-210ENST00000567811 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
SMPD3-210ENST00000567811 IQGAP1P46940 1657 aa10.82□□□□□ -0.68
SMPD3-210ENST00000567811 UNC13BO14795 1591 aa10.82□□□□□ -0.68
SMPD3-210ENST00000567811 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
SMPD3-210ENST00000567811 SLIT1O75093 1534 aa10.81□□□□□ -0.68
SMPD3-210ENST00000567811 TOM1O60784 492 aa10.81□□□□□ -0.68
SMPD3-210ENST00000567811 MYO5BQ9ULV0 1848 aa10.81□□□□□ -0.68
SMPD3-210ENST00000567811 SYNMO15061 1565 aa10.81□□□□□ -0.68
SMPD3-210ENST00000567811 SCAF11Q99590 1463 aaKnown RBP10.81□□□□□ -0.68
SMPD3-210ENST00000567811 E9PCH4 1651 aa10.8□□□□□ -0.68
SMPD3-210ENST00000567811 IQGAP3Q86VI3 1631 aa10.8□□□□□ -0.68
SMPD3-210ENST00000567811 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMPD3-210ENST00000567811 SLC26A8Q96RN1 970 aa10.79□□□□□ -0.68
SMPD3-210ENST00000567811 CPS1P31327 1500 aa10.79□□□□□ -0.68
SMPD3-210ENST00000567811 NAIPQ13075 1403 aa10.78□□□□□ -0.68
SMPD3-210ENST00000567811 PPP1R15AO75807 674 aaPredicted RBP10.77□□□□□ -0.69
SMPD3-210ENST00000567811 KCNA6P17658 529 aa10.77□□□□□ -0.69
SMPD3-210ENST00000567811 STRCP1A6NGW2 1772 aa10.77□□□□□ -0.69
SMPD3-210ENST00000567811 PIP4K2BP78356 416 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms