RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 ILDR2Q71H61 639 aa36.66■■■■□ 3.46
CNEP1R1-209ENST00000567712 LOC105371045A0A1W2PR82 267 aa36.64■■■■□ 3.46
CNEP1R1-209ENST00000567712 ARHGEF5Q12774 1597 aa36.64■■■■□ 3.46
CNEP1R1-209ENST00000567712 KDM5DQ9BY66 1539 aa36.62■■■■□ 3.45
CNEP1R1-209ENST00000567712 RSPH4AQ5TD94 716 aa36.61■■■■□ 3.45
CNEP1R1-209ENST00000567712 PZPP20742 1482 aa36.6■■■■□ 3.45
CNEP1R1-209ENST00000567712 LRRC9Q6ZRR7 1453 aa36.59■■■■□ 3.45
CNEP1R1-209ENST00000567712 TNRQ92752 1358 aa36.59■■■■□ 3.45
CNEP1R1-209ENST00000567712 VPS8Q8N3P4 1428 aa36.57■■■■□ 3.44
CNEP1R1-209ENST00000567712 NEURL4Q96JN8 1562 aa36.56■■■■□ 3.44
CNEP1R1-209ENST00000567712 POLR1AO95602 1720 aaPredicted RBP36.55■■■■□ 3.44
CNEP1R1-209ENST00000567712 WASHC2CQ9Y4E1 1318 aa36.55■■■■□ 3.44
CNEP1R1-209ENST00000567712 FAM135AQ9P2D6 1515 aa36.54■■■■□ 3.44
CNEP1R1-209ENST00000567712 KANK4Q5T7N3 995 aaPredicted RBP36.53■■■■□ 3.44
CNEP1R1-209ENST00000567712 SPATA31D1Q6ZQQ2 1576 aa36.52■■■■□ 3.44
CNEP1R1-209ENST00000567712 UBAP1LF5GYI3 381 aa36.5■■■■□ 3.43
CNEP1R1-209ENST00000567712 TSPY4P0CV99 314 aa36.5■■■■□ 3.43
CNEP1R1-209ENST00000567712 TSPY10P0CW01 314 aa36.5■■■■□ 3.43
CNEP1R1-209ENST00000567712 MAST1Q9Y2H9 1570 aa36.47■■■■□ 3.43
CNEP1R1-209ENST00000567712 RNF17Q9BXT8 1623 aaKnown RBP36.46■■■■□ 3.43
CNEP1R1-209ENST00000567712 MIA2Q96PC5 1412 aa36.46■■■■□ 3.43
CNEP1R1-209ENST00000567712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.45■■■■□ 3.43
CNEP1R1-209ENST00000567712 ABCC3O15438 1527 aa36.4■■■■□ 3.42
CNEP1R1-209ENST00000567712 MROH1Q8NDA8 1641 aa36.4■■■■□ 3.42
CNEP1R1-209ENST00000567712 CFAP65Q6ZU64 1925 aaKnown RBP36.39■■■■□ 3.42
CNEP1R1-209ENST00000567712 MAP3K1Q13233 1512 aa36.39■■■■□ 3.42
CNEP1R1-209ENST00000567712 NLRP1Q9C000 1473 aa36.38■■■■□ 3.41
CNEP1R1-209ENST00000567712 UGGT1Q9NYU2 1555 aa36.38■■■■□ 3.41
CNEP1R1-209ENST00000567712 MYOM3Q5VTT5 1437 aa36.36■■■■□ 3.41
CNEP1R1-209ENST00000567712 SHANK2Q9UPX8 1470 aa36.36■■■■□ 3.41
CNEP1R1-209ENST00000567712 EIF2AK4Q9P2K8 1649 aaKnown RBP36.35■■■■□ 3.41
CNEP1R1-209ENST00000567712 ANKLE2Q86XL3 938 aa36.35■■■■□ 3.41
CNEP1R1-209ENST00000567712 CEP152O94986 1710 aa36.34■■■■□ 3.41
CNEP1R1-209ENST00000567712 THEMISQ8N1K5 641 aaPredicted RBP36.34■■■■□ 3.41
CNEP1R1-209ENST00000567712 VWDEQ8N2E2 1590 aa36.34■■■■□ 3.41
CNEP1R1-209ENST00000567712 ZC3H13Q5T200 1668 aaKnown RBP36.34■■■■□ 3.41
CNEP1R1-209ENST00000567712 DEPDC5O75140 1603 aa36.31■■■■□ 3.4
CNEP1R1-209ENST00000567712 SOCS7O14512 581 aa36.31■■■■□ 3.4
CNEP1R1-209ENST00000567712 CPS1P31327 1500 aa36.3■■■■□ 3.4
CNEP1R1-209ENST00000567712 MED14O60244 1454 aa36.3■■■■□ 3.4
CNEP1R1-209ENST00000567712 NPHP4O75161 1426 aaPredicted RBP36.28■■■■□ 3.4
CNEP1R1-209ENST00000567712 ERVK-7P63135 1459 aa36.28■■■■□ 3.4
CNEP1R1-209ENST00000567712 STRCP1A6NGW2 1772 aa36.25■■■■□ 3.39
CNEP1R1-209ENST00000567712 IQGAP1P46940 1657 aa36.25■■■■□ 3.39
CNEP1R1-209ENST00000567712 DUOX2Q9NRD8 1548 aa36.23■■■■□ 3.39
CNEP1R1-209ENST00000567712 CROCC2H7BZ55 1655 aa36.21■■■■□ 3.39
CNEP1R1-209ENST00000567712 PIP4K2BP78356 416 aa36.21■■■■□ 3.39
CNEP1R1-209ENST00000567712 ALKQ9UM73 1620 aa36.2■■■■□ 3.39
CNEP1R1-209ENST00000567712 ABCC5O15440 1437 aa36.2■■■■□ 3.39
CNEP1R1-209ENST00000567712 HSPA1LP34931 641 aa36.2■■■■□ 3.39
CNEP1R1-209ENST00000567712 UBR1Q8IWV7 1749 aa36.2■■■■□ 3.38
CNEP1R1-209ENST00000567712 SCAF1Q9H7N4 1312 aaKnown RBP36.18■■■■□ 3.38
CNEP1R1-209ENST00000567712 PTPN23Q9H3S7 1636 aa36.17■■■■□ 3.38
CNEP1R1-209ENST00000567712 KIF15Q9NS87 1388 aa36.15■■■■□ 3.38
CNEP1R1-209ENST00000567712 TOM1O60784 492 aa36.14■■■■□ 3.38
CNEP1R1-209ENST00000567712 RRP7BPQ9NSQ0 103 aa36.14■■■■□ 3.38
CNEP1R1-209ENST00000567712 PRDM15P57071 1507 aaPredicted RBP36.13■■■■□ 3.38
CNEP1R1-209ENST00000567712 DAPK1P53355 1430 aa36.08■■■■□ 3.37
CNEP1R1-209ENST00000567712 ERBINQ96RT1 1412 aa36.08■■■■□ 3.37
CNEP1R1-209ENST00000567712 LRRC7Q96NW7 1537 aa36.07■■■■□ 3.36
CNEP1R1-209ENST00000567712 LTKP29376 864 aa36.06■■■■□ 3.36
CNEP1R1-209ENST00000567712 ARHGAP31Q2M1Z3 1444 aa36.06■■■■□ 3.36
CNEP1R1-209ENST00000567712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.04■■■■□ 3.36
CNEP1R1-209ENST00000567712 FGD6Q6ZV73 1430 aa36.03■■■■□ 3.36
CNEP1R1-209ENST00000567712 SCAF11Q99590 1463 aaKnown RBP36.03■■■■□ 3.36
CNEP1R1-209ENST00000567712 ARHGAP23Q9P227 1491 aa36.03■■■■□ 3.36
CNEP1R1-209ENST00000567712 MED1Q15648 1581 aaPredicted RBP36.02■■■■□ 3.36
CNEP1R1-209ENST00000567712 SLIT1O75093 1534 aa36.01■■■■□ 3.36
CNEP1R1-209ENST00000567712 PIK3C2BO00750 1634 aa36■■■■□ 3.35
CNEP1R1-209ENST00000567712 CHIC2Q9UKJ5 165 aa35.98■■■■□ 3.35
CNEP1R1-209ENST00000567712 APLP2Q06481 763 aa35.97■■■■□ 3.35
CNEP1R1-209ENST00000567712 TXNDC2Q86VQ3 553 aa35.97■■■■□ 3.35
CNEP1R1-209ENST00000567712 SYNMO15061 1565 aa35.97■■■■□ 3.35
CNEP1R1-209ENST00000567712 XIRP1Q702N8 1843 aaKnown RBP35.95■■■■□ 3.35
CNEP1R1-209ENST00000567712 SENP3Q9H4L4 574 aaPredicted RBP35.9■■■■□ 3.34
CNEP1R1-209ENST00000567712 LMTK2Q8IWU2 1503 aa35.88■■■■□ 3.33
CNEP1R1-209ENST00000567712 ANKRD30AQ9BXX3 1397 aa35.88■■■■□ 3.33
CNEP1R1-209ENST00000567712 KANK1Q14678 1352 aa35.87■■■■□ 3.33
CNEP1R1-209ENST00000567712 TMEM2Q9UHN6 1383 aa35.87■■■■□ 3.33
CNEP1R1-209ENST00000567712 IDI1Q13907 227 aa35.86■■■■□ 3.33
CNEP1R1-209ENST00000567712 EID1Q9Y6B2 187 aa35.82■■■■□ 3.32
CNEP1R1-209ENST00000567712 KDM5AP29375 1690 aaKnown RBP35.81■■■■□ 3.32
CNEP1R1-209ENST00000567712 EFCAB6Q5THR3 1501 aa35.81■■■■□ 3.32
CNEP1R1-209ENST00000567712 NOS1P29475 1434 aa35.79■■■■□ 3.32
CNEP1R1-209ENST00000567712 ADGRL2O95490 1459 aa35.79■■■■□ 3.32
CNEP1R1-209ENST00000567712 STAG3Q9UJ98 1225 aa35.78■■■■□ 3.32
CNEP1R1-209ENST00000567712 TET3O43151 1660 aa35.75■■■■□ 3.31
CNEP1R1-209ENST00000567712 FAM50AQ14320 339 aaKnown RBP35.71■■■■□ 3.31
CNEP1R1-209ENST00000567712 ADGRB3O60242 1522 aa35.7■■■■□ 3.31
CNEP1R1-209ENST00000567712 MYO5BQ9ULV0 1848 aa35.7■■■■□ 3.31
CNEP1R1-209ENST00000567712 SLC26A8Q96RN1 970 aa35.69■■■■□ 3.3
CNEP1R1-209ENST00000567712 ANKRD50Q9ULJ7 1429 aa35.66■■■■□ 3.3
CNEP1R1-209ENST00000567712 TMEM94Q12767 1356 aa35.65■■■■□ 3.3
CNEP1R1-209ENST00000567712 RBM33Q96EV2 1170 aaKnown RBP35.65■■■■□ 3.3
CNEP1R1-209ENST00000567712 KCNA6P17658 529 aa35.64■■■■□ 3.3
CNEP1R1-209ENST00000567712 PHF23Q9BUL5 403 aaPredicted RBP35.64■■■■□ 3.3
CNEP1R1-209ENST00000567712 SLC52A1Q9NWF4 448 aa35.6■■■■□ 3.29
CNEP1R1-209ENST00000567712 RPRD2Q5VT52 1461 aaKnown RBP35.58■■■■□ 3.29
CNEP1R1-209ENST00000567712 GCC2Q8IWJ2 1684 aa35.58■■■■□ 3.29
CNEP1R1-209ENST00000567712 NWD1Q149M9 1564 aa35.57■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms