RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 ZNF142P52746 1687 aaPredicted RBP24.12■■□□□ 1.45
CDR2-206ENST00000567406 ZNF335Q9H4Z2 1342 aaPredicted RBP24.1■■□□□ 1.45
CDR2-206ENST00000567406 MAP3K1Q13233 1512 aa24.09■■□□□ 1.45
CDR2-206ENST00000567406 PKD2Q13563 968 aa24.08■■□□□ 1.45
CDR2-206ENST00000567406 KDM5DQ9BY66 1539 aa24.08■■□□□ 1.45
CDR2-206ENST00000567406 MYOM3Q5VTT5 1437 aa24.08■■□□□ 1.44
CDR2-206ENST00000567406 TNRQ92752 1358 aa24.07■■□□□ 1.44
CDR2-206ENST00000567406 A2ML1A8K2U0 1454 aa24.07■■□□□ 1.44
CDR2-206ENST00000567406 PLA2R1Q13018 1463 aa24.06■■□□□ 1.44
CDR2-206ENST00000567406 TCOF1Q13428 1488 aaKnown RBP24.06■■□□□ 1.44
CDR2-206ENST00000567406 DNMT1P26358 1616 aaKnown RBP24.06■■□□□ 1.44
CDR2-206ENST00000567406 PZPP20742 1482 aa24.05■■□□□ 1.44
CDR2-206ENST00000567406 MIA2Q96PC5 1412 aa24.03■■□□□ 1.44
CDR2-206ENST00000567406 APLP2Q06481 763 aa24.02■■□□□ 1.44
CDR2-206ENST00000567406 MAST1Q9Y2H9 1570 aa24.02■■□□□ 1.44
CDR2-206ENST00000567406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.98■■□□□ 1.43
CDR2-206ENST00000567406 RRP7BPQ9NSQ0 103 aa23.97■■□□□ 1.43
CDR2-206ENST00000567406 RNF17Q9BXT8 1623 aaKnown RBP23.96■■□□□ 1.43
CDR2-206ENST00000567406 FAM135AQ9P2D6 1515 aa23.96■■□□□ 1.43
CDR2-206ENST00000567406 ABCC3O15438 1527 aa23.95■■□□□ 1.43
CDR2-206ENST00000567406 ABCC5O15440 1437 aa23.94■■□□□ 1.42
CDR2-206ENST00000567406 CFAP65Q6ZU64 1925 aaKnown RBP23.94■■□□□ 1.42
CDR2-206ENST00000567406 MROH1Q8NDA8 1641 aa23.93■■□□□ 1.42
CDR2-206ENST00000567406 PTPN23Q9H3S7 1636 aa23.93■■□□□ 1.42
CDR2-206ENST00000567406 UBAP1LF5GYI3 381 aa23.93■■□□□ 1.42
CDR2-206ENST00000567406 IQSEC2Q5JU85 1478 aa23.93■■□□□ 1.42
CDR2-206ENST00000567406 NEURL4Q96JN8 1562 aa23.92■■□□□ 1.42
CDR2-206ENST00000567406 THEMISQ8N1K5 641 aaPredicted RBP23.92■■□□□ 1.42
CDR2-206ENST00000567406 CHIC2Q9UKJ5 165 aa23.92■■□□□ 1.42
CDR2-206ENST00000567406 KIF15Q9NS87 1388 aa23.91■■□□□ 1.42
CDR2-206ENST00000567406 ANKLE2Q86XL3 938 aa23.91■■□□□ 1.42
CDR2-206ENST00000567406 EIF2AK4Q9P2K8 1649 aaKnown RBP23.91■■□□□ 1.42
CDR2-206ENST00000567406 UGGT1Q9NYU2 1555 aa23.91■■□□□ 1.42
CDR2-206ENST00000567406 CEP152O94986 1710 aa23.9■■□□□ 1.42
CDR2-206ENST00000567406 POLR1AO95602 1720 aaPredicted RBP23.9■■□□□ 1.42
CDR2-206ENST00000567406 DUOX2Q9NRD8 1548 aa23.9■■□□□ 1.42
CDR2-206ENST00000567406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.9■■□□□ 1.425e-8■■□□□ 13
CDR2-206ENST00000567406 NLRP1Q9C000 1473 aa23.89■■□□□ 1.42
CDR2-206ENST00000567406 FGD6Q6ZV73 1430 aa23.88■■□□□ 1.41
CDR2-206ENST00000567406 DISP3Q9P2K9 1392 aa23.88■■□□□ 1.41
CDR2-206ENST00000567406 ERVK-7P63135 1459 aa23.87■■□□□ 1.41
CDR2-206ENST00000567406 DAPK1P53355 1430 aa23.87■■□□□ 1.41
CDR2-206ENST00000567406 SPATA31D1Q6ZQQ2 1576 aa23.86■■□□□ 1.41
CDR2-206ENST00000567406 CROCC2H7BZ55 1655 aa23.86■■□□□ 1.41
CDR2-206ENST00000567406 ZC3H13Q5T200 1668 aaKnown RBP23.86■■□□□ 1.41
CDR2-206ENST00000567406 SHANK2Q9UPX8 1470 aa23.84■■□□□ 1.41
CDR2-206ENST00000567406 NPHP4O75161 1426 aaPredicted RBP23.83■■□□□ 1.4
CDR2-206ENST00000567406 ILDR2Q71H61 639 aa23.81■■□□□ 1.4
CDR2-206ENST00000567406 ERBINQ96RT1 1412 aa23.81■■□□□ 1.4
CDR2-206ENST00000567406 FAM50AQ14320 339 aaKnown RBP23.79■■□□□ 1.4
CDR2-206ENST00000567406 SCAF1Q9H7N4 1312 aaKnown RBP23.79■■□□□ 1.4
CDR2-206ENST00000567406 PIP4K2BP78356 416 aa23.78■■□□□ 1.4
CDR2-206ENST00000567406 PRDM15P57071 1507 aaPredicted RBP23.78■■□□□ 1.4
CDR2-206ENST00000567406 VWDEQ8N2E2 1590 aa23.78■■□□□ 1.4
CDR2-206ENST00000567406 MED14O60244 1454 aa23.77■■□□□ 1.4
CDR2-206ENST00000567406 DEPDC5O75140 1603 aa23.77■■□□□ 1.4
CDR2-206ENST00000567406 ANKRD30AQ9BXX3 1397 aa23.77■■□□□ 1.4
CDR2-206ENST00000567406 CPS1P31327 1500 aa23.74■■□□□ 1.39
CDR2-206ENST00000567406 IQGAP1P46940 1657 aa23.74■■□□□ 1.39
CDR2-206ENST00000567406 UBR1Q8IWV7 1749 aa23.74■■□□□ 1.39
CDR2-206ENST00000567406 LTKP29376 864 aa23.74■■□□□ 1.39
CDR2-206ENST00000567406 ARHGAP31Q2M1Z3 1444 aa23.74■■□□□ 1.39
CDR2-206ENST00000567406 KANK1Q14678 1352 aa23.72■■□□□ 1.39
CDR2-206ENST00000567406 TXNDC2Q86VQ3 553 aa23.71■■□□□ 1.39
CDR2-206ENST00000567406 TOM1O60784 492 aa23.7■■□□□ 1.38
CDR2-206ENST00000567406 STRCP1A6NGW2 1772 aa23.7■■□□□ 1.38
CDR2-206ENST00000567406 HSPA1LP34931 641 aa23.69■■□□□ 1.38
CDR2-206ENST00000567406 IDI1Q13907 227 aa23.67■■□□□ 1.38
CDR2-206ENST00000567406 STAG3Q9UJ98 1225 aa23.67■■□□□ 1.38
CDR2-206ENST00000567406 SCAF11Q99590 1463 aaKnown RBP23.67■■□□□ 1.38
CDR2-206ENST00000567406 PIK3C2BO00750 1634 aa23.66■■□□□ 1.38
CDR2-206ENST00000567406 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
CDR2-206ENST00000567406 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
CDR2-206ENST00000567406 ADGRL2O95490 1459 aa23.64■■□□□ 1.38
CDR2-206ENST00000567406 ARHGAP23Q9P227 1491 aa23.64■■□□□ 1.38
CDR2-206ENST00000567406 EID1Q9Y6B2 187 aa23.63■■□□□ 1.37
CDR2-206ENST00000567406 SLIT1O75093 1534 aa23.63■■□□□ 1.37
CDR2-206ENST00000567406 LMTK2Q8IWU2 1503 aa23.63■■□□□ 1.37
CDR2-206ENST00000567406 LRRC7Q96NW7 1537 aa23.63■■□□□ 1.37
CDR2-206ENST00000567406 ALKQ9UM73 1620 aa23.62■■□□□ 1.37
CDR2-206ENST00000567406 TMEM2Q9UHN6 1383 aa23.61■■□□□ 1.37
CDR2-206ENST00000567406 SYNMO15061 1565 aa23.61■■□□□ 1.37
CDR2-206ENST00000567406 ANKRD50Q9ULJ7 1429 aa23.6■■□□□ 1.37
CDR2-206ENST00000567406 EFCAB6Q5THR3 1501 aa23.58■■□□□ 1.36
CDR2-206ENST00000567406 NOS1P29475 1434 aa23.57■■□□□ 1.36
CDR2-206ENST00000567406 ITGAEP38570 1179 aa23.56■■□□□ 1.36
CDR2-206ENST00000567406 SLC26A8Q96RN1 970 aa23.55■■□□□ 1.36
CDR2-206ENST00000567406 SOCS7O14512 581 aa23.54■■□□□ 1.36
CDR2-206ENST00000567406 RBM33Q96EV2 1170 aaKnown RBP23.52■■□□□ 1.36
CDR2-206ENST00000567406 SLC52A1Q9NWF4 448 aa23.5■■□□□ 1.35
CDR2-206ENST00000567406 BCANQ96GW7 911 aa23.49■■□□□ 1.35
CDR2-206ENST00000567406 ADGRB3O60242 1522 aa23.49■■□□□ 1.35
CDR2-206ENST00000567406 XIRP1Q702N8 1843 aaKnown RBP23.48■■□□□ 1.35
CDR2-206ENST00000567406 KDM5AP29375 1690 aaKnown RBP23.48■■□□□ 1.35
CDR2-206ENST00000567406 TET3O43151 1660 aa23.46■■□□□ 1.35
CDR2-206ENST00000567406 CHGAP10645 457 aaKnown RBP23.46■■□□□ 1.35
CDR2-206ENST00000567406 MYO5BQ9ULV0 1848 aa23.45■■□□□ 1.34
CDR2-206ENST00000567406 MED1Q15648 1581 aaPredicted RBP23.45■■□□□ 1.34
CDR2-206ENST00000567406 KCNA6P17658 529 aa23.45■■□□□ 1.34
CDR2-206ENST00000567406 RPRD2Q5VT52 1461 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms