RNA–Protein interactions for RNA: ENST00000567285.1

CNOT1-212, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-212ENST00000567285 KIF3CO14782 793 aa11.93□□□□□ -0.5
CNOT1-212ENST00000567285 NUP160Q12769 1436 aa11.92□□□□□ -0.5
CNOT1-212ENST00000567285 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
CNOT1-212ENST00000567285 CRISPLD2Q9H0B8 497 aa11.9□□□□□ -0.5
CNOT1-212ENST00000567285 SHROOM2Q13796 1616 aa11.89□□□□□ -0.51
CNOT1-212ENST00000567285 COL17A1Q9UMD9 1497 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-212ENST00000567285 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
CNOT1-212ENST00000567285 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
CNOT1-212ENST00000567285 ADCY10Q96PN6 1610 aa11.86□□□□□ -0.51
CNOT1-212ENST00000567285 HSPA2P54652 639 aa11.86□□□□□ -0.51
CNOT1-212ENST00000567285 DSG2Q14126 1118 aa11.85□□□□□ -0.51
CNOT1-212ENST00000567285 HAP1P54257 671 aaPredicted RBP11.84□□□□□ -0.51
CNOT1-212ENST00000567285 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
CNOT1-212ENST00000567285 PDE4AP27815 886 aa11.82□□□□□ -0.52
CNOT1-212ENST00000567285 FHAD1B1AJZ9 1412 aa11.81□□□□□ -0.52
CNOT1-212ENST00000567285 HOXB3P14651 431 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-212ENST00000567285 FOXK1P85037 733 aa11.8□□□□□ -0.52
CNOT1-212ENST00000567285 TEX14Q8IWB6 1497 aa11.8□□□□□ -0.52
CNOT1-212ENST00000567285 CUX1P39880 1505 aa11.8□□□□□ -0.52
CNOT1-212ENST00000567285 ASXL2Q76L83 1435 aa11.79□□□□□ -0.52
CNOT1-212ENST00000567285 PTPRMP28827 1452 aa11.79□□□□□ -0.52
CNOT1-212ENST00000567285 MFSD10Q14728 455 aa11.79□□□□□ -0.52
CNOT1-212ENST00000567285 PLPP6Q8IY26 295 aa11.79□□□□□ -0.52
CNOT1-212ENST00000567285 PLB1Q6P1J6 1458 aa11.78□□□□□ -0.52
CNOT1-212ENST00000567285 PCF11O94913 1555 aaKnown RBP11.77□□□□□ -0.53
CNOT1-212ENST00000567285 PPP1R15BQ5SWA1 713 aa11.77□□□□□ -0.53
CNOT1-212ENST00000567285 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.53
CNOT1-212ENST00000567285 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.53
CNOT1-212ENST00000567285 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
CNOT1-212ENST00000567285 ADAMTS12P58397 1594 aa11.76□□□□□ -0.53
CNOT1-212ENST00000567285 ABCA5Q8WWZ7 1642 aa11.75□□□□□ -0.53
CNOT1-212ENST00000567285 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
CNOT1-212ENST00000567285 PTPRGP23470 1445 aa11.75□□□□□ -0.53
CNOT1-212ENST00000567285 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
CNOT1-212ENST00000567285 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
CNOT1-212ENST00000567285 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
CNOT1-212ENST00000567285 GLI2P10070 1586 aa11.74□□□□□ -0.53
CNOT1-212ENST00000567285 SNPHO15079 494 aa11.71□□□□□ -0.53
CNOT1-212ENST00000567285 ST18O60284 1047 aa11.7□□□□□ -0.54
CNOT1-212ENST00000567285 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
CNOT1-212ENST00000567285 ABCC2Q92887 1545 aa11.69□□□□□ -0.54
CNOT1-212ENST00000567285 KIF21BO75037 1637 aa11.68□□□□□ -0.54
CNOT1-212ENST00000567285 EMILIN3Q9NT22 766 aa11.68□□□□□ -0.54
CNOT1-212ENST00000567285 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.549e-8■■■□□ 15.7
CNOT1-212ENST00000567285 EPRSP07814 1512 aaKnown RBP11.66□□□□□ -0.54
CNOT1-212ENST00000567285 SLC34A2O95436 690 aa11.66□□□□□ -0.54
CNOT1-212ENST00000567285 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.54
CNOT1-212ENST00000567285 WRNQ14191 1432 aaPredicted RBP eCLIP11.66□□□□□ -0.54
CNOT1-212ENST00000567285 ARSIQ5FYB1 569 aa11.65□□□□□ -0.54
CNOT1-212ENST00000567285 GPR153Q6NV75 609 aa11.65□□□□□ -0.54
CNOT1-212ENST00000567285 ZNF710Q8N1W2 664 aa11.65□□□□□ -0.54
CNOT1-212ENST00000567285 KCNH8Q96L42 1107 aa11.65□□□□□ -0.54
CNOT1-212ENST00000567285 WDR70Q9NW82 654 aa11.65□□□□□ -0.54
CNOT1-212ENST00000567285 CAMK2BQ13554 666 aa11.64□□□□□ -0.55
CNOT1-212ENST00000567285 MAP3K4Q9Y6R4 1608 aa11.64□□□□□ -0.55
CNOT1-212ENST00000567285 OXER1Q8TDS5 423 aa11.63□□□□□ -0.55
CNOT1-212ENST00000567285 PTCD2Q8WV60 388 aaKnown RBP11.63□□□□□ -0.55
CNOT1-212ENST00000567285 PCDHGA4Q9Y5G9 962 aa11.63□□□□□ -0.55
CNOT1-212ENST00000567285 MARVELD3Q96A59 401 aa11.62□□□□□ -0.55
CNOT1-212ENST00000567285 E2F4Q16254 413 aa11.61□□□□□ -0.55
CNOT1-212ENST00000567285 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
CNOT1-212ENST00000567285 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
CNOT1-212ENST00000567285 RUSC2Q8N2Y8 1516 aa11.6□□□□□ -0.55
CNOT1-212ENST00000567285 KIAA0586Q9BVV6 1533 aa11.6□□□□□ -0.55
CNOT1-212ENST00000567285 ADAMTSL3P82987 1691 aa11.6□□□□□ -0.55
CNOT1-212ENST00000567285 RIMBP2O15034 1052 aa11.6□□□□□ -0.55
CNOT1-212ENST00000567285 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-212ENST00000567285 TNIKQ9UKE5 1360 aa11.59□□□□□ -0.55
CNOT1-212ENST00000567285 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
CNOT1-212ENST00000567285 ERICH3Q5RHP9 1530 aa11.59□□□□□ -0.55
CNOT1-212ENST00000567285 UBAP1LF5GYI3 381 aa11.58□□□□□ -0.56
CNOT1-212ENST00000567285 CARMIL2Q6F5E8 1435 aa11.58□□□□□ -0.56
CNOT1-212ENST00000567285 CUL7Q14999 1698 aa11.58□□□□□ -0.56
CNOT1-212ENST00000567285 NUDT7P0C024 238 aa11.57□□□□□ -0.56
CNOT1-212ENST00000567285 KCNV2Q8TDN2 545 aa11.57□□□□□ -0.56
CNOT1-212ENST00000567285 DPYSL4O14531 572 aa11.56□□□□□ -0.56
CNOT1-212ENST00000567285 UACAQ9BZF9 1416 aa11.56□□□□□ -0.56
CNOT1-212ENST00000567285 RAPGEF3O95398 923 aa11.55□□□□□ -0.56
CNOT1-212ENST00000567285 MADDQ8WXG6 1647 aa11.55□□□□□ -0.56
CNOT1-212ENST00000567285 YEATS2Q9ULM3 1422 aa11.53□□□□□ -0.56
CNOT1-212ENST00000567285 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
CNOT1-212ENST00000567285 UHRF1BP1LA0JNW5 1464 aa11.52□□□□□ -0.56
CNOT1-212ENST00000567285 SLC24A1O60721 1099 aa11.52□□□□□ -0.57
CNOT1-212ENST00000567285 EMP3P54852 163 aa11.52□□□□□ -0.57
CNOT1-212ENST00000567285 MAGI3Q5TCQ9 1506 aa11.51□□□□□ -0.57
CNOT1-212ENST00000567285 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
CNOT1-212ENST00000567285 TBC1D12O60347 775 aa11.51□□□□□ -0.57
CNOT1-212ENST00000567285 MLECQ14165 292 aa11.51□□□□□ -0.57
CNOT1-212ENST00000567285 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
CNOT1-212ENST00000567285 RIMS1Q86UR5 1692 aaKnown RBP11.49□□□□□ -0.57
CNOT1-212ENST00000567285 EVI5O60447 810 aa11.49□□□□□ -0.57
CNOT1-212ENST00000567285 WDR7Q9Y4E6 1490 aa11.49□□□□□ -0.57
CNOT1-212ENST00000567285 BCORL1Q5H9F3 1711 aa11.49□□□□□ -0.57
CNOT1-212ENST00000567285 FAM205CA6NFA0 338 aa11.48□□□□□ -0.57
CNOT1-212ENST00000567285 POTEGQ6S5H5 508 aa11.48□□□□□ -0.57
CNOT1-212ENST00000567285 LHX6Q9UPM6 363 aa11.48□□□□□ -0.57
CNOT1-212ENST00000567285 ARIH1Q9Y4X5 557 aaPredicted RBP11.48□□□□□ -0.57
CNOT1-212ENST00000567285 KDM5BQ9UGL1 1544 aa11.48□□□□□ -0.57
CNOT1-212ENST00000567285 POTEMA6NI47 508 aa11.47□□□□□ -0.57
CNOT1-212ENST00000567285 ARAP3Q8WWN8 1544 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms